RNA–Protein interactions for RNA: ENST00000473728.1

GCC1-202, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

TSL 3

Gene GCC1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-202ENST00000473728 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
GCC1-202ENST00000473728 CCDC180Q9P1Z9 1646 aa25.38■■□□□ 1.65
GCC1-202ENST00000473728 ABCC9O60706 1549 aa25.12■■□□□ 1.61
GCC1-202ENST00000473728 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
GCC1-202ENST00000473728 DCAF8L2P0C7V8 631 aa23.94■■□□□ 1.42
GCC1-202ENST00000473728 NACADO15069 1562 aa23.94■■□□□ 1.42
GCC1-202ENST00000473728 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
GCC1-202ENST00000473728 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
GCC1-202ENST00000473728 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
GCC1-202ENST00000473728 UNC13AQ9UPW8 1703 aa23.54■■□□□ 1.36
GCC1-202ENST00000473728 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
GCC1-202ENST00000473728 DNAJC5BQ9UF47 199 aa23.41■■□□□ 1.34
GCC1-202ENST00000473728 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
GCC1-202ENST00000473728 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
GCC1-202ENST00000473728 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
GCC1-202ENST00000473728 EIF4G1Q04637 1599 aaKnown RBP22.73■■□□□ 1.23
GCC1-202ENST00000473728 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
GCC1-202ENST00000473728 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
GCC1-202ENST00000473728 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
GCC1-202ENST00000473728 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
GCC1-202ENST00000473728 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
GCC1-202ENST00000473728 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
GCC1-202ENST00000473728 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.12
GCC1-202ENST00000473728 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
GCC1-202ENST00000473728 SMARCA2P51531 1590 aa22■■□□□ 1.11
GCC1-202ENST00000473728 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
GCC1-202ENST00000473728 PEG3Q9GZU2 1588 aa21.95■■□□□ 1.11
GCC1-202ENST00000473728 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
GCC1-202ENST00000473728 WIZO95785 1651 aa21.77■■□□□ 1.08
GCC1-202ENST00000473728 NESP48681 1621 aa21.73■■□□□ 1.07
GCC1-202ENST00000473728 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
GCC1-202ENST00000473728 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
GCC1-202ENST00000473728 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
GCC1-202ENST00000473728 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
GCC1-202ENST00000473728 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
GCC1-202ENST00000473728 CUX2O14529 1486 aa21.45■■□□□ 1.02
GCC1-202ENST00000473728 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
GCC1-202ENST00000473728 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.02
GCC1-202ENST00000473728 THOC2Q8NI27 1593 aaKnown RBP21.38■■□□□ 1.01
GCC1-202ENST00000473728 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
GCC1-202ENST00000473728 CFTRP13569 1480 aa21.31■■□□□ 1
GCC1-202ENST00000473728 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
GCC1-202ENST00000473728 FANCD2Q9BXW9 1451 aa21.21■□□□□ 0.99
GCC1-202ENST00000473728 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
GCC1-202ENST00000473728 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
GCC1-202ENST00000473728 DNAJC5Q9H3Z4 198 aa21.15■□□□□ 0.98
GCC1-202ENST00000473728 WDR62O43379 1518 aa21.14■□□□□ 0.98
GCC1-202ENST00000473728 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
GCC1-202ENST00000473728 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
GCC1-202ENST00000473728 SUPT5HO00267 1087 aaKnown RBP20.97■□□□□ 0.95
GCC1-202ENST00000473728 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
GCC1-202ENST00000473728 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
GCC1-202ENST00000473728 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
GCC1-202ENST00000473728 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
GCC1-202ENST00000473728 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
GCC1-202ENST00000473728 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
GCC1-202ENST00000473728 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
GCC1-202ENST00000473728 CUX1P39880 1505 aa20.66■□□□□ 0.9
GCC1-202ENST00000473728 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
GCC1-202ENST00000473728 AQRO60306 1485 aaKnown RBP eCLIP20.61■□□□□ 0.89
GCC1-202ENST00000473728 SOGA1O94964 1423 aa20.6■□□□□ 0.89
GCC1-202ENST00000473728 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
GCC1-202ENST00000473728 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
GCC1-202ENST00000473728 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
GCC1-202ENST00000473728 TDRD9Q8NDG6 1382 aaKnown RBP20.53■□□□□ 0.88
GCC1-202ENST00000473728 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
GCC1-202ENST00000473728 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
GCC1-202ENST00000473728 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
GCC1-202ENST00000473728 CHD1O14646 1710 aa20.39■□□□□ 0.85
GCC1-202ENST00000473728 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
GCC1-202ENST00000473728 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
GCC1-202ENST00000473728 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
GCC1-202ENST00000473728 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
GCC1-202ENST00000473728 FBLN2P98095 1184 aa20.35■□□□□ 0.85
GCC1-202ENST00000473728 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
GCC1-202ENST00000473728 GAPVD1Q14C86 1478 aa20.32■□□□□ 0.84
GCC1-202ENST00000473728 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
GCC1-202ENST00000473728 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
GCC1-202ENST00000473728 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
GCC1-202ENST00000473728 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
GCC1-202ENST00000473728 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
GCC1-202ENST00000473728 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
GCC1-202ENST00000473728 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
GCC1-202ENST00000473728 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
GCC1-202ENST00000473728 ARHGEF11O15085 1522 aa20.23■□□□□ 0.83
GCC1-202ENST00000473728 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
GCC1-202ENST00000473728 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
GCC1-202ENST00000473728 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
GCC1-202ENST00000473728 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
GCC1-202ENST00000473728 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
GCC1-202ENST00000473728 GRIN2AQ12879 1464 aa20.09■□□□□ 0.81
GCC1-202ENST00000473728 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
GCC1-202ENST00000473728 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
GCC1-202ENST00000473728 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
GCC1-202ENST00000473728 NUP160Q12769 1436 aa20.03■□□□□ 0.8
GCC1-202ENST00000473728 IGF1RP08069 1367 aa20.01■□□□□ 0.79
GCC1-202ENST00000473728 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
GCC1-202ENST00000473728 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
GCC1-202ENST00000473728 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
GCC1-202ENST00000473728 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms