RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
SEC61A2-213ENST00000475268 CCDC180Q9P1Z9 1646 aa35.03■■■■□ 3.2
SEC61A2-213ENST00000475268 ZCCHC6Q5VYS8 1495 aaKnown RBP34.08■■■■□ 3.05
SEC61A2-213ENST00000475268 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
SEC61A2-213ENST00000475268 SHROOM4Q9ULL8 1493 aa33.53■■■□□ 2.96
SEC61A2-213ENST00000475268 DCAF1Q9Y4B6 1507 aa33.38■■■□□ 2.93
SEC61A2-213ENST00000475268 ABCC9O60706 1549 aa33.03■■■□□ 2.88
SEC61A2-213ENST00000475268 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.84
SEC61A2-213ENST00000475268 NACADO15069 1562 aa32.59■■■□□ 2.81
SEC61A2-213ENST00000475268 SCRIBQ14160 1630 aa32.45■■■□□ 2.79
SEC61A2-213ENST00000475268 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.79
SEC61A2-213ENST00000475268 RB1CC1Q8TDY2 1594 aa32.25■■■□□ 2.75
SEC61A2-213ENST00000475268 UNC13AQ9UPW8 1703 aa31.63■■■□□ 2.65
SEC61A2-213ENST00000475268 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
SEC61A2-213ENST00000475268 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
SEC61A2-213ENST00000475268 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
SEC61A2-213ENST00000475268 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
SEC61A2-213ENST00000475268 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
SEC61A2-213ENST00000475268 BAZ1AQ9NRL2 1556 aaPredicted RBP31.23■■■□□ 2.59
SEC61A2-213ENST00000475268 CHIC1Q5VXU3 224 aa31.16■■■□□ 2.58
SEC61A2-213ENST00000475268 WIZO95785 1651 aa31.13■■■□□ 2.57
SEC61A2-213ENST00000475268 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
SEC61A2-213ENST00000475268 TOP2AP11388 1531 aaKnown RBP30.74■■■□□ 2.51
SEC61A2-213ENST00000475268 PEG3Q9GZU2 1588 aa30.58■■■□□ 2.49
SEC61A2-213ENST00000475268 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
SEC61A2-213ENST00000475268 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
SEC61A2-213ENST00000475268 ATAD2BQ9ULI0 1458 aa30.47■■■□□ 2.47
SEC61A2-213ENST00000475268 TRIM41Q8WV44 630 aa30.41■■■□□ 2.46
SEC61A2-213ENST00000475268 EIF4G1Q04637 1599 aaKnown RBP30.34■■■□□ 2.45
SEC61A2-213ENST00000475268 BAZ1BQ9UIG0 1483 aaKnown RBP30.34■■■□□ 2.45
SEC61A2-213ENST00000475268 NCAPD3P42695 1498 aa30.1■■■□□ 2.41
SEC61A2-213ENST00000475268 LOC105371045A0A1W2PR82 267 aa30.08■■■□□ 2.41
SEC61A2-213ENST00000475268 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
SEC61A2-213ENST00000475268 ABCC8Q09428 1581 aa30.03■■■□□ 2.4
SEC61A2-213ENST00000475268 FAM9AQ8IZU1 332 aaPredicted RBP29.97■■■□□ 2.39
SEC61A2-213ENST00000475268 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
SEC61A2-213ENST00000475268 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
SEC61A2-213ENST00000475268 EHMT2Q96KQ7 1210 aa29.64■■■□□ 2.34
SEC61A2-213ENST00000475268 SYNJ1O43426 1573 aa29.61■■■□□ 2.33
SEC61A2-213ENST00000475268 CFTRP13569 1480 aa29.56■■■□□ 2.32
SEC61A2-213ENST00000475268 SOGA1O94964 1423 aa29.56■■■□□ 2.32
SEC61A2-213ENST00000475268 RUSC2Q8N2Y8 1516 aa29.43■■■□□ 2.3
SEC61A2-213ENST00000475268 EEA1Q15075 1411 aa29.43■■■□□ 2.3
SEC61A2-213ENST00000475268 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
SEC61A2-213ENST00000475268 TOP2BQ02880 1626 aa29.4■■■□□ 2.3
SEC61A2-213ENST00000475268 CSRNP3Q8WYN3 585 aa29.36■■■□□ 2.29
SEC61A2-213ENST00000475268 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
SEC61A2-213ENST00000475268 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
SEC61A2-213ENST00000475268 CUX1P39880 1505 aa29.28■■■□□ 2.28
SEC61A2-213ENST00000475268 DNAJC5BQ9UF47 199 aa29.12■■■□□ 2.25
SEC61A2-213ENST00000475268 NESP48681 1621 aa29.11■■■□□ 2.25
SEC61A2-213ENST00000475268 FANCD2Q9BXW9 1451 aa29.11■■■□□ 2.25
SEC61A2-213ENST00000475268 GOLGA3Q08378 1498 aa29.1■■■□□ 2.25
SEC61A2-213ENST00000475268 PCGF6Q9BYE7 350 aa29.1■■■□□ 2.25
SEC61A2-213ENST00000475268 UBTFP17480 764 aaKnown RBP29.09■■■□□ 2.25
SEC61A2-213ENST00000475268 TNIKQ9UKE5 1360 aa29.08■■■□□ 2.25
SEC61A2-213ENST00000475268 CEP164Q9UPV0 1460 aa29.06■■■□□ 2.24
SEC61A2-213ENST00000475268 KIF21BO75037 1637 aa29.04■■■□□ 2.24
SEC61A2-213ENST00000475268 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
SEC61A2-213ENST00000475268 CEP162Q5TB80 1403 aa29■■■□□ 2.23
SEC61A2-213ENST00000475268 KIF27Q86VH2 1401 aa28.95■■■□□ 2.22
SEC61A2-213ENST00000475268 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
SEC61A2-213ENST00000475268 RAPGEF2Q9Y4G8 1499 aa28.91■■■□□ 2.22
SEC61A2-213ENST00000475268 TRIM26Q12899 539 aaPredicted RBP28.91■■■□□ 2.22
SEC61A2-213ENST00000475268 DNMBPQ6XZF7 1577 aa28.86■■■□□ 2.21
SEC61A2-213ENST00000475268 CUX2O14529 1486 aa28.83■■■□□ 2.21
SEC61A2-213ENST00000475268 PDS5BQ9NTI5 1447 aa28.83■■■□□ 2.21
SEC61A2-213ENST00000475268 PRXQ9BXM0 1461 aa28.82■■■□□ 2.2
SEC61A2-213ENST00000475268 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
SEC61A2-213ENST00000475268 ERICH3Q5RHP9 1530 aa28.77■■■□□ 2.2
SEC61A2-213ENST00000475268 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
SEC61A2-213ENST00000475268 PPARGC1BQ86YN6 1023 aaKnown RBP28.72■■■□□ 2.19
SEC61A2-213ENST00000475268 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
SEC61A2-213ENST00000475268 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
SEC61A2-213ENST00000475268 CLIP1P30622 1438 aa28.69■■■□□ 2.18
SEC61A2-213ENST00000475268 RAD54L2Q9Y4B4 1467 aa28.69■■■□□ 2.18
SEC61A2-213ENST00000475268 IGF1RP08069 1367 aa28.67■■■□□ 2.18
SEC61A2-213ENST00000475268 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
SEC61A2-213ENST00000475268 ABCA10Q8WWZ4 1543 aa28.62■■■□□ 2.17
SEC61A2-213ENST00000475268 CARMIL1Q5VZK9 1371 aa28.54■■■□□ 2.16
SEC61A2-213ENST00000475268 HRCP23327 699 aa28.47■■■□□ 2.15
SEC61A2-213ENST00000475268 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
SEC61A2-213ENST00000475268 WDR97A6NE52 1622 aa28.45■■■□□ 2.15
SEC61A2-213ENST00000475268 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
SEC61A2-213ENST00000475268 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
SEC61A2-213ENST00000475268 TDRD9Q8NDG6 1382 aaKnown RBP28.4■■■□□ 2.14
SEC61A2-213ENST00000475268 ABCA5Q8WWZ7 1642 aa28.34■■■□□ 2.13
SEC61A2-213ENST00000475268 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
SEC61A2-213ENST00000475268 CUL7Q14999 1698 aa28.33■■■□□ 2.13
SEC61A2-213ENST00000475268 TARBP1Q13395 1621 aaKnown RBP28.32■■■□□ 2.12
SEC61A2-213ENST00000475268 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
SEC61A2-213ENST00000475268 APLP2Q06481 763 aa28.28■■■□□ 2.12
SEC61A2-213ENST00000475268 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
SEC61A2-213ENST00000475268 ERCC6Q03468 1493 aa28.26■■■□□ 2.12
SEC61A2-213ENST00000475268 WDR62O43379 1518 aa28.24■■■□□ 2.11
SEC61A2-213ENST00000475268 AQRO60306 1485 aaKnown RBP eCLIP28.14■■■□□ 2.1
SEC61A2-213ENST00000475268 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
SEC61A2-213ENST00000475268 PBRM1Q86U86 1689 aa28.09■■■□□ 2.09
SEC61A2-213ENST00000475268 CTTNBP2Q8WZ74 1663 aa28.08■■■□□ 2.09
SEC61A2-213ENST00000475268 THOC2Q8NI27 1593 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms