RNA–Protein interactions for RNA: ENST00000471729.1

CCDC136-207, Transcript of coiled-coil domain containing 136, humanhuman

TSL 3

Gene CCDC136, Length 495 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-207ENST00000471729 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.46
CCDC136-207ENST00000471729 ABCC9O60706 1549 aa22.27■■□□□ 1.16
CCDC136-207ENST00000471729 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
CCDC136-207ENST00000471729 DNAJC5BQ9UF47 199 aa21.42■■□□□ 1.02
CCDC136-207ENST00000471729 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
CCDC136-207ENST00000471729 NACADO15069 1562 aa20.72■□□□□ 0.91
CCDC136-207ENST00000471729 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC136-207ENST00000471729 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
CCDC136-207ENST00000471729 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
CCDC136-207ENST00000471729 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
CCDC136-207ENST00000471729 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
CCDC136-207ENST00000471729 MYO15BQ96JP2 1530 aa20.34■□□□□ 0.85
CCDC136-207ENST00000471729 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
CCDC136-207ENST00000471729 CC2D2AQ9P2K1 1620 aa20.09■□□□□ 0.81
CCDC136-207ENST00000471729 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
CCDC136-207ENST00000471729 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
CCDC136-207ENST00000471729 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
CCDC136-207ENST00000471729 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
CCDC136-207ENST00000471729 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
CCDC136-207ENST00000471729 DNAJC5Q9H3Z4 198 aa19.86■□□□□ 0.77
CCDC136-207ENST00000471729 CUX2O14529 1486 aa19.31■□□□□ 0.68
CCDC136-207ENST00000471729 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
CCDC136-207ENST00000471729 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
CCDC136-207ENST00000471729 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
CCDC136-207ENST00000471729 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
CCDC136-207ENST00000471729 NESP48681 1621 aa19.07■□□□□ 0.64
CCDC136-207ENST00000471729 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
CCDC136-207ENST00000471729 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
CCDC136-207ENST00000471729 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
CCDC136-207ENST00000471729 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
CCDC136-207ENST00000471729 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
CCDC136-207ENST00000471729 PEG3Q9GZU2 1588 aa18.77■□□□□ 0.6
CCDC136-207ENST00000471729 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
CCDC136-207ENST00000471729 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
CCDC136-207ENST00000471729 KIF21AQ7Z4S6 1674 aa18.74■□□□□ 0.59
CCDC136-207ENST00000471729 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
CCDC136-207ENST00000471729 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
CCDC136-207ENST00000471729 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
CCDC136-207ENST00000471729 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
CCDC136-207ENST00000471729 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
CCDC136-207ENST00000471729 WDR62O43379 1518 aa18.54■□□□□ 0.56
CCDC136-207ENST00000471729 WIZO95785 1651 aa18.4■□□□□ 0.54
CCDC136-207ENST00000471729 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
CCDC136-207ENST00000471729 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
CCDC136-207ENST00000471729 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
CCDC136-207ENST00000471729 CFTRP13569 1480 aa18.3■□□□□ 0.52
CCDC136-207ENST00000471729 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
CCDC136-207ENST00000471729 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
CCDC136-207ENST00000471729 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
CCDC136-207ENST00000471729 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
CCDC136-207ENST00000471729 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
CCDC136-207ENST00000471729 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
CCDC136-207ENST00000471729 ARHGEF11O15085 1522 aa18.11■□□□□ 0.49
CCDC136-207ENST00000471729 TOP2AP11388 1531 aaKnown RBP18.09■□□□□ 0.49
CCDC136-207ENST00000471729 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
CCDC136-207ENST00000471729 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
CCDC136-207ENST00000471729 PRDM2Q13029 1718 aa17.98■□□□□ 0.47
CCDC136-207ENST00000471729 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
CCDC136-207ENST00000471729 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
CCDC136-207ENST00000471729 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
CCDC136-207ENST00000471729 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
CCDC136-207ENST00000471729 AQRO60306 1485 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC136-207ENST00000471729 CHD1O14646 1710 aa17.87■□□□□ 0.45
CCDC136-207ENST00000471729 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
CCDC136-207ENST00000471729 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
CCDC136-207ENST00000471729 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
CCDC136-207ENST00000471729 ABCC8Q09428 1581 aa17.83■□□□□ 0.44
CCDC136-207ENST00000471729 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
CCDC136-207ENST00000471729 FBLN2P98095 1184 aa17.78■□□□□ 0.44
CCDC136-207ENST00000471729 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
CCDC136-207ENST00000471729 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
CCDC136-207ENST00000471729 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
CCDC136-207ENST00000471729 SOGA1O94964 1423 aa17.67■□□□□ 0.42
CCDC136-207ENST00000471729 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
CCDC136-207ENST00000471729 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
CCDC136-207ENST00000471729 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
CCDC136-207ENST00000471729 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
CCDC136-207ENST00000471729 MAGI1Q96QZ7 1491 aaPredicted RBP17.56■□□□□ 0.4
CCDC136-207ENST00000471729 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
CCDC136-207ENST00000471729 CUX1P39880 1505 aa17.55■□□□□ 0.4
CCDC136-207ENST00000471729 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
CCDC136-207ENST00000471729 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
CCDC136-207ENST00000471729 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
CCDC136-207ENST00000471729 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
CCDC136-207ENST00000471729 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
CCDC136-207ENST00000471729 SENP3Q9H4L4 574 aaPredicted RBP17.39■□□□□ 0.37
CCDC136-207ENST00000471729 ABCA5Q8WWZ7 1642 aa17.38■□□□□ 0.37
CCDC136-207ENST00000471729 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
CCDC136-207ENST00000471729 GRIN2AQ12879 1464 aa17.33■□□□□ 0.37
CCDC136-207ENST00000471729 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
CCDC136-207ENST00000471729 NUP160Q12769 1436 aa17.32■□□□□ 0.36
CCDC136-207ENST00000471729 SHROOM2Q13796 1616 aa17.28■□□□□ 0.36
CCDC136-207ENST00000471729 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
CCDC136-207ENST00000471729 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
CCDC136-207ENST00000471729 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
CCDC136-207ENST00000471729 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
CCDC136-207ENST00000471729 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
CCDC136-207ENST00000471729 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
CCDC136-207ENST00000471729 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
CCDC136-207ENST00000471729 KDM4FA0A1W2PPD8 638 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms