RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
SATB2-208ENST00000473517 ABCC9O60706 1549 aa20.43■□□□□ 0.86
SATB2-208ENST00000473517 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
SATB2-208ENST00000473517 CCDC180Q9P1Z9 1646 aa19.53■□□□□ 0.72
SATB2-208ENST00000473517 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
SATB2-208ENST00000473517 DNAJC5Q9H3Z4 198 aa19.05■□□□□ 0.64
SATB2-208ENST00000473517 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
SATB2-208ENST00000473517 NACADO15069 1562 aa18.76■□□□□ 0.59
SATB2-208ENST00000473517 CECR2Q9BXF3 1484 aa18.53■□□□□ 0.56
SATB2-208ENST00000473517 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
SATB2-208ENST00000473517 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
SATB2-208ENST00000473517 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
SATB2-208ENST00000473517 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
SATB2-208ENST00000473517 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
SATB2-208ENST00000473517 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
SATB2-208ENST00000473517 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
SATB2-208ENST00000473517 CUX2O14529 1486 aa18.01■□□□□ 0.47
SATB2-208ENST00000473517 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
SATB2-208ENST00000473517 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
SATB2-208ENST00000473517 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
SATB2-208ENST00000473517 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
SATB2-208ENST00000473517 ZCCHC6Q5VYS8 1495 aaKnown RBP17.57■□□□□ 0.4
SATB2-208ENST00000473517 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
SATB2-208ENST00000473517 NESP48681 1621 aa17.29■□□□□ 0.36
SATB2-208ENST00000473517 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
SATB2-208ENST00000473517 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
SATB2-208ENST00000473517 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
SATB2-208ENST00000473517 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
SATB2-208ENST00000473517 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
SATB2-208ENST00000473517 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
SATB2-208ENST00000473517 AEBP2Q6ZN18 517 aaPredicted RBP17.05■□□□□ 0.32
SATB2-208ENST00000473517 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
SATB2-208ENST00000473517 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
SATB2-208ENST00000473517 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
SATB2-208ENST00000473517 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
SATB2-208ENST00000473517 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
SATB2-208ENST00000473517 WDR62O43379 1518 aa16.87■□□□□ 0.29
SATB2-208ENST00000473517 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
SATB2-208ENST00000473517 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
SATB2-208ENST00000473517 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
SATB2-208ENST00000473517 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
SATB2-208ENST00000473517 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
SATB2-208ENST00000473517 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
SATB2-208ENST00000473517 PEG3Q9GZU2 1588 aa16.74■□□□□ 0.27
SATB2-208ENST00000473517 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
SATB2-208ENST00000473517 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
SATB2-208ENST00000473517 CHIC1Q5VXU3 224 aa16.68■□□□□ 0.26
SATB2-208ENST00000473517 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
SATB2-208ENST00000473517 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
SATB2-208ENST00000473517 ARAP1Q96P48 1450 aa16.51■□□□□ 0.23
SATB2-208ENST00000473517 MROH2BQ7Z745 1585 aa16.48■□□□□ 0.23
SATB2-208ENST00000473517 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
SATB2-208ENST00000473517 CFTRP13569 1480 aa16.42■□□□□ 0.22
SATB2-208ENST00000473517 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
SATB2-208ENST00000473517 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
SATB2-208ENST00000473517 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
SATB2-208ENST00000473517 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
SATB2-208ENST00000473517 FBLN2P98095 1184 aa16.28■□□□□ 0.2
SATB2-208ENST00000473517 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.18
SATB2-208ENST00000473517 CHD1O14646 1710 aa16.19■□□□□ 0.18
SATB2-208ENST00000473517 WIZO95785 1651 aa16.18■□□□□ 0.18
SATB2-208ENST00000473517 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.18
SATB2-208ENST00000473517 TOPBP1Q92547 1522 aa16.14■□□□□ 0.18
SATB2-208ENST00000473517 ABCC8Q09428 1581 aa16.12■□□□□ 0.17
SATB2-208ENST00000473517 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
SATB2-208ENST00000473517 CHMP7Q8WUX9 453 aaPredicted RBP16.05■□□□□ 0.16
SATB2-208ENST00000473517 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
SATB2-208ENST00000473517 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
SATB2-208ENST00000473517 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
SATB2-208ENST00000473517 KDM4FA0A1W2PPD8 638 aa16■□□□□ 0.15
SATB2-208ENST00000473517 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
SATB2-208ENST00000473517 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
SATB2-208ENST00000473517 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
SATB2-208ENST00000473517 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
SATB2-208ENST00000473517 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
SATB2-208ENST00000473517 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
SATB2-208ENST00000473517 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
SATB2-208ENST00000473517 SOGA1O94964 1423 aa15.89■□□□□ 0.13
SATB2-208ENST00000473517 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
SATB2-208ENST00000473517 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
SATB2-208ENST00000473517 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
SATB2-208ENST00000473517 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
SATB2-208ENST00000473517 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
SATB2-208ENST00000473517 FAM69CQ0P6D2 419 aa15.78■□□□□ 0.12
SATB2-208ENST00000473517 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.11
SATB2-208ENST00000473517 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
SATB2-208ENST00000473517 FBXO41Q8TF61 875 aa15.74■□□□□ 0.11
SATB2-208ENST00000473517 ABCC10Q5T3U5 1492 aa15.72■□□□□ 0.11
SATB2-208ENST00000473517 FGD5Q6ZNL6 1462 aa15.7■□□□□ 0.1
SATB2-208ENST00000473517 KDM6BO15054 1643 aa15.67■□□□□ 0.1
SATB2-208ENST00000473517 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
SATB2-208ENST00000473517 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
SATB2-208ENST00000473517 HECW2Q9P2P5 1572 aa15.62■□□□□ 0.09
SATB2-208ENST00000473517 NUP160Q12769 1436 aa15.61■□□□□ 0.09
SATB2-208ENST00000473517 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
SATB2-208ENST00000473517 ADGRL1O94910 1474 aa15.59■□□□□ 0.09
SATB2-208ENST00000473517 MAPKBP1O60336 1514 aa15.59■□□□□ 0.09
SATB2-208ENST00000473517 DIP2BQ9P265 1576 aa15.58■□□□□ 0.08
SATB2-208ENST00000473517 SHROOM2Q13796 1616 aa15.56■□□□□ 0.08
SATB2-208ENST00000473517 PBRM1Q86U86 1689 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms