RNA–Protein interactions for RNA: ENST00000474670.6

MFSD1-210, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 5

Gene MFSD1, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-210ENST00000474670 NISCHQ9Y2I1 1504 aa28.25■■■□□ 2.11
MFSD1-210ENST00000474670 ABCC9O60706 1549 aa26.62■■□□□ 1.85
MFSD1-210ENST00000474670 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
MFSD1-210ENST00000474670 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
MFSD1-210ENST00000474670 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
MFSD1-210ENST00000474670 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.54
MFSD1-210ENST00000474670 NACADO15069 1562 aa24.61■■□□□ 1.53
MFSD1-210ENST00000474670 DNAJC5Q9H3Z4 198 aa24.53■■□□□ 1.52
MFSD1-210ENST00000474670 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
MFSD1-210ENST00000474670 UNC13AQ9UPW8 1703 aa24.24■■□□□ 1.47
MFSD1-210ENST00000474670 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
MFSD1-210ENST00000474670 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
MFSD1-210ENST00000474670 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
MFSD1-210ENST00000474670 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
MFSD1-210ENST00000474670 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
MFSD1-210ENST00000474670 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
MFSD1-210ENST00000474670 CUX2O14529 1486 aa23.45■■□□□ 1.34
MFSD1-210ENST00000474670 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
MFSD1-210ENST00000474670 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
MFSD1-210ENST00000474670 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
MFSD1-210ENST00000474670 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
MFSD1-210ENST00000474670 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
MFSD1-210ENST00000474670 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
MFSD1-210ENST00000474670 NESP48681 1621 aa22.58■■□□□ 1.21
MFSD1-210ENST00000474670 THOC2Q8NI27 1593 aaKnown RBP22.57■■□□□ 1.2
MFSD1-210ENST00000474670 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
MFSD1-210ENST00000474670 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
MFSD1-210ENST00000474670 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
MFSD1-210ENST00000474670 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
MFSD1-210ENST00000474670 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
MFSD1-210ENST00000474670 BAZ1BQ9UIG0 1483 aaKnown RBP22.22■■□□□ 1.15
MFSD1-210ENST00000474670 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
MFSD1-210ENST00000474670 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
MFSD1-210ENST00000474670 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
MFSD1-210ENST00000474670 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
MFSD1-210ENST00000474670 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
MFSD1-210ENST00000474670 WDR62O43379 1518 aa22.1■■□□□ 1.13
MFSD1-210ENST00000474670 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
MFSD1-210ENST00000474670 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
MFSD1-210ENST00000474670 RIMBP3CA6NJZ7 1639 aa21.91■■□□□ 1.1
MFSD1-210ENST00000474670 RIMBP3BA6NNM3 1639 aa21.91■■□□□ 1.1
MFSD1-210ENST00000474670 RIMBP3Q9UFD9 1639 aa21.91■■□□□ 1.1
MFSD1-210ENST00000474670 AEBP2Q6ZN18 517 aaPredicted RBP21.84■■□□□ 1.09
MFSD1-210ENST00000474670 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
MFSD1-210ENST00000474670 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
MFSD1-210ENST00000474670 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
MFSD1-210ENST00000474670 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
MFSD1-210ENST00000474670 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
MFSD1-210ENST00000474670 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
MFSD1-210ENST00000474670 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
MFSD1-210ENST00000474670 CFTRP13569 1480 aa21.56■■□□□ 1.04
MFSD1-210ENST00000474670 ARAP1Q96P48 1450 aa21.52■■□□□ 1.03
MFSD1-210ENST00000474670 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
MFSD1-210ENST00000474670 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
MFSD1-210ENST00000474670 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
MFSD1-210ENST00000474670 WIZO95785 1651 aa21.34■■□□□ 1.01
MFSD1-210ENST00000474670 EIF4G3O43432 1585 aaKnown RBP21.26■□□□□ 0.99
MFSD1-210ENST00000474670 CHD1O14646 1710 aa21.21■□□□□ 0.99
MFSD1-210ENST00000474670 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
MFSD1-210ENST00000474670 FBLN2P98095 1184 aa21.18■□□□□ 0.98
MFSD1-210ENST00000474670 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
MFSD1-210ENST00000474670 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.98
MFSD1-210ENST00000474670 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
MFSD1-210ENST00000474670 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
MFSD1-210ENST00000474670 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
MFSD1-210ENST00000474670 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
MFSD1-210ENST00000474670 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
MFSD1-210ENST00000474670 DNMBPQ6XZF7 1577 aa21.02■□□□□ 0.96
MFSD1-210ENST00000474670 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
MFSD1-210ENST00000474670 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
MFSD1-210ENST00000474670 CHMP7Q8WUX9 453 aaPredicted RBP20.93■□□□□ 0.94
MFSD1-210ENST00000474670 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
MFSD1-210ENST00000474670 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
MFSD1-210ENST00000474670 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
MFSD1-210ENST00000474670 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
MFSD1-210ENST00000474670 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
MFSD1-210ENST00000474670 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
MFSD1-210ENST00000474670 SOGA1O94964 1423 aa20.82■□□□□ 0.92
MFSD1-210ENST00000474670 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
MFSD1-210ENST00000474670 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
MFSD1-210ENST00000474670 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
MFSD1-210ENST00000474670 KDM4FA0A1W2PPD8 638 aa20.71■□□□□ 0.91
MFSD1-210ENST00000474670 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
MFSD1-210ENST00000474670 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
MFSD1-210ENST00000474670 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
MFSD1-210ENST00000474670 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
MFSD1-210ENST00000474670 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.88
MFSD1-210ENST00000474670 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
MFSD1-210ENST00000474670 NUP160Q12769 1436 aa20.48■□□□□ 0.87
MFSD1-210ENST00000474670 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
MFSD1-210ENST00000474670 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
MFSD1-210ENST00000474670 CUX1P39880 1505 aa20.45■□□□□ 0.86
MFSD1-210ENST00000474670 KDM6BO15054 1643 aa20.44■□□□□ 0.86
MFSD1-210ENST00000474670 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
MFSD1-210ENST00000474670 MAPKBP1O60336 1514 aa20.41■□□□□ 0.86
MFSD1-210ENST00000474670 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
MFSD1-210ENST00000474670 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
MFSD1-210ENST00000474670 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
MFSD1-210ENST00000474670 DIP2BQ9P265 1576 aa20.38■□□□□ 0.85
MFSD1-210ENST00000474670 PRG4Q92954 1404 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms