RNA–Protein interactions for RNA: ENST00000473665.1

GGCX-207, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 2

Gene GGCX, Length 869 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-207ENST00000473665 NISCHQ9Y2I1 1504 aa30.97■■■□□ 2.55
GGCX-207ENST00000473665 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
GGCX-207ENST00000473665 ABCC9O60706 1549 aa28.05■■■□□ 2.08
GGCX-207ENST00000473665 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
GGCX-207ENST00000473665 CCDC180Q9P1Z9 1646 aa27.84■■■□□ 2.05
GGCX-207ENST00000473665 RB1CC1Q8TDY2 1594 aa26.64■■□□□ 1.86
GGCX-207ENST00000473665 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
GGCX-207ENST00000473665 NACADO15069 1562 aa26.43■■□□□ 1.82
GGCX-207ENST00000473665 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
GGCX-207ENST00000473665 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.77
GGCX-207ENST00000473665 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
GGCX-207ENST00000473665 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
GGCX-207ENST00000473665 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
GGCX-207ENST00000473665 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
GGCX-207ENST00000473665 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
GGCX-207ENST00000473665 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
GGCX-207ENST00000473665 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
GGCX-207ENST00000473665 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
GGCX-207ENST00000473665 CC2D2AQ9P2K1 1620 aa25.31■■□□□ 1.64
GGCX-207ENST00000473665 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
GGCX-207ENST00000473665 PHF23Q9BUL5 403 aaPredicted RBP24.9■■□□□ 1.58
GGCX-207ENST00000473665 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
GGCX-207ENST00000473665 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
GGCX-207ENST00000473665 CUX2O14529 1486 aa24.34■■□□□ 1.49
GGCX-207ENST00000473665 ATAD2BQ9ULI0 1458 aa24.29■■□□□ 1.48
GGCX-207ENST00000473665 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
GGCX-207ENST00000473665 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
GGCX-207ENST00000473665 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
GGCX-207ENST00000473665 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
GGCX-207ENST00000473665 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
GGCX-207ENST00000473665 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
GGCX-207ENST00000473665 NESP48681 1621 aa24.02■■□□□ 1.44
GGCX-207ENST00000473665 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
GGCX-207ENST00000473665 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
GGCX-207ENST00000473665 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
GGCX-207ENST00000473665 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
GGCX-207ENST00000473665 THOC2Q8NI27 1593 aaKnown RBP23.8■■□□□ 1.4
GGCX-207ENST00000473665 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
GGCX-207ENST00000473665 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.37
GGCX-207ENST00000473665 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
GGCX-207ENST00000473665 WDR62O43379 1518 aa23.49■■□□□ 1.35
GGCX-207ENST00000473665 WIZO95785 1651 aa23.48■■□□□ 1.35
GGCX-207ENST00000473665 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
GGCX-207ENST00000473665 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
GGCX-207ENST00000473665 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
GGCX-207ENST00000473665 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
GGCX-207ENST00000473665 CFTRP13569 1480 aa23.36■■□□□ 1.33
GGCX-207ENST00000473665 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
GGCX-207ENST00000473665 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
GGCX-207ENST00000473665 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
GGCX-207ENST00000473665 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
GGCX-207ENST00000473665 URB2Q14146 1524 aaKnown RBP23.17■■□□□ 1.3
GGCX-207ENST00000473665 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
GGCX-207ENST00000473665 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
GGCX-207ENST00000473665 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
GGCX-207ENST00000473665 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
GGCX-207ENST00000473665 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
GGCX-207ENST00000473665 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
GGCX-207ENST00000473665 RIMBP3CA6NJZ7 1639 aa22.82■■□□□ 1.24
GGCX-207ENST00000473665 RIMBP3BA6NNM3 1639 aa22.82■■□□□ 1.24
GGCX-207ENST00000473665 RIMBP3Q9UFD9 1639 aa22.82■■□□□ 1.24
GGCX-207ENST00000473665 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
GGCX-207ENST00000473665 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
GGCX-207ENST00000473665 EIF4G3O43432 1585 aaKnown RBP22.73■■□□□ 1.23
GGCX-207ENST00000473665 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.223e-9■■■■■ 30.5
GGCX-207ENST00000473665 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
GGCX-207ENST00000473665 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
GGCX-207ENST00000473665 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
GGCX-207ENST00000473665 FBLN2P98095 1184 aa22.61■■□□□ 1.21
GGCX-207ENST00000473665 SOGA1O94964 1423 aa22.57■■□□□ 1.2
GGCX-207ENST00000473665 CHD1O14646 1710 aa22.56■■□□□ 1.2
GGCX-207ENST00000473665 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
GGCX-207ENST00000473665 TDRD9Q8NDG6 1382 aaKnown RBP22.54■■□□□ 1.2
GGCX-207ENST00000473665 ARAP1Q96P48 1450 aa22.53■■□□□ 1.2
GGCX-207ENST00000473665 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
GGCX-207ENST00000473665 TRHP20396 242 aaPredicted RBP22.48■■□□□ 1.19
GGCX-207ENST00000473665 CHMP7Q8WUX9 453 aaPredicted RBP22.46■■□□□ 1.19
GGCX-207ENST00000473665 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
GGCX-207ENST00000473665 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
GGCX-207ENST00000473665 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
GGCX-207ENST00000473665 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
GGCX-207ENST00000473665 CUX1P39880 1505 aa22.4■■□□□ 1.18
GGCX-207ENST00000473665 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
GGCX-207ENST00000473665 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
GGCX-207ENST00000473665 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
GGCX-207ENST00000473665 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
GGCX-207ENST00000473665 ABCA10Q8WWZ4 1543 aa22.23■■□□□ 1.15
GGCX-207ENST00000473665 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
GGCX-207ENST00000473665 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
GGCX-207ENST00000473665 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
GGCX-207ENST00000473665 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
GGCX-207ENST00000473665 GRIN2AQ12879 1464 aa22.09■■□□□ 1.13
GGCX-207ENST00000473665 NUP160Q12769 1436 aa22.05■■□□□ 1.12
GGCX-207ENST00000473665 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
GGCX-207ENST00000473665 ADAMTS12P58397 1594 aa22■■□□□ 1.11
GGCX-207ENST00000473665 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
GGCX-207ENST00000473665 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
GGCX-207ENST00000473665 ERCC6L2Q5T890 1561 aa21.96■■□□□ 1.11
GGCX-207ENST00000473665 BIVM-ERCC5R4GMW8 1640 aa21.96■■□□□ 1.11
GGCX-207ENST00000473665 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms