RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 NISCHQ9Y2I1 1504 aa45.68■■■■■ 4.9
CHMP2B-204ENST00000472024 CCDC180Q9P1Z9 1646 aa40.23■■■■■ 4.03
CHMP2B-204ENST00000472024 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
CHMP2B-204ENST00000472024 ABCC9O60706 1549 aa38.25■■■■□ 3.71
CHMP2B-204ENST00000472024 DCAF1Q9Y4B6 1507 aa37.97■■■■□ 3.67
CHMP2B-204ENST00000472024 MYO15BQ96JP2 1530 aa37.8■■■■□ 3.64
CHMP2B-204ENST00000472024 NACADO15069 1562 aa37.58■■■■□ 3.61
CHMP2B-204ENST00000472024 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
CHMP2B-204ENST00000472024 RB1CC1Q8TDY2 1594 aa37.33■■■■□ 3.57
CHMP2B-204ENST00000472024 SCRIBQ14160 1630 aa36.63■■■■□ 3.45
CHMP2B-204ENST00000472024 UNC13AQ9UPW8 1703 aa36.47■■■■□ 3.43
CHMP2B-204ENST00000472024 SHROOM4Q9ULL8 1493 aa36.42■■■■□ 3.42
CHMP2B-204ENST00000472024 BICRAQ9NZM4 1560 aa36.22■■■■□ 3.39
CHMP2B-204ENST00000472024 PABPN1Q86U42 306 aaKnown RBP eCLIP35.85■■■■□ 3.33
CHMP2B-204ENST00000472024 CECR2Q9BXF3 1484 aa35.41■■■■□ 3.26
CHMP2B-204ENST00000472024 BAZ1AQ9NRL2 1556 aaPredicted RBP35.33■■■■□ 3.25
CHMP2B-204ENST00000472024 SMARCA4P51532 1647 aa35.22■■■■□ 3.23
CHMP2B-204ENST00000472024 MROH2BQ7Z745 1585 aa35.18■■■■□ 3.22
CHMP2B-204ENST00000472024 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
CHMP2B-204ENST00000472024 EIF4G1Q04637 1599 aaKnown RBP35.14■■■■□ 3.22
CHMP2B-204ENST00000472024 PEG3Q9GZU2 1588 aa34.98■■■■□ 3.19
CHMP2B-204ENST00000472024 WIZO95785 1651 aa34.8■■■■□ 3.16
CHMP2B-204ENST00000472024 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
CHMP2B-204ENST00000472024 ATAD2BQ9ULI0 1458 aa34.8■■■■□ 3.16
CHMP2B-204ENST00000472024 SUPT5HO00267 1087 aaKnown RBP34.74■■■■□ 3.15
CHMP2B-204ENST00000472024 DNAJC5BQ9UF47 199 aa34.73■■■■□ 3.15
CHMP2B-204ENST00000472024 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
CHMP2B-204ENST00000472024 NCAPD3P42695 1498 aa34.68■■■■□ 3.14
CHMP2B-204ENST00000472024 HMGXB3Q12766 1538 aa34.6■■■■□ 3.13
CHMP2B-204ENST00000472024 TOP2AP11388 1531 aaKnown RBP34.58■■■■□ 3.13
CHMP2B-204ENST00000472024 BAZ1BQ9UIG0 1483 aaKnown RBP34.51■■■■□ 3.11
CHMP2B-204ENST00000472024 CCDC88BA6NC98 1476 aa34.13■■■■□ 3.05
CHMP2B-204ENST00000472024 CFTRP13569 1480 aa33.71■■■□□ 2.99
CHMP2B-204ENST00000472024 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
CHMP2B-204ENST00000472024 LAMC3Q9Y6N6 1575 aa33.57■■■□□ 2.96
CHMP2B-204ENST00000472024 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
CHMP2B-204ENST00000472024 NESP48681 1621 aa33.42■■■□□ 2.94
CHMP2B-204ENST00000472024 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
CHMP2B-204ENST00000472024 FANCD2Q9BXW9 1451 aa33.25■■■□□ 2.91
CHMP2B-204ENST00000472024 CHIC1Q5VXU3 224 aa33.14■■■□□ 2.9
CHMP2B-204ENST00000472024 ABCC8Q09428 1581 aa33.1■■■□□ 2.89
CHMP2B-204ENST00000472024 CEP164Q9UPV0 1460 aa33.1■■■□□ 2.89
CHMP2B-204ENST00000472024 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.89
CHMP2B-204ENST00000472024 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
CHMP2B-204ENST00000472024 CUX1P39880 1505 aa32.96■■■□□ 2.87
CHMP2B-204ENST00000472024 SYNJ1O43426 1573 aa32.96■■■□□ 2.87
CHMP2B-204ENST00000472024 TOP2BQ02880 1626 aa32.95■■■□□ 2.87
CHMP2B-204ENST00000472024 BIVM-ERCC5R4GMW8 1640 aa32.95■■■□□ 2.87
CHMP2B-204ENST00000472024 DNMBPQ6XZF7 1577 aa32.91■■■□□ 2.86
CHMP2B-204ENST00000472024 MRC2Q9UBG0 1479 aa32.88■■■□□ 2.85
CHMP2B-204ENST00000472024 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
CHMP2B-204ENST00000472024 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
CHMP2B-204ENST00000472024 TRIM41Q8WV44 630 aa32.85■■■□□ 2.85
CHMP2B-204ENST00000472024 TOPBP1Q92547 1522 aa32.84■■■□□ 2.85
CHMP2B-204ENST00000472024 THOC2Q8NI27 1593 aaKnown RBP32.8■■■□□ 2.84
CHMP2B-204ENST00000472024 WDR62O43379 1518 aa32.79■■■□□ 2.84
CHMP2B-204ENST00000472024 FGD5Q6ZNL6 1462 aa32.67■■■□□ 2.82
CHMP2B-204ENST00000472024 POLA1P09884 1462 aaPredicted RBP32.64■■■□□ 2.82
CHMP2B-204ENST00000472024 CUX2O14529 1486 aa32.49■■■□□ 2.79
CHMP2B-204ENST00000472024 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
CHMP2B-204ENST00000472024 SOGA1O94964 1423 aa32.46■■■□□ 2.79
CHMP2B-204ENST00000472024 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
CHMP2B-204ENST00000472024 WDR97A6NE52 1622 aa32.42■■■□□ 2.78
CHMP2B-204ENST00000472024 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
CHMP2B-204ENST00000472024 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
CHMP2B-204ENST00000472024 EEA1Q15075 1411 aa32.41■■■□□ 2.78
CHMP2B-204ENST00000472024 DNAJC5Q9H3Z4 198 aa32.39■■■□□ 2.78
CHMP2B-204ENST00000472024 KIF27Q86VH2 1401 aa32.32■■■□□ 2.76
CHMP2B-204ENST00000472024 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
CHMP2B-204ENST00000472024 ABCA5Q8WWZ7 1642 aa32.25■■■□□ 2.75
CHMP2B-204ENST00000472024 GAPVD1Q14C86 1478 aa32.13■■■□□ 2.73
CHMP2B-204ENST00000472024 ZNF608Q9ULD9 1512 aaPredicted RBP32.13■■■□□ 2.73
CHMP2B-204ENST00000472024 TDRD9Q8NDG6 1382 aaKnown RBP32.12■■■□□ 2.73
CHMP2B-204ENST00000472024 CSRNP3Q8WYN3 585 aa32.11■■■□□ 2.73
CHMP2B-204ENST00000472024 ERICH3Q5RHP9 1530 aa32.1■■■□□ 2.73
CHMP2B-204ENST00000472024 IGF1RP08069 1367 aa32.09■■■□□ 2.73
CHMP2B-204ENST00000472024 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
CHMP2B-204ENST00000472024 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.72
CHMP2B-204ENST00000472024 FAM9AQ8IZU1 332 aaPredicted RBP32.02■■■□□ 2.72
CHMP2B-204ENST00000472024 GRIN2BQ13224 1484 aa32.02■■■□□ 2.72
CHMP2B-204ENST00000472024 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
CHMP2B-204ENST00000472024 PBRM1Q86U86 1689 aa31.99■■■□□ 2.71
CHMP2B-204ENST00000472024 KIF21BO75037 1637 aa31.98■■■□□ 2.71
CHMP2B-204ENST00000472024 CUL7Q14999 1698 aa31.96■■■□□ 2.71
CHMP2B-204ENST00000472024 CARMIL1Q5VZK9 1371 aa31.88■■■□□ 2.69
CHMP2B-204ENST00000472024 MAGI1Q96QZ7 1491 aaPredicted RBP31.86■■■□□ 2.69
CHMP2B-204ENST00000472024 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
CHMP2B-204ENST00000472024 GOLGA3Q08378 1498 aa31.83■■■□□ 2.69
CHMP2B-204ENST00000472024 FHAD1B1AJZ9 1412 aa31.83■■■□□ 2.69
CHMP2B-204ENST00000472024 RAPGEF2Q9Y4G8 1499 aa31.82■■■□□ 2.68
CHMP2B-204ENST00000472024 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
CHMP2B-204ENST00000472024 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
CHMP2B-204ENST00000472024 LOC105371045A0A1W2PR82 267 aa31.67■■■□□ 2.66
CHMP2B-204ENST00000472024 TNIKQ9UKE5 1360 aa31.64■■■□□ 2.66
CHMP2B-204ENST00000472024 GRIN2AQ12879 1464 aa31.6■■■□□ 2.65
CHMP2B-204ENST00000472024 NUP160Q12769 1436 aa31.49■■■□□ 2.63
CHMP2B-204ENST00000472024 UBTFP17480 764 aaKnown RBP31.48■■■□□ 2.63
CHMP2B-204ENST00000472024 CHMP7Q8WUX9 453 aaPredicted RBP31.48■■■□□ 2.63
CHMP2B-204ENST00000472024 CTTNBP2Q8WZ74 1663 aa31.44■■■□□ 2.62
CHMP2B-204ENST00000472024 CHD1O14646 1710 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms