RNA–Protein interactions for RNA: ENST00000474837.5

SFMBT1-203, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 4

Gene SFMBT1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-203ENST00000474837 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
SFMBT1-203ENST00000474837 ABCC9O60706 1549 aa36.69■■■■□ 3.46
SFMBT1-203ENST00000474837 CCDC180Q9P1Z9 1646 aa36.39■■■■□ 3.42
SFMBT1-203ENST00000474837 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
SFMBT1-203ENST00000474837 DNAJC5BQ9UF47 199 aa34.63■■■■□ 3.13
SFMBT1-203ENST00000474837 NACADO15069 1562 aa34.56■■■■□ 3.12
SFMBT1-203ENST00000474837 DCAF8L2P0C7V8 631 aa34.41■■■■□ 3.1
SFMBT1-203ENST00000474837 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
SFMBT1-203ENST00000474837 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
SFMBT1-203ENST00000474837 UNC13AQ9UPW8 1703 aa33.81■■■■□ 3
SFMBT1-203ENST00000474837 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
SFMBT1-203ENST00000474837 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
SFMBT1-203ENST00000474837 DCAF1Q9Y4B6 1507 aa33.48■■■□□ 2.95
SFMBT1-203ENST00000474837 SHROOM4Q9ULL8 1493 aa33.43■■■□□ 2.94
SFMBT1-203ENST00000474837 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
SFMBT1-203ENST00000474837 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
SFMBT1-203ENST00000474837 CC2D2AQ9P2K1 1620 aa33.09■■■□□ 2.89
SFMBT1-203ENST00000474837 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
SFMBT1-203ENST00000474837 DNAJC5Q9H3Z4 198 aa32.09■■■□□ 2.73
SFMBT1-203ENST00000474837 NCAPD3P42695 1498 aa31.93■■■□□ 2.7
SFMBT1-203ENST00000474837 CUX2O14529 1486 aa31.79■■■□□ 2.68
SFMBT1-203ENST00000474837 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
SFMBT1-203ENST00000474837 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
SFMBT1-203ENST00000474837 SMARCA2P51531 1590 aa31.68■■■□□ 2.66
SFMBT1-203ENST00000474837 HMGXB3Q12766 1538 aa31.62■■■□□ 2.65
SFMBT1-203ENST00000474837 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
SFMBT1-203ENST00000474837 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
SFMBT1-203ENST00000474837 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
SFMBT1-203ENST00000474837 NESP48681 1621 aa31.4■■■□□ 2.62
SFMBT1-203ENST00000474837 PEG3Q9GZU2 1588 aa31.33■■■□□ 2.61
SFMBT1-203ENST00000474837 LAMC3Q9Y6N6 1575 aa31.21■■■□□ 2.59
SFMBT1-203ENST00000474837 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
SFMBT1-203ENST00000474837 PDS5BQ9NTI5 1447 aa31.13■■■□□ 2.57
SFMBT1-203ENST00000474837 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
SFMBT1-203ENST00000474837 CADPSQ9ULU8 1353 aa30.97■■■□□ 2.55
SFMBT1-203ENST00000474837 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
SFMBT1-203ENST00000474837 MRC2Q9UBG0 1479 aa30.8■■■□□ 2.52
SFMBT1-203ENST00000474837 WIZO95785 1651 aa30.72■■■□□ 2.51
SFMBT1-203ENST00000474837 WDR62O43379 1518 aa30.69■■■□□ 2.5
SFMBT1-203ENST00000474837 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
SFMBT1-203ENST00000474837 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
SFMBT1-203ENST00000474837 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
SFMBT1-203ENST00000474837 CFTRP13569 1480 aa30.53■■■□□ 2.48
SFMBT1-203ENST00000474837 RSF1Q96T23 1441 aaPredicted RBP30.48■■■□□ 2.47
SFMBT1-203ENST00000474837 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
SFMBT1-203ENST00000474837 OSCARQ8IYS5 282 aa30.38■■■□□ 2.45
SFMBT1-203ENST00000474837 URB2Q14146 1524 aaKnown RBP30.28■■■□□ 2.44
SFMBT1-203ENST00000474837 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
SFMBT1-203ENST00000474837 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
SFMBT1-203ENST00000474837 PRDM2Q13029 1718 aa30.01■■■□□ 2.39
SFMBT1-203ENST00000474837 ABCC8Q09428 1581 aa29.96■■■□□ 2.39
SFMBT1-203ENST00000474837 ZNF608Q9ULD9 1512 aaPredicted RBP29.95■■■□□ 2.38
SFMBT1-203ENST00000474837 TOPBP1Q92547 1522 aa29.94■■■□□ 2.38
SFMBT1-203ENST00000474837 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
SFMBT1-203ENST00000474837 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
SFMBT1-203ENST00000474837 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
SFMBT1-203ENST00000474837 DNMBPQ6XZF7 1577 aa29.8■■■□□ 2.36
SFMBT1-203ENST00000474837 ARHGEF11O15085 1522 aa29.76■■■□□ 2.35
SFMBT1-203ENST00000474837 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
SFMBT1-203ENST00000474837 AQRO60306 1485 aaKnown RBP eCLIP29.69■■■□□ 2.34
SFMBT1-203ENST00000474837 CYB5RLQ6IPT4 315 aa29.64■■■□□ 2.34
SFMBT1-203ENST00000474837 FBLN2P98095 1184 aa29.63■■■□□ 2.33
SFMBT1-203ENST00000474837 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
SFMBT1-203ENST00000474837 TARBP1Q13395 1621 aaKnown RBP29.62■■■□□ 2.33
SFMBT1-203ENST00000474837 SOGA1O94964 1423 aa29.54■■■□□ 2.32
SFMBT1-203ENST00000474837 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
SFMBT1-203ENST00000474837 CHD1O14646 1710 aa29.49■■■□□ 2.31
SFMBT1-203ENST00000474837 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
SFMBT1-203ENST00000474837 ARAP1Q96P48 1450 aa29.43■■■□□ 2.3
SFMBT1-203ENST00000474837 TRHP20396 242 aaPredicted RBP29.42■■■□□ 2.3
SFMBT1-203ENST00000474837 CHMP7Q8WUX9 453 aaPredicted RBP29.41■■■□□ 2.3
SFMBT1-203ENST00000474837 WDR97A6NE52 1622 aa29.41■■■□□ 2.3
SFMBT1-203ENST00000474837 FGD5Q6ZNL6 1462 aa29.4■■■□□ 2.3
SFMBT1-203ENST00000474837 SNAPC4Q5SXM2 1469 aa29.37■■■□□ 2.29
SFMBT1-203ENST00000474837 MAGI1Q96QZ7 1491 aaPredicted RBP29.33■■■□□ 2.29
SFMBT1-203ENST00000474837 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
SFMBT1-203ENST00000474837 CUX1P39880 1505 aa29.29■■■□□ 2.28
SFMBT1-203ENST00000474837 SYNJ1O43426 1573 aa29.27■■■□□ 2.28
SFMBT1-203ENST00000474837 CLASP1Q7Z460 1538 aa29.24■■■□□ 2.27
SFMBT1-203ENST00000474837 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
SFMBT1-203ENST00000474837 GAPVD1Q14C86 1478 aa29.16■■■□□ 2.26
SFMBT1-203ENST00000474837 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
SFMBT1-203ENST00000474837 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
SFMBT1-203ENST00000474837 PBRM1Q86U86 1689 aa29■■■□□ 2.23
SFMBT1-203ENST00000474837 ABCA5Q8WWZ7 1642 aa28.97■■■□□ 2.23
SFMBT1-203ENST00000474837 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
SFMBT1-203ENST00000474837 GRIN2AQ12879 1464 aa28.89■■■□□ 2.22
SFMBT1-203ENST00000474837 NUP160Q12769 1436 aa28.82■■■□□ 2.2
SFMBT1-203ENST00000474837 FHAD1B1AJZ9 1412 aa28.81■■■□□ 2.2
SFMBT1-203ENST00000474837 AEBP2Q6ZN18 517 aaPredicted RBP28.8■■■□□ 2.2
SFMBT1-203ENST00000474837 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
SFMBT1-203ENST00000474837 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
SFMBT1-203ENST00000474837 BIVM-ERCC5R4GMW8 1640 aa28.73■■■□□ 2.19
SFMBT1-203ENST00000474837 CEP170Q5SW79 1584 aa28.73■■■□□ 2.19
SFMBT1-203ENST00000474837 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
SFMBT1-203ENST00000474837 ERICH3Q5RHP9 1530 aa28.71■■■□□ 2.19
SFMBT1-203ENST00000474837 SHROOM2Q13796 1616 aa28.63■■■□□ 2.17
SFMBT1-203ENST00000474837 JPH4Q96JJ6 628 aa28.6■■■□□ 2.17
SFMBT1-203ENST00000474837 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
SFMBT1-203ENST00000474837 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms