RNA–Protein interactions for RNA: ENST00000473218.5

RHBDD1-211, Transcript of rhomboid domain containing 1, humanhuman

TSL 2

Gene RHBDD1, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-211ENST00000473218 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
RHBDD1-211ENST00000473218 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
RHBDD1-211ENST00000473218 CHIC1Q5VXU3 224 aa14.61□□□□□ -0.07
RHBDD1-211ENST00000473218 ABCC9O60706 1549 aa14.47□□□□□ -0.09
RHBDD1-211ENST00000473218 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
RHBDD1-211ENST00000473218 RB1CC1Q8TDY2 1594 aa13.76□□□□□ -0.21
RHBDD1-211ENST00000473218 DCAF8L2P0C7V8 631 aa13.75□□□□□ -0.21
RHBDD1-211ENST00000473218 NACADO15069 1562 aa13.66□□□□□ -0.22
RHBDD1-211ENST00000473218 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
RHBDD1-211ENST00000473218 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
RHBDD1-211ENST00000473218 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
RHBDD1-211ENST00000473218 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
RHBDD1-211ENST00000473218 ZCCHC6Q5VYS8 1495 aaKnown RBP13.39□□□□□ -0.27
RHBDD1-211ENST00000473218 BICRAQ9NZM4 1560 aa13.33□□□□□ -0.28
RHBDD1-211ENST00000473218 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
RHBDD1-211ENST00000473218 SCRIBQ14160 1630 aa13.25□□□□□ -0.29
RHBDD1-211ENST00000473218 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
RHBDD1-211ENST00000473218 CC2D2AQ9P2K1 1620 aa13.05□□□□□ -0.32
RHBDD1-211ENST00000473218 EIF4G1Q04637 1599 aaKnown RBP13.02□□□□□ -0.33
RHBDD1-211ENST00000473218 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
RHBDD1-211ENST00000473218 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
RHBDD1-211ENST00000473218 PHF23Q9BUL5 403 aaPredicted RBP12.77□□□□□ -0.37
RHBDD1-211ENST00000473218 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
RHBDD1-211ENST00000473218 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
RHBDD1-211ENST00000473218 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
RHBDD1-211ENST00000473218 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
RHBDD1-211ENST00000473218 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
RHBDD1-211ENST00000473218 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
RHBDD1-211ENST00000473218 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
RHBDD1-211ENST00000473218 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
RHBDD1-211ENST00000473218 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
RHBDD1-211ENST00000473218 NESP48681 1621 aa12.44□□□□□ -0.42
RHBDD1-211ENST00000473218 PEG3Q9GZU2 1588 aa12.43□□□□□ -0.42
RHBDD1-211ENST00000473218 CUX2O14529 1486 aa12.39□□□□□ -0.43
RHBDD1-211ENST00000473218 WIZO95785 1651 aa12.35□□□□□ -0.43
RHBDD1-211ENST00000473218 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
RHBDD1-211ENST00000473218 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
RHBDD1-211ENST00000473218 KIF21AQ7Z4S6 1674 aa12.29□□□□□ -0.44
RHBDD1-211ENST00000473218 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
RHBDD1-211ENST00000473218 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
RHBDD1-211ENST00000473218 CADPSQ9ULU8 1353 aa12.24□□□□□ -0.45
RHBDD1-211ENST00000473218 RSF1Q96T23 1441 aaPredicted RBP12.22□□□□□ -0.45
RHBDD1-211ENST00000473218 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
RHBDD1-211ENST00000473218 MRC2Q9UBG0 1479 aa12.15□□□□□ -0.46
RHBDD1-211ENST00000473218 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
RHBDD1-211ENST00000473218 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
RHBDD1-211ENST00000473218 WDR62O43379 1518 aa12.1□□□□□ -0.47
RHBDD1-211ENST00000473218 CFTRP13569 1480 aa12.09□□□□□ -0.47
RHBDD1-211ENST00000473218 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
RHBDD1-211ENST00000473218 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
RHBDD1-211ENST00000473218 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
RHBDD1-211ENST00000473218 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
RHBDD1-211ENST00000473218 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
RHBDD1-211ENST00000473218 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
RHBDD1-211ENST00000473218 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
RHBDD1-211ENST00000473218 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
RHBDD1-211ENST00000473218 ABCC8Q09428 1581 aa11.85□□□□□ -0.51
RHBDD1-211ENST00000473218 DNMBPQ6XZF7 1577 aa11.85□□□□□ -0.51
RHBDD1-211ENST00000473218 FOXD1Q16676 465 aa11.85□□□□□ -0.51
RHBDD1-211ENST00000473218 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
RHBDD1-211ENST00000473218 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
RHBDD1-211ENST00000473218 EIF4G3O43432 1585 aaKnown RBP11.8□□□□□ -0.52
RHBDD1-211ENST00000473218 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
RHBDD1-211ENST00000473218 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
RHBDD1-211ENST00000473218 TARBP1Q13395 1621 aaKnown RBP11.77□□□□□ -0.53
RHBDD1-211ENST00000473218 FBLN2P98095 1184 aa11.76□□□□□ -0.53
RHBDD1-211ENST00000473218 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
RHBDD1-211ENST00000473218 SOGA1O94964 1423 aa11.74□□□□□ -0.53
RHBDD1-211ENST00000473218 CHD1O14646 1710 aa11.72□□□□□ -0.53
RHBDD1-211ENST00000473218 FGD5Q6ZNL6 1462 aa11.72□□□□□ -0.53
RHBDD1-211ENST00000473218 TDRD9Q8NDG6 1382 aaKnown RBP11.72□□□□□ -0.53
RHBDD1-211ENST00000473218 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.53
RHBDD1-211ENST00000473218 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.53
RHBDD1-211ENST00000473218 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.53
RHBDD1-211ENST00000473218 CUX1P39880 1505 aa11.7□□□□□ -0.54
RHBDD1-211ENST00000473218 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
RHBDD1-211ENST00000473218 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
RHBDD1-211ENST00000473218 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
RHBDD1-211ENST00000473218 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
RHBDD1-211ENST00000473218 WDR97A6NE52 1622 aa11.62□□□□□ -0.55
RHBDD1-211ENST00000473218 GRIN2BQ13224 1484 aa11.62□□□□□ -0.55
RHBDD1-211ENST00000473218 PBRM1Q86U86 1689 aa11.6□□□□□ -0.55
RHBDD1-211ENST00000473218 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
RHBDD1-211ENST00000473218 MAGI1Q96QZ7 1491 aaPredicted RBP11.59□□□□□ -0.55
RHBDD1-211ENST00000473218 SYNJ1O43426 1573 aa11.57□□□□□ -0.56
RHBDD1-211ENST00000473218 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
RHBDD1-211ENST00000473218 ABCA10Q8WWZ4 1543 aa11.56□□□□□ -0.56
RHBDD1-211ENST00000473218 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
RHBDD1-211ENST00000473218 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
RHBDD1-211ENST00000473218 ABCA5Q8WWZ7 1642 aa11.55□□□□□ -0.56
RHBDD1-211ENST00000473218 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
RHBDD1-211ENST00000473218 TOP2BQ02880 1626 aa11.53□□□□□ -0.56
RHBDD1-211ENST00000473218 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
RHBDD1-211ENST00000473218 TRHP20396 242 aaPredicted RBP11.52□□□□□ -0.57
RHBDD1-211ENST00000473218 ADAMTS12P58397 1594 aa11.46□□□□□ -0.57
RHBDD1-211ENST00000473218 GRIN2AQ12879 1464 aa11.46□□□□□ -0.57
RHBDD1-211ENST00000473218 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
RHBDD1-211ENST00000473218 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
RHBDD1-211ENST00000473218 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
RHBDD1-211ENST00000473218 ERCC6L2Q5T890 1561 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms