RNA–Protein interactions for RNA: ENST00000473910.5

GPATCH4-205, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 2,464 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-205ENST00000473910 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
GPATCH4-205ENST00000473910 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
GPATCH4-205ENST00000473910 ABCC9O60706 1549 aa15.46■□□□□ 0.07
GPATCH4-205ENST00000473910 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
GPATCH4-205ENST00000473910 NACADO15069 1562 aa14.68□□□□□ -0.06
GPATCH4-205ENST00000473910 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
GPATCH4-205ENST00000473910 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
GPATCH4-205ENST00000473910 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
GPATCH4-205ENST00000473910 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
GPATCH4-205ENST00000473910 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
GPATCH4-205ENST00000473910 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
GPATCH4-205ENST00000473910 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
GPATCH4-205ENST00000473910 BICRAQ9NZM4 1560 aa14.3□□□□□ -0.12
GPATCH4-205ENST00000473910 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
GPATCH4-205ENST00000473910 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
GPATCH4-205ENST00000473910 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
GPATCH4-205ENST00000473910 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.18
GPATCH4-205ENST00000473910 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
GPATCH4-205ENST00000473910 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
GPATCH4-205ENST00000473910 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
GPATCH4-205ENST00000473910 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
GPATCH4-205ENST00000473910 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
GPATCH4-205ENST00000473910 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-205ENST00000473910 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
GPATCH4-205ENST00000473910 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
GPATCH4-205ENST00000473910 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
GPATCH4-205ENST00000473910 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
GPATCH4-205ENST00000473910 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
GPATCH4-205ENST00000473910 CUX2O14529 1486 aa13.31□□□□□ -0.28
GPATCH4-205ENST00000473910 NESP48681 1621 aa13.29□□□□□ -0.28
GPATCH4-205ENST00000473910 DNAJC5Q9H3Z4 198 aa13.25□□□□□ -0.29
GPATCH4-205ENST00000473910 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
GPATCH4-205ENST00000473910 WIZO95785 1651 aa13.19□□□□□ -0.3
GPATCH4-205ENST00000473910 PDS5BQ9NTI5 1447 aa13.17□□□□□ -0.3
GPATCH4-205ENST00000473910 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
GPATCH4-205ENST00000473910 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
GPATCH4-205ENST00000473910 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
GPATCH4-205ENST00000473910 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
GPATCH4-205ENST00000473910 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
GPATCH4-205ENST00000473910 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
GPATCH4-205ENST00000473910 CFTRP13569 1480 aa13□□□□□ -0.33
GPATCH4-205ENST00000473910 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
GPATCH4-205ENST00000473910 WDR62O43379 1518 aa12.99□□□□□ -0.33
GPATCH4-205ENST00000473910 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
GPATCH4-205ENST00000473910 CCDC88BA6NC98 1476 aa12.89□□□□□ -0.35
GPATCH4-205ENST00000473910 PRDM2Q13029 1718 aa12.87□□□□□ -0.35
GPATCH4-205ENST00000473910 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
GPATCH4-205ENST00000473910 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
GPATCH4-205ENST00000473910 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
GPATCH4-205ENST00000473910 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
GPATCH4-205ENST00000473910 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
GPATCH4-205ENST00000473910 DNMBPQ6XZF7 1577 aa12.7□□□□□ -0.38
GPATCH4-205ENST00000473910 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
GPATCH4-205ENST00000473910 TRIM41Q8WV44 630 aa12.68□□□□□ -0.38
GPATCH4-205ENST00000473910 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
GPATCH4-205ENST00000473910 TARBP1Q13395 1621 aaKnown RBP12.62□□□□□ -0.39
GPATCH4-205ENST00000473910 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
GPATCH4-205ENST00000473910 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■■■ 31.6
GPATCH4-205ENST00000473910 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
GPATCH4-205ENST00000473910 SOGA1O94964 1423 aa12.58□□□□□ -0.4
GPATCH4-205ENST00000473910 RAD54L2Q9Y4B4 1467 aa12.56□□□□□ -0.4
GPATCH4-205ENST00000473910 FGD5Q6ZNL6 1462 aa12.54□□□□□ -0.4
GPATCH4-205ENST00000473910 TDRD9Q8NDG6 1382 aaKnown RBP12.53□□□□□ -0.4
GPATCH4-205ENST00000473910 CUX1P39880 1505 aa12.53□□□□□ -0.4
GPATCH4-205ENST00000473910 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
GPATCH4-205ENST00000473910 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
GPATCH4-205ENST00000473910 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
GPATCH4-205ENST00000473910 FBLN2P98095 1184 aa12.52□□□□□ -0.4
GPATCH4-205ENST00000473910 WDR97A6NE52 1622 aa12.52□□□□□ -0.41
GPATCH4-205ENST00000473910 CHD1O14646 1710 aa12.52□□□□□ -0.41
GPATCH4-205ENST00000473910 ARHGEF11O15085 1522 aa12.49□□□□□ -0.41
GPATCH4-205ENST00000473910 SNAPC4Q5SXM2 1469 aa12.46□□□□□ -0.41
GPATCH4-205ENST00000473910 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.42
GPATCH4-205ENST00000473910 GRIN2BQ13224 1484 aa12.46□□□□□ -0.42
GPATCH4-205ENST00000473910 MAGI1Q96QZ7 1491 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-205ENST00000473910 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
GPATCH4-205ENST00000473910 GAPVD1Q14C86 1478 aa12.42□□□□□ -0.42
GPATCH4-205ENST00000473910 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
GPATCH4-205ENST00000473910 SYNJ2O15056 1496 aa12.41□□□□□ -0.42
GPATCH4-205ENST00000473910 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
GPATCH4-205ENST00000473910 WRNQ14191 1432 aaPredicted RBP eCLIP12.39□□□□□ -0.43
GPATCH4-205ENST00000473910 PBRM1Q86U86 1689 aa12.39□□□□□ -0.43
GPATCH4-205ENST00000473910 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
GPATCH4-205ENST00000473910 ARAP1Q96P48 1450 aa12.37□□□□□ -0.43
GPATCH4-205ENST00000473910 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
GPATCH4-205ENST00000473910 TOP2BQ02880 1626 aa12.36□□□□□ -0.43
GPATCH4-205ENST00000473910 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
GPATCH4-205ENST00000473910 GRIN2AQ12879 1464 aa12.28□□□□□ -0.44
GPATCH4-205ENST00000473910 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
GPATCH4-205ENST00000473910 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
GPATCH4-205ENST00000473910 ADAMTS12P58397 1594 aa12.27□□□□□ -0.45
GPATCH4-205ENST00000473910 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.45
GPATCH4-205ENST00000473910 NUP160Q12769 1436 aa12.24□□□□□ -0.45
GPATCH4-205ENST00000473910 CHIC1Q5VXU3 224 aa12.23□□□□□ -0.45
GPATCH4-205ENST00000473910 CEP170Q5SW79 1584 aa12.22□□□□□ -0.45
GPATCH4-205ENST00000473910 SHROOM2Q13796 1616 aa12.17□□□□□ -0.46
GPATCH4-205ENST00000473910 ERCC6L2Q5T890 1561 aa12.17□□□□□ -0.46
GPATCH4-205ENST00000473910 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
GPATCH4-205ENST00000473910 KIF27Q86VH2 1401 aa12.15□□□□□ -0.47
GPATCH4-205ENST00000473910 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms