RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 NISCHQ9Y2I1 1504 aa23.75■■□□□ 1.39
BRD3-205ENST00000473349 AEBP2Q6ZN18 517 aaPredicted RBP23.26■■□□□ 1.31
BRD3-205ENST00000473349 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
BRD3-205ENST00000473349 ABCC9O60706 1549 aa21.38■■□□□ 1.01
BRD3-205ENST00000473349 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
BRD3-205ENST00000473349 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
BRD3-205ENST00000473349 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
BRD3-205ENST00000473349 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
BRD3-205ENST00000473349 NACADO15069 1562 aa20.08■□□□□ 0.8
BRD3-205ENST00000473349 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
BRD3-205ENST00000473349 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
BRD3-205ENST00000473349 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
BRD3-205ENST00000473349 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
BRD3-205ENST00000473349 BICRAQ9NZM4 1560 aa19.72■□□□□ 0.75
BRD3-205ENST00000473349 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
BRD3-205ENST00000473349 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
BRD3-205ENST00000473349 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
BRD3-205ENST00000473349 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
BRD3-205ENST00000473349 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
BRD3-205ENST00000473349 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
BRD3-205ENST00000473349 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
BRD3-205ENST00000473349 CECR2Q9BXF3 1484 aa19.2■□□□□ 0.66
BRD3-205ENST00000473349 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
BRD3-205ENST00000473349 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
BRD3-205ENST00000473349 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
BRD3-205ENST00000473349 FOXD1Q16676 465 aa18.44■□□□□ 0.54
BRD3-205ENST00000473349 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
BRD3-205ENST00000473349 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
BRD3-205ENST00000473349 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
BRD3-205ENST00000473349 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
BRD3-205ENST00000473349 NESP48681 1621 aa18.39■□□□□ 0.53
BRD3-205ENST00000473349 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
BRD3-205ENST00000473349 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
BRD3-205ENST00000473349 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
BRD3-205ENST00000473349 PEG3Q9GZU2 1588 aa18.29■□□□□ 0.52
BRD3-205ENST00000473349 CUX2O14529 1486 aa18.28■□□□□ 0.52
BRD3-205ENST00000473349 WIZO95785 1651 aa18.15■□□□□ 0.5
BRD3-205ENST00000473349 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
BRD3-205ENST00000473349 LAMC3Q9Y6N6 1575 aa18.12■□□□□ 0.49
BRD3-205ENST00000473349 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
BRD3-205ENST00000473349 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
BRD3-205ENST00000473349 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.47
BRD3-205ENST00000473349 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
BRD3-205ENST00000473349 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
BRD3-205ENST00000473349 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
BRD3-205ENST00000473349 TOP2AP11388 1531 aaKnown RBP17.86■□□□□ 0.45
BRD3-205ENST00000473349 WDR62O43379 1518 aa17.85■□□□□ 0.45
BRD3-205ENST00000473349 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
BRD3-205ENST00000473349 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.45
BRD3-205ENST00000473349 CFTRP13569 1480 aa17.81■□□□□ 0.44
BRD3-205ENST00000473349 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
BRD3-205ENST00000473349 CCDC88BA6NC98 1476 aa17.7■□□□□ 0.42
BRD3-205ENST00000473349 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
BRD3-205ENST00000473349 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
BRD3-205ENST00000473349 ZNF608Q9ULD9 1512 aaPredicted RBP17.53■□□□□ 0.4
BRD3-205ENST00000473349 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
BRD3-205ENST00000473349 OSCARQ8IYS5 282 aa17.49■□□□□ 0.39
BRD3-205ENST00000473349 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
BRD3-205ENST00000473349 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
BRD3-205ENST00000473349 EIF4G3O43432 1585 aaKnown RBP17.38■□□□□ 0.37
BRD3-205ENST00000473349 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.372e-6■■■□□ 14.7
BRD3-205ENST00000473349 PPP6R1Q9UPN7 881 aa17.36■□□□□ 0.37
BRD3-205ENST00000473349 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
BRD3-205ENST00000473349 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
BRD3-205ENST00000473349 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
BRD3-205ENST00000473349 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.37
BRD3-205ENST00000473349 ADRA2BP18089 450 aa17.32■□□□□ 0.36
BRD3-205ENST00000473349 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
BRD3-205ENST00000473349 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
BRD3-205ENST00000473349 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
BRD3-205ENST00000473349 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
BRD3-205ENST00000473349 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
BRD3-205ENST00000473349 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
BRD3-205ENST00000473349 CHD1O14646 1710 aa17.26■□□□□ 0.35
BRD3-205ENST00000473349 SOGA1O94964 1423 aa17.25■□□□□ 0.35
BRD3-205ENST00000473349 FBLN2P98095 1184 aa17.25■□□□□ 0.35
BRD3-205ENST00000473349 ARHGEF11O15085 1522 aa17.25■□□□□ 0.35
BRD3-205ENST00000473349 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
BRD3-205ENST00000473349 CUX1P39880 1505 aa17.24■□□□□ 0.35
BRD3-205ENST00000473349 MSH5O43196 834 aa17.23■□□□□ 0.35
BRD3-205ENST00000473349 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
BRD3-205ENST00000473349 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
BRD3-205ENST00000473349 ARAP1Q96P48 1450 aa17.11■□□□□ 0.33
BRD3-205ENST00000473349 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
BRD3-205ENST00000473349 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
BRD3-205ENST00000473349 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
BRD3-205ENST00000473349 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
BRD3-205ENST00000473349 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
BRD3-205ENST00000473349 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
BRD3-205ENST00000473349 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
BRD3-205ENST00000473349 SYNJ2O15056 1496 aa17■□□□□ 0.31
BRD3-205ENST00000473349 ABCA10Q8WWZ4 1543 aa17■□□□□ 0.31
BRD3-205ENST00000473349 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
BRD3-205ENST00000473349 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
BRD3-205ENST00000473349 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
BRD3-205ENST00000473349 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
BRD3-205ENST00000473349 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
BRD3-205ENST00000473349 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
BRD3-205ENST00000473349 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
BRD3-205ENST00000473349 GRIN2AQ12879 1464 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms