RNA–Protein interactions for RNA: ENST00000472735.5

GPM6B-207, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-207ENST00000472735 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
GPM6B-207ENST00000472735 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
GPM6B-207ENST00000472735 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
GPM6B-207ENST00000472735 CCDC180Q9P1Z9 1646 aa22.89■■□□□ 1.25
GPM6B-207ENST00000472735 ABCC9O60706 1549 aa22.76■■□□□ 1.23
GPM6B-207ENST00000472735 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
GPM6B-207ENST00000472735 NACADO15069 1562 aa21.64■■□□□ 1.05
GPM6B-207ENST00000472735 DCAF8L2P0C7V8 631 aa21.6■■□□□ 1.05
GPM6B-207ENST00000472735 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
GPM6B-207ENST00000472735 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
GPM6B-207ENST00000472735 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.99
GPM6B-207ENST00000472735 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
GPM6B-207ENST00000472735 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
GPM6B-207ENST00000472735 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
GPM6B-207ENST00000472735 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
GPM6B-207ENST00000472735 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
GPM6B-207ENST00000472735 SCRIBQ14160 1630 aa20.88■□□□□ 0.93
GPM6B-207ENST00000472735 SHROOM4Q9ULL8 1493 aa20.84■□□□□ 0.93
GPM6B-207ENST00000472735 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
GPM6B-207ENST00000472735 CC2D2AQ9P2K1 1620 aa20.54■□□□□ 0.88
GPM6B-207ENST00000472735 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
GPM6B-207ENST00000472735 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
GPM6B-207ENST00000472735 ATAD2BQ9ULI0 1458 aa19.97■□□□□ 0.79
GPM6B-207ENST00000472735 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
GPM6B-207ENST00000472735 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
GPM6B-207ENST00000472735 SMARCA2P51531 1590 aa19.89■□□□□ 0.77
GPM6B-207ENST00000472735 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
GPM6B-207ENST00000472735 MROH2BQ7Z745 1585 aa19.78■□□□□ 0.76
GPM6B-207ENST00000472735 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
GPM6B-207ENST00000472735 BAZ1BQ9UIG0 1483 aaKnown RBP19.76■□□□□ 0.75
GPM6B-207ENST00000472735 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
GPM6B-207ENST00000472735 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
GPM6B-207ENST00000472735 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
GPM6B-207ENST00000472735 NESP48681 1621 aa19.61■□□□□ 0.73
GPM6B-207ENST00000472735 CUX2O14529 1486 aa19.54■□□□□ 0.72
GPM6B-207ENST00000472735 WIZO95785 1651 aa19.52■□□□□ 0.71
GPM6B-207ENST00000472735 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
GPM6B-207ENST00000472735 RSF1Q96T23 1441 aaPredicted RBP19.46■□□□□ 0.71
GPM6B-207ENST00000472735 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
GPM6B-207ENST00000472735 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
GPM6B-207ENST00000472735 DNAJC5Q9H3Z4 198 aa19.34■□□□□ 0.69
GPM6B-207ENST00000472735 THOC2Q8NI27 1593 aaKnown RBP19.34■□□□□ 0.69
GPM6B-207ENST00000472735 TOP2AP11388 1531 aaKnown RBP19.3■□□□□ 0.68
GPM6B-207ENST00000472735 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
GPM6B-207ENST00000472735 CFTRP13569 1480 aa19.22■□□□□ 0.67
GPM6B-207ENST00000472735 MRC2Q9UBG0 1479 aa19.2■□□□□ 0.66
GPM6B-207ENST00000472735 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
GPM6B-207ENST00000472735 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
GPM6B-207ENST00000472735 WDR62O43379 1518 aa19.15■□□□□ 0.66
GPM6B-207ENST00000472735 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
GPM6B-207ENST00000472735 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
GPM6B-207ENST00000472735 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
GPM6B-207ENST00000472735 TOPBP1Q92547 1522 aa18.82■□□□□ 0.6
GPM6B-207ENST00000472735 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
GPM6B-207ENST00000472735 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
GPM6B-207ENST00000472735 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
GPM6B-207ENST00000472735 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
GPM6B-207ENST00000472735 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
GPM6B-207ENST00000472735 OSCARQ8IYS5 282 aa18.71■□□□□ 0.59
GPM6B-207ENST00000472735 POLA1P09884 1462 aaPredicted RBP18.65■□□□□ 0.58
GPM6B-207ENST00000472735 TARBP1Q13395 1621 aaKnown RBP18.62■□□□□ 0.57
GPM6B-207ENST00000472735 AQRO60306 1485 aaKnown RBP eCLIP18.6■□□□□ 0.57
GPM6B-207ENST00000472735 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
GPM6B-207ENST00000472735 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.57
GPM6B-207ENST00000472735 SOGA1O94964 1423 aa18.58■□□□□ 0.57
GPM6B-207ENST00000472735 CUX1P39880 1505 aa18.57■□□□□ 0.56
GPM6B-207ENST00000472735 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
GPM6B-207ENST00000472735 TRIM41Q8WV44 630 aa18.55■□□□□ 0.56
GPM6B-207ENST00000472735 TDRD9Q8NDG6 1382 aaKnown RBP18.53■□□□□ 0.56
GPM6B-207ENST00000472735 FBLN2P98095 1184 aa18.44■□□□□ 0.54
GPM6B-207ENST00000472735 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
GPM6B-207ENST00000472735 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
GPM6B-207ENST00000472735 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
GPM6B-207ENST00000472735 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
GPM6B-207ENST00000472735 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
GPM6B-207ENST00000472735 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
GPM6B-207ENST00000472735 CHD1O14646 1710 aa18.37■□□□□ 0.53
GPM6B-207ENST00000472735 ARHGEF11O15085 1522 aa18.37■□□□□ 0.53
GPM6B-207ENST00000472735 ADRA2BP18089 450 aa18.36■□□□□ 0.53
GPM6B-207ENST00000472735 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
GPM6B-207ENST00000472735 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
GPM6B-207ENST00000472735 GAPVD1Q14C86 1478 aa18.35■□□□□ 0.53
GPM6B-207ENST00000472735 WRNQ14191 1432 aaPredicted RBP eCLIP18.34■□□□□ 0.53
GPM6B-207ENST00000472735 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
GPM6B-207ENST00000472735 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
GPM6B-207ENST00000472735 SYNJ2O15056 1496 aa18.3■□□□□ 0.52
GPM6B-207ENST00000472735 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
GPM6B-207ENST00000472735 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
GPM6B-207ENST00000472735 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
GPM6B-207ENST00000472735 CYB5RLQ6IPT4 315 aa18.25■□□□□ 0.51
GPM6B-207ENST00000472735 CLASP1Q7Z460 1538 aa18.24■□□□□ 0.51
GPM6B-207ENST00000472735 PBRM1Q86U86 1689 aa18.24■□□□□ 0.51
GPM6B-207ENST00000472735 ARAP1Q96P48 1450 aa18.21■□□□□ 0.51
GPM6B-207ENST00000472735 KCNA4P22459 653 aa18.16■□□□□ 0.5
GPM6B-207ENST00000472735 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
GPM6B-207ENST00000472735 GRIN2AQ12879 1464 aa18.14■□□□□ 0.5
GPM6B-207ENST00000472735 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
GPM6B-207ENST00000472735 FHAD1B1AJZ9 1412 aa18.13■□□□□ 0.49
GPM6B-207ENST00000472735 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
GPM6B-207ENST00000472735 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms