RNA–Protein interactions for RNA: ENST00000473892.1

NECAB3-205, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-205ENST00000473892 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
NECAB3-205ENST00000473892 CCDC180Q9P1Z9 1646 aa29.86■■■□□ 2.37
NECAB3-205ENST00000473892 ABCC9O60706 1549 aa29.26■■■□□ 2.27
NECAB3-205ENST00000473892 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
NECAB3-205ENST00000473892 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
NECAB3-205ENST00000473892 NACADO15069 1562 aa28.07■■■□□ 2.08
NECAB3-205ENST00000473892 ZCCHC6Q5VYS8 1495 aaKnown RBP27.95■■■□□ 2.07
NECAB3-205ENST00000473892 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
NECAB3-205ENST00000473892 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
NECAB3-205ENST00000473892 UNC13AQ9UPW8 1703 aa27.49■■□□□ 1.99
NECAB3-205ENST00000473892 PABPN1Q86U42 306 aaKnown RBP eCLIP27.35■■□□□ 1.97
NECAB3-205ENST00000473892 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
NECAB3-205ENST00000473892 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.96
NECAB3-205ENST00000473892 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
NECAB3-205ENST00000473892 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
NECAB3-205ENST00000473892 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
NECAB3-205ENST00000473892 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
NECAB3-205ENST00000473892 CECR2Q9BXF3 1484 aa26.29■■□□□ 1.8
NECAB3-205ENST00000473892 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
NECAB3-205ENST00000473892 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
NECAB3-205ENST00000473892 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
NECAB3-205ENST00000473892 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
NECAB3-205ENST00000473892 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
NECAB3-205ENST00000473892 MROH2BQ7Z745 1585 aa25.89■■□□□ 1.73
NECAB3-205ENST00000473892 PEG3Q9GZU2 1588 aa25.78■■□□□ 1.72
NECAB3-205ENST00000473892 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
NECAB3-205ENST00000473892 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
NECAB3-205ENST00000473892 WIZO95785 1651 aa25.62■■□□□ 1.69
NECAB3-205ENST00000473892 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
NECAB3-205ENST00000473892 TOP2AP11388 1531 aaKnown RBP25.33■■□□□ 1.65
NECAB3-205ENST00000473892 NESP48681 1621 aa25.31■■□□□ 1.64
NECAB3-205ENST00000473892 LAMC3Q9Y6N6 1575 aa25.23■■□□□ 1.63
NECAB3-205ENST00000473892 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
NECAB3-205ENST00000473892 CADPSQ9ULU8 1353 aa25.16■■□□□ 1.62
NECAB3-205ENST00000473892 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
NECAB3-205ENST00000473892 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
NECAB3-205ENST00000473892 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
NECAB3-205ENST00000473892 CFTRP13569 1480 aa24.99■■□□□ 1.59
NECAB3-205ENST00000473892 SUPT5HO00267 1087 aaKnown RBP24.98■■□□□ 1.59
NECAB3-205ENST00000473892 CUX2O14529 1486 aa24.93■■□□□ 1.58
NECAB3-205ENST00000473892 THOC2Q8NI27 1593 aaKnown RBP24.92■■□□□ 1.58
NECAB3-205ENST00000473892 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
NECAB3-205ENST00000473892 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
NECAB3-205ENST00000473892 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
NECAB3-205ENST00000473892 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
NECAB3-205ENST00000473892 WDR62O43379 1518 aa24.72■■□□□ 1.55
NECAB3-205ENST00000473892 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
NECAB3-205ENST00000473892 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
NECAB3-205ENST00000473892 TOPBP1Q92547 1522 aa24.47■■□□□ 1.51
NECAB3-205ENST00000473892 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
NECAB3-205ENST00000473892 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
NECAB3-205ENST00000473892 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
NECAB3-205ENST00000473892 CUX1P39880 1505 aa24.29■■□□□ 1.48
NECAB3-205ENST00000473892 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
NECAB3-205ENST00000473892 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
NECAB3-205ENST00000473892 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
NECAB3-205ENST00000473892 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
NECAB3-205ENST00000473892 SOGA1O94964 1423 aa24.18■■□□□ 1.46
NECAB3-205ENST00000473892 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
NECAB3-205ENST00000473892 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
NECAB3-205ENST00000473892 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
NECAB3-205ENST00000473892 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.451e-6■■■□□ 17
NECAB3-205ENST00000473892 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
NECAB3-205ENST00000473892 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
NECAB3-205ENST00000473892 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
NECAB3-205ENST00000473892 TDRD9Q8NDG6 1382 aaKnown RBP24.05■■□□□ 1.44
NECAB3-205ENST00000473892 WDR97A6NE52 1622 aa24■■□□□ 1.43
NECAB3-205ENST00000473892 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
NECAB3-205ENST00000473892 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
NECAB3-205ENST00000473892 GRIN2BQ13224 1484 aa23.89■■□□□ 1.42
NECAB3-205ENST00000473892 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
NECAB3-205ENST00000473892 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
NECAB3-205ENST00000473892 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
NECAB3-205ENST00000473892 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
NECAB3-205ENST00000473892 CHD1O14646 1710 aa23.84■■□□□ 1.41
NECAB3-205ENST00000473892 FBLN2P98095 1184 aa23.84■■□□□ 1.41
NECAB3-205ENST00000473892 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
NECAB3-205ENST00000473892 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
NECAB3-205ENST00000473892 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
NECAB3-205ENST00000473892 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
NECAB3-205ENST00000473892 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
NECAB3-205ENST00000473892 KIF27Q86VH2 1401 aa23.63■■□□□ 1.37
NECAB3-205ENST00000473892 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
NECAB3-205ENST00000473892 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
NECAB3-205ENST00000473892 TRIM41Q8WV44 630 aa23.58■■□□□ 1.37
NECAB3-205ENST00000473892 CLASP1Q7Z460 1538 aa23.55■■□□□ 1.36
NECAB3-205ENST00000473892 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
NECAB3-205ENST00000473892 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
NECAB3-205ENST00000473892 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
NECAB3-205ENST00000473892 IGF1RP08069 1367 aa23.52■■□□□ 1.36
NECAB3-205ENST00000473892 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
NECAB3-205ENST00000473892 CUL7Q14999 1698 aa23.48■■□□□ 1.35
NECAB3-205ENST00000473892 CEP170Q5SW79 1584 aa23.47■■□□□ 1.35
NECAB3-205ENST00000473892 NUP160Q12769 1436 aa23.46■■□□□ 1.35
NECAB3-205ENST00000473892 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
NECAB3-205ENST00000473892 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
NECAB3-205ENST00000473892 ARAP1Q96P48 1450 aa23.33■■□□□ 1.33
NECAB3-205ENST00000473892 CYB5RLQ6IPT4 315 aa23.33■■□□□ 1.33
NECAB3-205ENST00000473892 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
NECAB3-205ENST00000473892 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms