RNA–Protein interactions for RNA: ENST00000474472.5

LPP-214, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-214ENST00000474472 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
LPP-214ENST00000474472 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
LPP-214ENST00000474472 ABCC9O60706 1549 aa19.71■□□□□ 0.75
LPP-214ENST00000474472 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
LPP-214ENST00000474472 DCAF8L2P0C7V8 631 aa18.78■□□□□ 0.6
LPP-214ENST00000474472 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
LPP-214ENST00000474472 NACADO15069 1562 aa18.7■□□□□ 0.58
LPP-214ENST00000474472 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
LPP-214ENST00000474472 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
LPP-214ENST00000474472 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
LPP-214ENST00000474472 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
LPP-214ENST00000474472 UNC13AQ9UPW8 1703 aa18.4■□□□□ 0.54
LPP-214ENST00000474472 DCAF1Q9Y4B6 1507 aa18.35■□□□□ 0.53
LPP-214ENST00000474472 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
LPP-214ENST00000474472 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
LPP-214ENST00000474472 SCRIBQ14160 1630 aa18.12■□□□□ 0.49
LPP-214ENST00000474472 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
LPP-214ENST00000474472 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
LPP-214ENST00000474472 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
LPP-214ENST00000474472 CECR2Q9BXF3 1484 aa17.7■□□□□ 0.42
LPP-214ENST00000474472 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
LPP-214ENST00000474472 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
LPP-214ENST00000474472 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
LPP-214ENST00000474472 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
LPP-214ENST00000474472 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
LPP-214ENST00000474472 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
LPP-214ENST00000474472 HMGXB3Q12766 1538 aa17.14■□□□□ 0.33
LPP-214ENST00000474472 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
LPP-214ENST00000474472 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
LPP-214ENST00000474472 NESP48681 1621 aa17.01■□□□□ 0.31
LPP-214ENST00000474472 WIZO95785 1651 aa16.98■□□□□ 0.31
LPP-214ENST00000474472 ERCC6Q03468 1493 aa16.94■□□□□ 0.3
LPP-214ENST00000474472 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
LPP-214ENST00000474472 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
LPP-214ENST00000474472 CUX2O14529 1486 aa16.82■□□□□ 0.28
LPP-214ENST00000474472 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
LPP-214ENST00000474472 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
LPP-214ENST00000474472 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
LPP-214ENST00000474472 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
LPP-214ENST00000474472 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
LPP-214ENST00000474472 DNAJC5Q9H3Z4 198 aa16.69■□□□□ 0.26
LPP-214ENST00000474472 CFTRP13569 1480 aa16.64■□□□□ 0.25
LPP-214ENST00000474472 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
LPP-214ENST00000474472 MRC2Q9UBG0 1479 aa16.6■□□□□ 0.25
LPP-214ENST00000474472 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
LPP-214ENST00000474472 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
LPP-214ENST00000474472 WDR62O43379 1518 aa16.55■□□□□ 0.24
LPP-214ENST00000474472 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
LPP-214ENST00000474472 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
LPP-214ENST00000474472 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
LPP-214ENST00000474472 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
LPP-214ENST00000474472 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
LPP-214ENST00000474472 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
LPP-214ENST00000474472 ABCC8Q09428 1581 aa16.24■□□□□ 0.19
LPP-214ENST00000474472 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
LPP-214ENST00000474472 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
LPP-214ENST00000474472 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
LPP-214ENST00000474472 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
LPP-214ENST00000474472 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
LPP-214ENST00000474472 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
LPP-214ENST00000474472 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
LPP-214ENST00000474472 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
LPP-214ENST00000474472 CUX1P39880 1505 aa16.11■□□□□ 0.17
LPP-214ENST00000474472 SOGA1O94964 1423 aa16.1■□□□□ 0.17
LPP-214ENST00000474472 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
LPP-214ENST00000474472 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.16
LPP-214ENST00000474472 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
LPP-214ENST00000474472 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
LPP-214ENST00000474472 FBLN2P98095 1184 aa15.98■□□□□ 0.15
LPP-214ENST00000474472 CHD1O14646 1710 aa15.96■□□□□ 0.15
LPP-214ENST00000474472 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
LPP-214ENST00000474472 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
LPP-214ENST00000474472 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
LPP-214ENST00000474472 RIMBP3CA6NJZ7 1639 aa15.9■□□□□ 0.14
LPP-214ENST00000474472 RIMBP3BA6NNM3 1639 aa15.9■□□□□ 0.14
LPP-214ENST00000474472 RIMBP3Q9UFD9 1639 aa15.9■□□□□ 0.14
LPP-214ENST00000474472 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
LPP-214ENST00000474472 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
LPP-214ENST00000474472 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
LPP-214ENST00000474472 GAPVD1Q14C86 1478 aa15.89■□□□□ 0.13
LPP-214ENST00000474472 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
LPP-214ENST00000474472 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
LPP-214ENST00000474472 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
LPP-214ENST00000474472 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
LPP-214ENST00000474472 MAGI1Q96QZ7 1491 aaPredicted RBP15.85■□□□□ 0.13
LPP-214ENST00000474472 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
LPP-214ENST00000474472 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
LPP-214ENST00000474472 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
LPP-214ENST00000474472 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
LPP-214ENST00000474472 CLASP1Q7Z460 1538 aa15.78■□□□□ 0.12
LPP-214ENST00000474472 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
LPP-214ENST00000474472 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
LPP-214ENST00000474472 GRIN2AQ12879 1464 aa15.7■□□□□ 0.1
LPP-214ENST00000474472 FHAD1B1AJZ9 1412 aa15.68■□□□□ 0.1
LPP-214ENST00000474472 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
LPP-214ENST00000474472 NUP160Q12769 1436 aa15.65■□□□□ 0.1
LPP-214ENST00000474472 CEP170Q5SW79 1584 aa15.65■□□□□ 0.1
LPP-214ENST00000474472 IGF1RP08069 1367 aa15.62■□□□□ 0.09
LPP-214ENST00000474472 ERCC6L2Q5T890 1561 aa15.61■□□□□ 0.09
LPP-214ENST00000474472 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms