RNA–Protein interactions for RNA: ENST00000473774.1

GABBR1-209, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 4

Gene GABBR1, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-209ENST00000473774 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
GABBR1-209ENST00000473774 CHIC1Q5VXU3 224 aa14.46□□□□□ -0.09
GABBR1-209ENST00000473774 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
GABBR1-209ENST00000473774 ABCC9O60706 1549 aa14.05□□□□□ -0.16
GABBR1-209ENST00000473774 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
GABBR1-209ENST00000473774 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
GABBR1-209ENST00000473774 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
GABBR1-209ENST00000473774 NACADO15069 1562 aa13.24□□□□□ -0.29
GABBR1-209ENST00000473774 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
GABBR1-209ENST00000473774 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
GABBR1-209ENST00000473774 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
GABBR1-209ENST00000473774 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
GABBR1-209ENST00000473774 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
GABBR1-209ENST00000473774 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
GABBR1-209ENST00000473774 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
GABBR1-209ENST00000473774 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
GABBR1-209ENST00000473774 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
GABBR1-209ENST00000473774 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
GABBR1-209ENST00000473774 CECR2Q9BXF3 1484 aa12.62□□□□□ -0.39
GABBR1-209ENST00000473774 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
GABBR1-209ENST00000473774 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
GABBR1-209ENST00000473774 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
GABBR1-209ENST00000473774 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
GABBR1-209ENST00000473774 CUX2O14529 1486 aa12.16□□□□□ -0.46
GABBR1-209ENST00000473774 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
GABBR1-209ENST00000473774 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
GABBR1-209ENST00000473774 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
GABBR1-209ENST00000473774 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
GABBR1-209ENST00000473774 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
GABBR1-209ENST00000473774 ATAD2BQ9ULI0 1458 aa12.07□□□□□ -0.48
GABBR1-209ENST00000473774 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
GABBR1-209ENST00000473774 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
GABBR1-209ENST00000473774 NESP48681 1621 aa12.01□□□□□ -0.49
GABBR1-209ENST00000473774 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
GABBR1-209ENST00000473774 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
GABBR1-209ENST00000473774 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
GABBR1-209ENST00000473774 PLPPR3Q6T4P5 718 aa11.92□□□□□ -0.5
GABBR1-209ENST00000473774 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
GABBR1-209ENST00000473774 KIF21AQ7Z4S6 1674 aa11.83□□□□□ -0.52
GABBR1-209ENST00000473774 PDS5BQ9NTI5 1447 aa11.83□□□□□ -0.52
GABBR1-209ENST00000473774 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
GABBR1-209ENST00000473774 WDR62O43379 1518 aa11.75□□□□□ -0.53
GABBR1-209ENST00000473774 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
GABBR1-209ENST00000473774 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
GABBR1-209ENST00000473774 CFTRP13569 1480 aa11.64□□□□□ -0.55
GABBR1-209ENST00000473774 CEP164Q9UPV0 1460 aa11.63□□□□□ -0.55
GABBR1-209ENST00000473774 WIZO95785 1651 aa11.62□□□□□ -0.55
GABBR1-209ENST00000473774 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
GABBR1-209ENST00000473774 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
GABBR1-209ENST00000473774 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
GABBR1-209ENST00000473774 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
GABBR1-209ENST00000473774 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
GABBR1-209ENST00000473774 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
GABBR1-209ENST00000473774 ABCC8Q09428 1581 aa11.48□□□□□ -0.57
GABBR1-209ENST00000473774 RIMBP3CA6NJZ7 1639 aa11.46□□□□□ -0.57
GABBR1-209ENST00000473774 RIMBP3BA6NNM3 1639 aa11.46□□□□□ -0.57
GABBR1-209ENST00000473774 RIMBP3Q9UFD9 1639 aa11.46□□□□□ -0.57
GABBR1-209ENST00000473774 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
GABBR1-209ENST00000473774 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.58
GABBR1-209ENST00000473774 WDR97A6NE52 1622 aa11.4□□□□□ -0.58
GABBR1-209ENST00000473774 CYB5RLQ6IPT4 315 aa11.4□□□□□ -0.58
GABBR1-209ENST00000473774 TRHP20396 242 aaPredicted RBP11.38□□□□□ -0.59
GABBR1-209ENST00000473774 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
GABBR1-209ENST00000473774 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
GABBR1-209ENST00000473774 TOPBP1Q92547 1522 aa11.36□□□□□ -0.59
GABBR1-209ENST00000473774 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
GABBR1-209ENST00000473774 FBLN2P98095 1184 aa11.33□□□□□ -0.6
GABBR1-209ENST00000473774 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
GABBR1-209ENST00000473774 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
GABBR1-209ENST00000473774 CHD1O14646 1710 aa11.29□□□□□ -0.6
GABBR1-209ENST00000473774 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 21.5
GABBR1-209ENST00000473774 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
GABBR1-209ENST00000473774 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
GABBR1-209ENST00000473774 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.61
GABBR1-209ENST00000473774 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
GABBR1-209ENST00000473774 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
GABBR1-209ENST00000473774 ADRA2BP18089 450 aa11.18□□□□□ -0.62
GABBR1-209ENST00000473774 CLASP1Q7Z460 1538 aa11.18□□□□□ -0.62
GABBR1-209ENST00000473774 SYNJ1O43426 1573 aa11.16□□□□□ -0.62
GABBR1-209ENST00000473774 FOXD1Q16676 465 aa11.14□□□□□ -0.63
GABBR1-209ENST00000473774 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
GABBR1-209ENST00000473774 SOGA1O94964 1423 aa11.13□□□□□ -0.63
GABBR1-209ENST00000473774 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
GABBR1-209ENST00000473774 SYNJ2O15056 1496 aa11.12□□□□□ -0.63
GABBR1-209ENST00000473774 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
GABBR1-209ENST00000473774 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
GABBR1-209ENST00000473774 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
GABBR1-209ENST00000473774 CUX1P39880 1505 aa11.1□□□□□ -0.63
GABBR1-209ENST00000473774 ABCA10Q8WWZ4 1543 aa11.1□□□□□ -0.63
GABBR1-209ENST00000473774 ABCA5Q8WWZ7 1642 aa11.09□□□□□ -0.63
GABBR1-209ENST00000473774 PBRM1Q86U86 1689 aa11.05□□□□□ -0.64
GABBR1-209ENST00000473774 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
GABBR1-209ENST00000473774 BIVM-ERCC5R4GMW8 1640 aa11.01□□□□□ -0.65
GABBR1-209ENST00000473774 NUP160Q12769 1436 aa11□□□□□ -0.65
GABBR1-209ENST00000473774 WRNQ14191 1432 aaPredicted RBP eCLIP11□□□□□ -0.65
GABBR1-209ENST00000473774 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
GABBR1-209ENST00000473774 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
GABBR1-209ENST00000473774 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
GABBR1-209ENST00000473774 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
GABBR1-209ENST00000473774 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms