RNA–Protein interactions for RNA: ENST00000473811.1

GRIN1-212, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 2

Gene GRIN1, Length 304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-212ENST00000473811 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
GRIN1-212ENST00000473811 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
GRIN1-212ENST00000473811 ABCC9O60706 1549 aa25.91■■□□□ 1.74
GRIN1-212ENST00000473811 RB1CC1Q8TDY2 1594 aa24.93■■□□□ 1.58
GRIN1-212ENST00000473811 NACADO15069 1562 aa24.88■■□□□ 1.57
GRIN1-212ENST00000473811 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
GRIN1-212ENST00000473811 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
GRIN1-212ENST00000473811 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
GRIN1-212ENST00000473811 DCAF8L2P0C7V8 631 aa24.48■■□□□ 1.51
GRIN1-212ENST00000473811 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
GRIN1-212ENST00000473811 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
GRIN1-212ENST00000473811 PABPN1Q86U42 306 aaKnown RBP eCLIP24.09■■□□□ 1.45
GRIN1-212ENST00000473811 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
GRIN1-212ENST00000473811 SCRIBQ14160 1630 aa24■■□□□ 1.43
GRIN1-212ENST00000473811 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
GRIN1-212ENST00000473811 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
GRIN1-212ENST00000473811 CC2D2AQ9P2K1 1620 aa23.51■■□□□ 1.35
GRIN1-212ENST00000473811 CECR2Q9BXF3 1484 aa23.34■■□□□ 1.33
GRIN1-212ENST00000473811 SMARCA4P51532 1647 aa23■■□□□ 1.27
GRIN1-212ENST00000473811 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
GRIN1-212ENST00000473811 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
GRIN1-212ENST00000473811 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
GRIN1-212ENST00000473811 SMARCA2P51531 1590 aa22.88■■□□□ 1.25
GRIN1-212ENST00000473811 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
GRIN1-212ENST00000473811 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
GRIN1-212ENST00000473811 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
GRIN1-212ENST00000473811 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
GRIN1-212ENST00000473811 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
GRIN1-212ENST00000473811 WIZO95785 1651 aa22.49■■□□□ 1.19
GRIN1-212ENST00000473811 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
GRIN1-212ENST00000473811 NESP48681 1621 aa22.39■■□□□ 1.17
GRIN1-212ENST00000473811 LAMC3Q9Y6N6 1575 aa22.38■■□□□ 1.17
GRIN1-212ENST00000473811 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
GRIN1-212ENST00000473811 CUX2O14529 1486 aa22.29■■□□□ 1.16
GRIN1-212ENST00000473811 TOP2AP11388 1531 aaKnown RBP22.27■■□□□ 1.16
GRIN1-212ENST00000473811 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
GRIN1-212ENST00000473811 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
GRIN1-212ENST00000473811 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
GRIN1-212ENST00000473811 PDS5BQ9NTI5 1447 aa22.16■■□□□ 1.14
GRIN1-212ENST00000473811 CFTRP13569 1480 aa22.07■■□□□ 1.12
GRIN1-212ENST00000473811 PRDM2Q13029 1718 aa22■■□□□ 1.11
GRIN1-212ENST00000473811 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
GRIN1-212ENST00000473811 WDR62O43379 1518 aa21.97■■□□□ 1.11
GRIN1-212ENST00000473811 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
GRIN1-212ENST00000473811 CCDC88BA6NC98 1476 aa21.95■■□□□ 1.1
GRIN1-212ENST00000473811 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
GRIN1-212ENST00000473811 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
GRIN1-212ENST00000473811 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
GRIN1-212ENST00000473811 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
GRIN1-212ENST00000473811 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
GRIN1-212ENST00000473811 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
GRIN1-212ENST00000473811 IFT140Q96RY7 1462 aa21.52■■□□□ 1.03
GRIN1-212ENST00000473811 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
GRIN1-212ENST00000473811 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
GRIN1-212ENST00000473811 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
GRIN1-212ENST00000473811 ZNF608Q9ULD9 1512 aaPredicted RBP21.4■■□□□ 1.02
GRIN1-212ENST00000473811 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
GRIN1-212ENST00000473811 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
GRIN1-212ENST00000473811 CUX1P39880 1505 aa21.36■■□□□ 1.01
GRIN1-212ENST00000473811 WDR97A6NE52 1622 aa21.31■■□□□ 1
GRIN1-212ENST00000473811 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
GRIN1-212ENST00000473811 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
GRIN1-212ENST00000473811 SOGA1O94964 1423 aa21.24■□□□□ 0.99
GRIN1-212ENST00000473811 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.99
GRIN1-212ENST00000473811 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
GRIN1-212ENST00000473811 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
GRIN1-212ENST00000473811 CHD1O14646 1710 aa21.16■□□□□ 0.98
GRIN1-212ENST00000473811 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
GRIN1-212ENST00000473811 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
GRIN1-212ENST00000473811 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
GRIN1-212ENST00000473811 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
GRIN1-212ENST00000473811 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
GRIN1-212ENST00000473811 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
GRIN1-212ENST00000473811 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
GRIN1-212ENST00000473811 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
GRIN1-212ENST00000473811 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
GRIN1-212ENST00000473811 SNAPC4Q5SXM2 1469 aa21.06■□□□□ 0.96
GRIN1-212ENST00000473811 GAPVD1Q14C86 1478 aa21.03■□□□□ 0.96
GRIN1-212ENST00000473811 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
GRIN1-212ENST00000473811 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
GRIN1-212ENST00000473811 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
GRIN1-212ENST00000473811 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
GRIN1-212ENST00000473811 ARHGEF11O15085 1522 aa20.95■□□□□ 0.94
GRIN1-212ENST00000473811 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
GRIN1-212ENST00000473811 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
GRIN1-212ENST00000473811 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
GRIN1-212ENST00000473811 FBLN2P98095 1184 aa20.87■□□□□ 0.93
GRIN1-212ENST00000473811 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
GRIN1-212ENST00000473811 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
GRIN1-212ENST00000473811 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
GRIN1-212ENST00000473811 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
GRIN1-212ENST00000473811 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
GRIN1-212ENST00000473811 NUP160Q12769 1436 aa20.77■□□□□ 0.91
GRIN1-212ENST00000473811 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
GRIN1-212ENST00000473811 SHROOM2Q13796 1616 aa20.68■□□□□ 0.9
GRIN1-212ENST00000473811 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
GRIN1-212ENST00000473811 CUL7Q14999 1698 aa20.66■□□□□ 0.9
GRIN1-212ENST00000473811 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
GRIN1-212ENST00000473811 IGF1RP08069 1367 aa20.6■□□□□ 0.89
GRIN1-212ENST00000473811 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms