RNA–Protein interactions for RNA: ENST00000474937.1

NIN-209, Transcript of ninein, humanhuman

TSL 3

Gene NIN, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-209ENST00000474937 NISCHQ9Y2I1 1504 aa31.07■■■□□ 2.56
NIN-209ENST00000474937 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
NIN-209ENST00000474937 ABCC9O60706 1549 aa27.61■■■□□ 2.01
NIN-209ENST00000474937 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
NIN-209ENST00000474937 NACADO15069 1562 aa26.26■■□□□ 1.79
NIN-209ENST00000474937 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
NIN-209ENST00000474937 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
NIN-209ENST00000474937 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
NIN-209ENST00000474937 DNAJC5BQ9UF47 199 aa25.76■■□□□ 1.71
NIN-209ENST00000474937 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
NIN-209ENST00000474937 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
NIN-209ENST00000474937 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
NIN-209ENST00000474937 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
NIN-209ENST00000474937 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
NIN-209ENST00000474937 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
NIN-209ENST00000474937 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
NIN-209ENST00000474937 EIF4G1Q04637 1599 aaKnown RBP24.94■■□□□ 1.58
NIN-209ENST00000474937 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
NIN-209ENST00000474937 AEBP2Q6ZN18 517 aaPredicted RBP24.55■■□□□ 1.52
NIN-209ENST00000474937 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
NIN-209ENST00000474937 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
NIN-209ENST00000474937 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
NIN-209ENST00000474937 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
NIN-209ENST00000474937 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
NIN-209ENST00000474937 HMGXB3Q12766 1538 aa24.07■■□□□ 1.44
NIN-209ENST00000474937 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
NIN-209ENST00000474937 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
NIN-209ENST00000474937 BAZ1BQ9UIG0 1483 aaKnown RBP23.95■■□□□ 1.42
NIN-209ENST00000474937 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
NIN-209ENST00000474937 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
NIN-209ENST00000474937 CUX2O14529 1486 aa23.76■■□□□ 1.39
NIN-209ENST00000474937 NESP48681 1621 aa23.76■■□□□ 1.39
NIN-209ENST00000474937 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
NIN-209ENST00000474937 WIZO95785 1651 aa23.61■■□□□ 1.37
NIN-209ENST00000474937 DNAJC5Q9H3Z4 198 aa23.58■■□□□ 1.37
NIN-209ENST00000474937 PDS5BQ9NTI5 1447 aa23.55■■□□□ 1.36
NIN-209ENST00000474937 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
NIN-209ENST00000474937 RSF1Q96T23 1441 aaPredicted RBP23.51■■□□□ 1.35
NIN-209ENST00000474937 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
NIN-209ENST00000474937 KIF21AQ7Z4S6 1674 aa23.42■■□□□ 1.34
NIN-209ENST00000474937 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
NIN-209ENST00000474937 MRC2Q9UBG0 1479 aa23.3■■□□□ 1.32
NIN-209ENST00000474937 CFTRP13569 1480 aa23.29■■□□□ 1.32
NIN-209ENST00000474937 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
NIN-209ENST00000474937 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
NIN-209ENST00000474937 WDR62O43379 1518 aa23.23■■□□□ 1.31
NIN-209ENST00000474937 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
NIN-209ENST00000474937 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
NIN-209ENST00000474937 PRDM2Q13029 1718 aa22.99■■□□□ 1.27
NIN-209ENST00000474937 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
NIN-209ENST00000474937 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
NIN-209ENST00000474937 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
NIN-209ENST00000474937 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
NIN-209ENST00000474937 DNMBPQ6XZF7 1577 aa22.73■■□□□ 1.23
NIN-209ENST00000474937 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
NIN-209ENST00000474937 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
NIN-209ENST00000474937 POLA1P09884 1462 aaPredicted RBP22.59■■□□□ 1.21
NIN-209ENST00000474937 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
NIN-209ENST00000474937 EIF4G3O43432 1585 aaKnown RBP22.56■■□□□ 1.2
NIN-209ENST00000474937 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
NIN-209ENST00000474937 AQRO60306 1485 aaKnown RBP eCLIP22.53■■□□□ 1.2
NIN-209ENST00000474937 SOGA1O94964 1423 aa22.5■■□□□ 1.19
NIN-209ENST00000474937 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
NIN-209ENST00000474937 CUX1P39880 1505 aa22.47■■□□□ 1.19
NIN-209ENST00000474937 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
NIN-209ENST00000474937 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
NIN-209ENST00000474937 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
NIN-209ENST00000474937 FBLN2P98095 1184 aa22.36■■□□□ 1.17
NIN-209ENST00000474937 RIMBP3CA6NJZ7 1639 aa22.34■■□□□ 1.17
NIN-209ENST00000474937 RIMBP3BA6NNM3 1639 aa22.34■■□□□ 1.17
NIN-209ENST00000474937 RIMBP3Q9UFD9 1639 aa22.34■■□□□ 1.17
NIN-209ENST00000474937 CHD1O14646 1710 aa22.34■■□□□ 1.17
NIN-209ENST00000474937 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
NIN-209ENST00000474937 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
NIN-209ENST00000474937 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
NIN-209ENST00000474937 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
NIN-209ENST00000474937 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
NIN-209ENST00000474937 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
NIN-209ENST00000474937 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
NIN-209ENST00000474937 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
NIN-209ENST00000474937 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
NIN-209ENST00000474937 CYB5RLQ6IPT4 315 aa22.17■■□□□ 1.14
NIN-209ENST00000474937 TOP2BQ02880 1626 aa22.16■■□□□ 1.14
NIN-209ENST00000474937 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
NIN-209ENST00000474937 SYNJ1O43426 1573 aa22.15■■□□□ 1.14
NIN-209ENST00000474937 PBRM1Q86U86 1689 aa22.14■■□□□ 1.14
NIN-209ENST00000474937 BIVM-ERCC5R4GMW8 1640 aa22.14■■□□□ 1.14
NIN-209ENST00000474937 CLASP1Q7Z460 1538 aa22.13■■□□□ 1.13
NIN-209ENST00000474937 ARAP1Q96P48 1450 aa22.1■■□□□ 1.13
NIN-209ENST00000474937 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
NIN-209ENST00000474937 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
NIN-209ENST00000474937 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
NIN-209ENST00000474937 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
NIN-209ENST00000474937 NUP160Q12769 1436 aa21.92■■□□□ 1.1
NIN-209ENST00000474937 CEP170Q5SW79 1584 aa21.87■■□□□ 1.09
NIN-209ENST00000474937 TRHP20396 242 aaPredicted RBP21.85■■□□□ 1.09
NIN-209ENST00000474937 SHROOM2Q13796 1616 aa21.78■■□□□ 1.08
NIN-209ENST00000474937 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
NIN-209ENST00000474937 ERCC6L2Q5T890 1561 aa21.77■■□□□ 1.08
NIN-209ENST00000474937 IGF1RP08069 1367 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms