RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
EXOSC1-207ENST00000474309 ABCC9O60706 1549 aa26.27■■□□□ 1.8
EXOSC1-207ENST00000474309 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
EXOSC1-207ENST00000474309 RB1CC1Q8TDY2 1594 aa24.97■■□□□ 1.59
EXOSC1-207ENST00000474309 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
EXOSC1-207ENST00000474309 NACADO15069 1562 aa24.8■■□□□ 1.56
EXOSC1-207ENST00000474309 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
EXOSC1-207ENST00000474309 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
EXOSC1-207ENST00000474309 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.5
EXOSC1-207ENST00000474309 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
EXOSC1-207ENST00000474309 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
EXOSC1-207ENST00000474309 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
EXOSC1-207ENST00000474309 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
EXOSC1-207ENST00000474309 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
EXOSC1-207ENST00000474309 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
EXOSC1-207ENST00000474309 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
EXOSC1-207ENST00000474309 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
EXOSC1-207ENST00000474309 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
EXOSC1-207ENST00000474309 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
EXOSC1-207ENST00000474309 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
EXOSC1-207ENST00000474309 CUX2O14529 1486 aa22.79■■□□□ 1.24
EXOSC1-207ENST00000474309 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
EXOSC1-207ENST00000474309 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
EXOSC1-207ENST00000474309 SMARCA2P51531 1590 aa22.71■■□□□ 1.23
EXOSC1-207ENST00000474309 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
EXOSC1-207ENST00000474309 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
EXOSC1-207ENST00000474309 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
EXOSC1-207ENST00000474309 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
EXOSC1-207ENST00000474309 NESP48681 1621 aa22.52■■□□□ 1.2
EXOSC1-207ENST00000474309 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
EXOSC1-207ENST00000474309 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
EXOSC1-207ENST00000474309 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
EXOSC1-207ENST00000474309 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
EXOSC1-207ENST00000474309 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
EXOSC1-207ENST00000474309 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
EXOSC1-207ENST00000474309 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
EXOSC1-207ENST00000474309 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
EXOSC1-207ENST00000474309 WIZO95785 1651 aa22.06■■□□□ 1.12
EXOSC1-207ENST00000474309 WDR62O43379 1518 aa22■■□□□ 1.11
EXOSC1-207ENST00000474309 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
EXOSC1-207ENST00000474309 CFTRP13569 1480 aa21.9■■□□□ 1.1
EXOSC1-207ENST00000474309 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
EXOSC1-207ENST00000474309 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
EXOSC1-207ENST00000474309 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
EXOSC1-207ENST00000474309 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
EXOSC1-207ENST00000474309 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
EXOSC1-207ENST00000474309 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
EXOSC1-207ENST00000474309 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
EXOSC1-207ENST00000474309 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
EXOSC1-207ENST00000474309 IFT140Q96RY7 1462 aa21.54■■□□□ 1.04
EXOSC1-207ENST00000474309 ABCC8Q09428 1581 aa21.49■■□□□ 1.03
EXOSC1-207ENST00000474309 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
EXOSC1-207ENST00000474309 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
EXOSC1-207ENST00000474309 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
EXOSC1-207ENST00000474309 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
EXOSC1-207ENST00000474309 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
EXOSC1-207ENST00000474309 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
EXOSC1-207ENST00000474309 ARHGEF11O15085 1522 aa21.32■■□□□ 1
EXOSC1-207ENST00000474309 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
EXOSC1-207ENST00000474309 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
EXOSC1-207ENST00000474309 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
EXOSC1-207ENST00000474309 CYB5RLQ6IPT4 315 aa21.24■□□□□ 0.99
EXOSC1-207ENST00000474309 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
EXOSC1-207ENST00000474309 FBLN2P98095 1184 aa21.2■□□□□ 0.98
EXOSC1-207ENST00000474309 SOGA1O94964 1423 aa21.19■□□□□ 0.98
EXOSC1-207ENST00000474309 CHD1O14646 1710 aa21.18■□□□□ 0.98
EXOSC1-207ENST00000474309 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
EXOSC1-207ENST00000474309 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
EXOSC1-207ENST00000474309 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
EXOSC1-207ENST00000474309 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
EXOSC1-207ENST00000474309 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
EXOSC1-207ENST00000474309 FGD5Q6ZNL6 1462 aa21.06■□□□□ 0.96
EXOSC1-207ENST00000474309 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
EXOSC1-207ENST00000474309 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
EXOSC1-207ENST00000474309 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
EXOSC1-207ENST00000474309 CUX1P39880 1505 aa21.01■□□□□ 0.95
EXOSC1-207ENST00000474309 GRIN2BQ13224 1484 aa21■□□□□ 0.95
EXOSC1-207ENST00000474309 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
EXOSC1-207ENST00000474309 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
EXOSC1-207ENST00000474309 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
EXOSC1-207ENST00000474309 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
EXOSC1-207ENST00000474309 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
EXOSC1-207ENST00000474309 PBRM1Q86U86 1689 aa20.82■□□□□ 0.92
EXOSC1-207ENST00000474309 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
EXOSC1-207ENST00000474309 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
EXOSC1-207ENST00000474309 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
EXOSC1-207ENST00000474309 GRIN2AQ12879 1464 aa20.7■□□□□ 0.9
EXOSC1-207ENST00000474309 NUP160Q12769 1436 aa20.67■□□□□ 0.9
EXOSC1-207ENST00000474309 TOP2BQ02880 1626 aa20.65■□□□□ 0.9
EXOSC1-207ENST00000474309 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
EXOSC1-207ENST00000474309 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
EXOSC1-207ENST00000474309 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
EXOSC1-207ENST00000474309 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
EXOSC1-207ENST00000474309 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
EXOSC1-207ENST00000474309 ERICH3Q5RHP9 1530 aa20.59■□□□□ 0.89
EXOSC1-207ENST00000474309 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
EXOSC1-207ENST00000474309 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
EXOSC1-207ENST00000474309 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
EXOSC1-207ENST00000474309 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
EXOSC1-207ENST00000474309 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms