RNA–Protein interactions for RNA: ENST00000475225.5

SLC11A1-211, Transcript of solute carrier family 11 member 1, humanhuman

TSL 2

Gene SLC11A1, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1-211ENST00000475225 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
SLC11A1-211ENST00000475225 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
SLC11A1-211ENST00000475225 ABCC9O60706 1549 aa33.95■■■■□ 3.03
SLC11A1-211ENST00000475225 RB1CC1Q8TDY2 1594 aa32.47■■■□□ 2.79
SLC11A1-211ENST00000475225 NACADO15069 1562 aa32.26■■■□□ 2.75
SLC11A1-211ENST00000475225 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
SLC11A1-211ENST00000475225 MYO15BQ96JP2 1530 aa31.84■■■□□ 2.69
SLC11A1-211ENST00000475225 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
SLC11A1-211ENST00000475225 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
SLC11A1-211ENST00000475225 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
SLC11A1-211ENST00000475225 DNAJC5BQ9UF47 199 aa31.57■■■□□ 2.64
SLC11A1-211ENST00000475225 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
SLC11A1-211ENST00000475225 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
SLC11A1-211ENST00000475225 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
SLC11A1-211ENST00000475225 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
SLC11A1-211ENST00000475225 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
SLC11A1-211ENST00000475225 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
SLC11A1-211ENST00000475225 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
SLC11A1-211ENST00000475225 SMARCA4P51532 1647 aa29.73■■■□□ 2.35
SLC11A1-211ENST00000475225 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
SLC11A1-211ENST00000475225 SMARCA2P51531 1590 aa29.65■■■□□ 2.34
SLC11A1-211ENST00000475225 ATAD2BQ9ULI0 1458 aa29.65■■■□□ 2.34
SLC11A1-211ENST00000475225 BAZ1AQ9NRL2 1556 aaPredicted RBP29.61■■■□□ 2.33
SLC11A1-211ENST00000475225 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
SLC11A1-211ENST00000475225 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
SLC11A1-211ENST00000475225 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
SLC11A1-211ENST00000475225 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
SLC11A1-211ENST00000475225 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
SLC11A1-211ENST00000475225 CUX2O14529 1486 aa29.23■■■□□ 2.27
SLC11A1-211ENST00000475225 NESP48681 1621 aa29.2■■■□□ 2.26
SLC11A1-211ENST00000475225 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
SLC11A1-211ENST00000475225 WIZO95785 1651 aa29.06■■■□□ 2.24
SLC11A1-211ENST00000475225 RSF1Q96T23 1441 aaPredicted RBP28.98■■■□□ 2.23
SLC11A1-211ENST00000475225 KIF21AQ7Z4S6 1674 aa28.95■■■□□ 2.22
SLC11A1-211ENST00000475225 THOC2Q8NI27 1593 aaKnown RBP28.94■■■□□ 2.22
SLC11A1-211ENST00000475225 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
SLC11A1-211ENST00000475225 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
SLC11A1-211ENST00000475225 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
SLC11A1-211ENST00000475225 CADPSQ9ULU8 1353 aa28.81■■■□□ 2.2
SLC11A1-211ENST00000475225 TOP2AP11388 1531 aaKnown RBP28.69■■■□□ 2.18
SLC11A1-211ENST00000475225 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
SLC11A1-211ENST00000475225 WDR62O43379 1518 aa28.57■■■□□ 2.16
SLC11A1-211ENST00000475225 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
SLC11A1-211ENST00000475225 CFTRP13569 1480 aa28.53■■■□□ 2.16
SLC11A1-211ENST00000475225 FANCD2Q9BXW9 1451 aa28.52■■■□□ 2.16
SLC11A1-211ENST00000475225 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
SLC11A1-211ENST00000475225 CCDC88BA6NC98 1476 aa28.3■■■□□ 2.12
SLC11A1-211ENST00000475225 URB2Q14146 1524 aaKnown RBP28.25■■■□□ 2.11
SLC11A1-211ENST00000475225 TOPBP1Q92547 1522 aa28■■■□□ 2.07
SLC11A1-211ENST00000475225 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
SLC11A1-211ENST00000475225 IFT140Q96RY7 1462 aa27.97■■■□□ 2.07
SLC11A1-211ENST00000475225 DNMBPQ6XZF7 1577 aa27.95■■■□□ 2.07
SLC11A1-211ENST00000475225 OSCARQ8IYS5 282 aa27.87■■■□□ 2.05
SLC11A1-211ENST00000475225 ZNF608Q9ULD9 1512 aaPredicted RBP27.87■■■□□ 2.05
SLC11A1-211ENST00000475225 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
SLC11A1-211ENST00000475225 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
SLC11A1-211ENST00000475225 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
SLC11A1-211ENST00000475225 POLA1P09884 1462 aaPredicted RBP27.72■■■□□ 2.03
SLC11A1-211ENST00000475225 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.01
SLC11A1-211ENST00000475225 CHD1O14646 1710 aa27.63■■■□□ 2.01
SLC11A1-211ENST00000475225 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
SLC11A1-211ENST00000475225 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
SLC11A1-211ENST00000475225 SOGA1O94964 1423 aa27.58■■■□□ 2
SLC11A1-211ENST00000475225 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
SLC11A1-211ENST00000475225 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
SLC11A1-211ENST00000475225 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
SLC11A1-211ENST00000475225 CUX1P39880 1505 aa27.56■■■□□ 2
SLC11A1-211ENST00000475225 WDR97A6NE52 1622 aa27.55■■■□□ 2
SLC11A1-211ENST00000475225 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
SLC11A1-211ENST00000475225 ARHGEF11O15085 1522 aa27.47■■□□□ 1.99
SLC11A1-211ENST00000475225 FBLN2P98095 1184 aa27.45■■□□□ 1.99
SLC11A1-211ENST00000475225 SNAPC4Q5SXM2 1469 aa27.4■■□□□ 1.98
SLC11A1-211ENST00000475225 PBRM1Q86U86 1689 aa27.37■■□□□ 1.97
SLC11A1-211ENST00000475225 GRIN2BQ13224 1484 aa27.35■■□□□ 1.97
SLC11A1-211ENST00000475225 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
SLC11A1-211ENST00000475225 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
SLC11A1-211ENST00000475225 WRNQ14191 1432 aaPredicted RBP eCLIP27.31■■□□□ 1.96
SLC11A1-211ENST00000475225 SYNJ1O43426 1573 aa27.28■■□□□ 1.96
SLC11A1-211ENST00000475225 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
SLC11A1-211ENST00000475225 ABCA10Q8WWZ4 1543 aa27.27■■□□□ 1.96
SLC11A1-211ENST00000475225 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
SLC11A1-211ENST00000475225 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
SLC11A1-211ENST00000475225 BIVM-ERCC5R4GMW8 1640 aa27.25■■□□□ 1.95
SLC11A1-211ENST00000475225 SYNJ2O15056 1496 aa27.24■■□□□ 1.95
SLC11A1-211ENST00000475225 CLASP1Q7Z460 1538 aa27.22■■□□□ 1.95
SLC11A1-211ENST00000475225 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
SLC11A1-211ENST00000475225 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.95
SLC11A1-211ENST00000475225 ARAP1Q96P48 1450 aa27.18■■□□□ 1.94
SLC11A1-211ENST00000475225 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
SLC11A1-211ENST00000475225 GRIN2AQ12879 1464 aa27.01■■□□□ 1.91
SLC11A1-211ENST00000475225 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
SLC11A1-211ENST00000475225 FHAD1B1AJZ9 1412 aa26.92■■□□□ 1.9
SLC11A1-211ENST00000475225 CEP170Q5SW79 1584 aa26.91■■□□□ 1.9
SLC11A1-211ENST00000475225 TRHP20396 242 aaPredicted RBP26.89■■□□□ 1.9
SLC11A1-211ENST00000475225 NUP160Q12769 1436 aa26.87■■□□□ 1.89
SLC11A1-211ENST00000475225 SHROOM2Q13796 1616 aa26.8■■□□□ 1.88
SLC11A1-211ENST00000475225 ERCC6L2Q5T890 1561 aa26.78■■□□□ 1.88
SLC11A1-211ENST00000475225 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
SLC11A1-211ENST00000475225 FAM9AQ8IZU1 332 aaPredicted RBP26.68■■□□□ 1.86
SLC11A1-211ENST00000475225 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms