RNA–Protein interactions for RNA: ENST00000473638.5

RPL3-214, Transcript of ribosomal protein L3, humanhuman

TSL 2

Gene RPL3, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-214ENST00000473638 NISCHQ9Y2I1 1504 aa43.8■■■■■ 4.6
RPL3-214ENST00000473638 CCDC180Q9P1Z9 1646 aa38.96■■■■□ 3.83
RPL3-214ENST00000473638 ABCC9O60706 1549 aa37.95■■■■□ 3.67
RPL3-214ENST00000473638 ZCCHC6Q5VYS8 1495 aaKnown RBP36.55■■■■□ 3.44
RPL3-214ENST00000473638 NACADO15069 1562 aa36.54■■■■□ 3.44
RPL3-214ENST00000473638 RB1CC1Q8TDY2 1594 aa36.53■■■■□ 3.44
RPL3-214ENST00000473638 MYO15BQ96JP2 1530 aa36.4■■■■□ 3.42
RPL3-214ENST00000473638 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
RPL3-214ENST00000473638 DCAF8L2P0C7V8 631 aa36.22■■■■□ 3.39
RPL3-214ENST00000473638 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
RPL3-214ENST00000473638 BICRAQ9NZM4 1560 aa35.61■■■■□ 3.29
RPL3-214ENST00000473638 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
RPL3-214ENST00000473638 PABPN1Q86U42 306 aaKnown RBP eCLIP35.4■■■■□ 3.26
RPL3-214ENST00000473638 SHROOM4Q9ULL8 1493 aa35.12■■■■□ 3.21
RPL3-214ENST00000473638 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
RPL3-214ENST00000473638 EIF4G1Q04637 1599 aaKnown RBP34.56■■■■□ 3.12
RPL3-214ENST00000473638 CC2D2AQ9P2K1 1620 aa34.4■■■■□ 3.1
RPL3-214ENST00000473638 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
RPL3-214ENST00000473638 SMARCA4P51532 1647 aa34■■■■□ 3.03
RPL3-214ENST00000473638 BAZ1AQ9NRL2 1556 aaPredicted RBP33.89■■■■□ 3.02
RPL3-214ENST00000473638 MROH2BQ7Z745 1585 aa33.78■■■■□ 3
RPL3-214ENST00000473638 ATAD2BQ9ULI0 1458 aa33.76■■■■□ 3
RPL3-214ENST00000473638 NCAPD3P42695 1498 aa33.73■■■□□ 2.99
RPL3-214ENST00000473638 PEG3Q9GZU2 1588 aa33.72■■■□□ 2.99
RPL3-214ENST00000473638 SMARCA2P51531 1590 aa33.68■■■□□ 2.98
RPL3-214ENST00000473638 HMGXB3Q12766 1538 aa33.6■■■□□ 2.97
RPL3-214ENST00000473638 BAZ1BQ9UIG0 1483 aaKnown RBP33.42■■■□□ 2.94
RPL3-214ENST00000473638 WIZO95785 1651 aa33.42■■■□□ 2.94
RPL3-214ENST00000473638 RSF1Q96T23 1441 aaPredicted RBP33.37■■■□□ 2.93
RPL3-214ENST00000473638 TOP2AP11388 1531 aaKnown RBP33.05■■■□□ 2.88
RPL3-214ENST00000473638 NESP48681 1621 aa32.93■■■□□ 2.86
RPL3-214ENST00000473638 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
RPL3-214ENST00000473638 CADPSQ9ULU8 1353 aa32.68■■■□□ 2.82
RPL3-214ENST00000473638 CCDC88BA6NC98 1476 aa32.63■■■□□ 2.81
RPL3-214ENST00000473638 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
RPL3-214ENST00000473638 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
RPL3-214ENST00000473638 CFTRP13569 1480 aa32.57■■■□□ 2.8
RPL3-214ENST00000473638 THOC2Q8NI27 1593 aaKnown RBP32.49■■■□□ 2.79
RPL3-214ENST00000473638 PDS5BQ9NTI5 1447 aa32.48■■■□□ 2.79
RPL3-214ENST00000473638 PRDM2Q13029 1718 aa32.4■■■□□ 2.78
RPL3-214ENST00000473638 CUX2O14529 1486 aa32.35■■■□□ 2.77
RPL3-214ENST00000473638 SUPT5HO00267 1087 aaKnown RBP32.34■■■□□ 2.77
RPL3-214ENST00000473638 FANCD2Q9BXW9 1451 aa32.33■■■□□ 2.77
RPL3-214ENST00000473638 CEP164Q9UPV0 1460 aa32.26■■■□□ 2.75
RPL3-214ENST00000473638 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
RPL3-214ENST00000473638 WDR62O43379 1518 aa32.21■■■□□ 2.75
RPL3-214ENST00000473638 URB2Q14146 1524 aaKnown RBP32.1■■■□□ 2.73
RPL3-214ENST00000473638 TOPBP1Q92547 1522 aa31.87■■■□□ 2.69
RPL3-214ENST00000473638 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
RPL3-214ENST00000473638 ABCC8Q09428 1581 aa31.75■■■□□ 2.67
RPL3-214ENST00000473638 CUX1P39880 1505 aa31.69■■■□□ 2.66
RPL3-214ENST00000473638 POLA1P09884 1462 aaPredicted RBP31.61■■■□□ 2.65
RPL3-214ENST00000473638 IFT140Q96RY7 1462 aa31.59■■■□□ 2.65
RPL3-214ENST00000473638 TARBP1Q13395 1621 aaKnown RBP31.59■■■□□ 2.65
RPL3-214ENST00000473638 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
RPL3-214ENST00000473638 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
RPL3-214ENST00000473638 SYNJ1O43426 1573 aa31.45■■■□□ 2.63
RPL3-214ENST00000473638 BIVM-ERCC5R4GMW8 1640 aa31.45■■■□□ 2.62
RPL3-214ENST00000473638 RAD54L2Q9Y4B4 1467 aa31.45■■■□□ 2.62
RPL3-214ENST00000473638 EIF4G3O43432 1585 aaKnown RBP31.43■■■□□ 2.62
RPL3-214ENST00000473638 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
RPL3-214ENST00000473638 WRNQ14191 1432 aaPredicted RBP eCLIP31.4■■■□□ 2.62
RPL3-214ENST00000473638 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
RPL3-214ENST00000473638 SOGA1O94964 1423 aa31.37■■■□□ 2.61
RPL3-214ENST00000473638 AQRO60306 1485 aaKnown RBP eCLIP31.28■■■□□ 2.61e-8■■■■■ 37.9
RPL3-214ENST00000473638 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
RPL3-214ENST00000473638 ABCA10Q8WWZ4 1543 aa31.23■■■□□ 2.59
RPL3-214ENST00000473638 TDRD9Q8NDG6 1382 aaKnown RBP31.2■■■□□ 2.59
RPL3-214ENST00000473638 ABCA5Q8WWZ7 1642 aa31.18■■■□□ 2.58
RPL3-214ENST00000473638 PBRM1Q86U86 1689 aa31.08■■■□□ 2.57
RPL3-214ENST00000473638 GAPVD1Q14C86 1478 aa31.04■■■□□ 2.56
RPL3-214ENST00000473638 GRIN2BQ13224 1484 aa31.03■■■□□ 2.56
RPL3-214ENST00000473638 CHD1O14646 1710 aa31.02■■■□□ 2.56
RPL3-214ENST00000473638 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.56
RPL3-214ENST00000473638 MAGI1Q96QZ7 1491 aaPredicted RBP30.97■■■□□ 2.55
RPL3-214ENST00000473638 OSCARQ8IYS5 282 aa30.86■■■□□ 2.53
RPL3-214ENST00000473638 SYNJ2O15056 1496 aa30.85■■■□□ 2.53
RPL3-214ENST00000473638 ADAMTS12P58397 1594 aa30.84■■■□□ 2.53
RPL3-214ENST00000473638 ERICH3Q5RHP9 1530 aa30.84■■■□□ 2.53
RPL3-214ENST00000473638 CLASP1Q7Z460 1538 aa30.72■■■□□ 2.51
RPL3-214ENST00000473638 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
RPL3-214ENST00000473638 FHAD1B1AJZ9 1412 aa30.68■■■□□ 2.5
RPL3-214ENST00000473638 FBLN2P98095 1184 aa30.68■■■□□ 2.5
RPL3-214ENST00000473638 GRIN2AQ12879 1464 aa30.68■■■□□ 2.5
RPL3-214ENST00000473638 CHMP7Q8WUX9 453 aaPredicted RBP30.65■■■□□ 2.5
RPL3-214ENST00000473638 IGF1RP08069 1367 aa30.63■■■□□ 2.49
RPL3-214ENST00000473638 CEP170Q5SW79 1584 aa30.59■■■□□ 2.49
RPL3-214ENST00000473638 NUP160Q12769 1436 aa30.58■■■□□ 2.49
RPL3-214ENST00000473638 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
RPL3-214ENST00000473638 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
RPL3-214ENST00000473638 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
RPL3-214ENST00000473638 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.49
RPL3-214ENST00000473638 CUL7Q14999 1698 aa30.57■■■□□ 2.48
RPL3-214ENST00000473638 ARHGEF11O15085 1522 aa30.55■■■□□ 2.48
RPL3-214ENST00000473638 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
RPL3-214ENST00000473638 SHROOM2Q13796 1616 aa30.4■■■□□ 2.46
RPL3-214ENST00000473638 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
RPL3-214ENST00000473638 ARAP1Q96P48 1450 aa30.34■■■□□ 2.45
RPL3-214ENST00000473638 CHIC1Q5VXU3 224 aa30.32■■■□□ 2.44
RPL3-214ENST00000473638 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms