RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
ARPC1A-204ENST00000471960 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
ARPC1A-204ENST00000471960 ABCC9O60706 1549 aa30.34■■■□□ 2.45
ARPC1A-204ENST00000471960 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
ARPC1A-204ENST00000471960 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
ARPC1A-204ENST00000471960 NACADO15069 1562 aa28.84■■■□□ 2.21
ARPC1A-204ENST00000471960 ZCCHC6Q5VYS8 1495 aaKnown RBP28.57■■■□□ 2.16
ARPC1A-204ENST00000471960 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
ARPC1A-204ENST00000471960 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
ARPC1A-204ENST00000471960 DCAF1Q9Y4B6 1507 aa28.34■■■□□ 2.13
ARPC1A-204ENST00000471960 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
ARPC1A-204ENST00000471960 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
ARPC1A-204ENST00000471960 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
ARPC1A-204ENST00000471960 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
ARPC1A-204ENST00000471960 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
ARPC1A-204ENST00000471960 EIF4G1Q04637 1599 aaKnown RBP27.42■■□□□ 1.98
ARPC1A-204ENST00000471960 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
ARPC1A-204ENST00000471960 CECR2Q9BXF3 1484 aa27.25■■□□□ 1.95
ARPC1A-204ENST00000471960 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
ARPC1A-204ENST00000471960 ATAD2BQ9ULI0 1458 aa26.66■■□□□ 1.86
ARPC1A-204ENST00000471960 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
ARPC1A-204ENST00000471960 BAZ1AQ9NRL2 1556 aaPredicted RBP26.6■■□□□ 1.85
ARPC1A-204ENST00000471960 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
ARPC1A-204ENST00000471960 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
ARPC1A-204ENST00000471960 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
ARPC1A-204ENST00000471960 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
ARPC1A-204ENST00000471960 PEG3Q9GZU2 1588 aa26.44■■□□□ 1.82
ARPC1A-204ENST00000471960 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
ARPC1A-204ENST00000471960 WIZO95785 1651 aa26.26■■□□□ 1.79
ARPC1A-204ENST00000471960 NESP48681 1621 aa26.22■■□□□ 1.79
ARPC1A-204ENST00000471960 RSF1Q96T23 1441 aaPredicted RBP26.11■■□□□ 1.77
ARPC1A-204ENST00000471960 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
ARPC1A-204ENST00000471960 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
ARPC1A-204ENST00000471960 CUX2O14529 1486 aa25.9■■□□□ 1.74
ARPC1A-204ENST00000471960 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
ARPC1A-204ENST00000471960 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
ARPC1A-204ENST00000471960 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
ARPC1A-204ENST00000471960 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
ARPC1A-204ENST00000471960 DNAJC5Q9H3Z4 198 aa25.79■■□□□ 1.72
ARPC1A-204ENST00000471960 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
ARPC1A-204ENST00000471960 CFTRP13569 1480 aa25.66■■□□□ 1.7
ARPC1A-204ENST00000471960 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
ARPC1A-204ENST00000471960 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
ARPC1A-204ENST00000471960 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
ARPC1A-204ENST00000471960 CEP164Q9UPV0 1460 aa25.54■■□□□ 1.68
ARPC1A-204ENST00000471960 WDR62O43379 1518 aa25.52■■□□□ 1.68
ARPC1A-204ENST00000471960 PRDM2Q13029 1718 aa25.44■■□□□ 1.66
ARPC1A-204ENST00000471960 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
ARPC1A-204ENST00000471960 SUPT5HO00267 1087 aaKnown RBP25.28■■□□□ 1.64
ARPC1A-204ENST00000471960 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
ARPC1A-204ENST00000471960 CHIC1Q5VXU3 224 aa25.1■■□□□ 1.61
ARPC1A-204ENST00000471960 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
ARPC1A-204ENST00000471960 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
ARPC1A-204ENST00000471960 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
ARPC1A-204ENST00000471960 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
ARPC1A-204ENST00000471960 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
ARPC1A-204ENST00000471960 TARBP1Q13395 1621 aaKnown RBP24.93■■□□□ 1.58
ARPC1A-204ENST00000471960 CUX1P39880 1505 aa24.91■■□□□ 1.58
ARPC1A-204ENST00000471960 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.57
ARPC1A-204ENST00000471960 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
ARPC1A-204ENST00000471960 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.576e-6■□□□□ 8.5
ARPC1A-204ENST00000471960 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
ARPC1A-204ENST00000471960 SOGA1O94964 1423 aa24.8■■□□□ 1.56
ARPC1A-204ENST00000471960 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
ARPC1A-204ENST00000471960 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
ARPC1A-204ENST00000471960 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
ARPC1A-204ENST00000471960 CHD1O14646 1710 aa24.65■■□□□ 1.54
ARPC1A-204ENST00000471960 SYNJ1O43426 1573 aa24.62■■□□□ 1.53
ARPC1A-204ENST00000471960 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
ARPC1A-204ENST00000471960 WRNQ14191 1432 aaPredicted RBP eCLIP24.58■■□□□ 1.53
ARPC1A-204ENST00000471960 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
ARPC1A-204ENST00000471960 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
ARPC1A-204ENST00000471960 FBLN2P98095 1184 aa24.56■■□□□ 1.52
ARPC1A-204ENST00000471960 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
ARPC1A-204ENST00000471960 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
ARPC1A-204ENST00000471960 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
ARPC1A-204ENST00000471960 ABCA5Q8WWZ7 1642 aa24.51■■□□□ 1.51
ARPC1A-204ENST00000471960 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
ARPC1A-204ENST00000471960 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
ARPC1A-204ENST00000471960 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
ARPC1A-204ENST00000471960 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
ARPC1A-204ENST00000471960 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
ARPC1A-204ENST00000471960 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
ARPC1A-204ENST00000471960 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
ARPC1A-204ENST00000471960 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
ARPC1A-204ENST00000471960 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
ARPC1A-204ENST00000471960 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
ARPC1A-204ENST00000471960 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
ARPC1A-204ENST00000471960 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
ARPC1A-204ENST00000471960 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
ARPC1A-204ENST00000471960 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
ARPC1A-204ENST00000471960 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
ARPC1A-204ENST00000471960 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
ARPC1A-204ENST00000471960 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
ARPC1A-204ENST00000471960 NUP160Q12769 1436 aa24.13■■□□□ 1.45
ARPC1A-204ENST00000471960 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
ARPC1A-204ENST00000471960 IGF1RP08069 1367 aa24.06■■□□□ 1.44
ARPC1A-204ENST00000471960 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
ARPC1A-204ENST00000471960 SHROOM2Q13796 1616 aa24■■□□□ 1.43
ARPC1A-204ENST00000471960 CUL7Q14999 1698 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms