RNA–Protein interactions for RNA: ENST00000473397.1

RWDD3-204, Transcript of RWD domain containing 3, humanhuman

TSL 3

Gene RWDD3, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RWDD3-204ENST00000473397 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
RWDD3-204ENST00000473397 ABCC9O60706 1549 aa27.22■■□□□ 1.95
RWDD3-204ENST00000473397 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
RWDD3-204ENST00000473397 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
RWDD3-204ENST00000473397 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
RWDD3-204ENST00000473397 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
RWDD3-204ENST00000473397 NACADO15069 1562 aa25.52■■□□□ 1.68
RWDD3-204ENST00000473397 AEBP2Q6ZN18 517 aaPredicted RBP25.37■■□□□ 1.65
RWDD3-204ENST00000473397 PABPN1Q86U42 306 aaKnown RBP eCLIP25.37■■□□□ 1.65
RWDD3-204ENST00000473397 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
RWDD3-204ENST00000473397 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
RWDD3-204ENST00000473397 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
RWDD3-204ENST00000473397 SHROOM4Q9ULL8 1493 aa24.69■■□□□ 1.54
RWDD3-204ENST00000473397 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
RWDD3-204ENST00000473397 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
RWDD3-204ENST00000473397 CC2D2AQ9P2K1 1620 aa24.53■■□□□ 1.52
RWDD3-204ENST00000473397 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
RWDD3-204ENST00000473397 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
RWDD3-204ENST00000473397 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
RWDD3-204ENST00000473397 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
RWDD3-204ENST00000473397 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
RWDD3-204ENST00000473397 CUX2O14529 1486 aa23.68■■□□□ 1.38
RWDD3-204ENST00000473397 ERCC6Q03468 1493 aa23.65■■□□□ 1.38
RWDD3-204ENST00000473397 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
RWDD3-204ENST00000473397 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
RWDD3-204ENST00000473397 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
RWDD3-204ENST00000473397 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
RWDD3-204ENST00000473397 NESP48681 1621 aa23.21■■□□□ 1.31
RWDD3-204ENST00000473397 SMARCA4P51532 1647 aa23.21■■□□□ 1.31
RWDD3-204ENST00000473397 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
RWDD3-204ENST00000473397 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
RWDD3-204ENST00000473397 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
RWDD3-204ENST00000473397 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
RWDD3-204ENST00000473397 TRIM41Q8WV44 630 aa23■■□□□ 1.27
RWDD3-204ENST00000473397 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
RWDD3-204ENST00000473397 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
RWDD3-204ENST00000473397 CADPSQ9ULU8 1353 aa22.89■■□□□ 1.25
RWDD3-204ENST00000473397 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
RWDD3-204ENST00000473397 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
RWDD3-204ENST00000473397 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
RWDD3-204ENST00000473397 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
RWDD3-204ENST00000473397 WDR62O43379 1518 aa22.67■■□□□ 1.22
RWDD3-204ENST00000473397 CEP164Q9UPV0 1460 aa22.63■■□□□ 1.21
RWDD3-204ENST00000473397 FANCD2Q9BXW9 1451 aa22.56■■□□□ 1.2
RWDD3-204ENST00000473397 WIZO95785 1651 aa22.52■■□□□ 1.2
RWDD3-204ENST00000473397 CFTRP13569 1480 aa22.47■■□□□ 1.19
RWDD3-204ENST00000473397 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
RWDD3-204ENST00000473397 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
RWDD3-204ENST00000473397 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
RWDD3-204ENST00000473397 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
RWDD3-204ENST00000473397 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
RWDD3-204ENST00000473397 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
RWDD3-204ENST00000473397 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
RWDD3-204ENST00000473397 CYB5RLQ6IPT4 315 aa22.17■■□□□ 1.14
RWDD3-204ENST00000473397 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
RWDD3-204ENST00000473397 TRHP20396 242 aaPredicted RBP22.12■■□□□ 1.13
RWDD3-204ENST00000473397 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
RWDD3-204ENST00000473397 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
RWDD3-204ENST00000473397 FBLN2P98095 1184 aa22.07■■□□□ 1.12
RWDD3-204ENST00000473397 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
RWDD3-204ENST00000473397 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
RWDD3-204ENST00000473397 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
RWDD3-204ENST00000473397 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.16e-9■■■■■ 45.1
RWDD3-204ENST00000473397 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
RWDD3-204ENST00000473397 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
RWDD3-204ENST00000473397 CHMP7Q8WUX9 453 aaPredicted RBP21.85■■□□□ 1.09
RWDD3-204ENST00000473397 SOGA1O94964 1423 aa21.82■■□□□ 1.08
RWDD3-204ENST00000473397 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
RWDD3-204ENST00000473397 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
RWDD3-204ENST00000473397 CHD1O14646 1710 aa21.81■■□□□ 1.08
RWDD3-204ENST00000473397 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
RWDD3-204ENST00000473397 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
RWDD3-204ENST00000473397 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
RWDD3-204ENST00000473397 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
RWDD3-204ENST00000473397 SYNJ1O43426 1573 aa21.66■■□□□ 1.06
RWDD3-204ENST00000473397 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
RWDD3-204ENST00000473397 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
RWDD3-204ENST00000473397 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
RWDD3-204ENST00000473397 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
RWDD3-204ENST00000473397 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
RWDD3-204ENST00000473397 SYNJ2O15056 1496 aa21.59■■□□□ 1.05
RWDD3-204ENST00000473397 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
RWDD3-204ENST00000473397 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
RWDD3-204ENST00000473397 CUX1P39880 1505 aa21.47■■□□□ 1.03
RWDD3-204ENST00000473397 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
RWDD3-204ENST00000473397 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
RWDD3-204ENST00000473397 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
RWDD3-204ENST00000473397 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
RWDD3-204ENST00000473397 GRIN2AQ12879 1464 aa21.29■■□□□ 1
RWDD3-204ENST00000473397 NPM1P06748 294 aaKnown RBP eCLIP21.28■■□□□ 1
RWDD3-204ENST00000473397 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
RWDD3-204ENST00000473397 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
RWDD3-204ENST00000473397 NUP160Q12769 1436 aa21.22■□□□□ 0.99
RWDD3-204ENST00000473397 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
RWDD3-204ENST00000473397 JPH4Q96JJ6 628 aa21.2■□□□□ 0.98
RWDD3-204ENST00000473397 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
RWDD3-204ENST00000473397 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
RWDD3-204ENST00000473397 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
RWDD3-204ENST00000473397 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.98
RWDD3-204ENST00000473397 ADAMTS12P58397 1594 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms