RNA–Protein interactions for RNA: ENST00000471219.1

PEF1-203, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 3

Gene PEF1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-203ENST00000471219 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
PEF1-203ENST00000471219 ABCC9O60706 1549 aa20.17■□□□□ 0.82
PEF1-203ENST00000471219 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
PEF1-203ENST00000471219 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
PEF1-203ENST00000471219 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
PEF1-203ENST00000471219 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
PEF1-203ENST00000471219 NACADO15069 1562 aa18.65■□□□□ 0.58
PEF1-203ENST00000471219 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
PEF1-203ENST00000471219 BICRAQ9NZM4 1560 aa18.45■□□□□ 0.54
PEF1-203ENST00000471219 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
PEF1-203ENST00000471219 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
PEF1-203ENST00000471219 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
PEF1-203ENST00000471219 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
PEF1-203ENST00000471219 CC2D2AQ9P2K1 1620 aa18.22■□□□□ 0.51
PEF1-203ENST00000471219 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
PEF1-203ENST00000471219 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
PEF1-203ENST00000471219 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
PEF1-203ENST00000471219 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
PEF1-203ENST00000471219 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
PEF1-203ENST00000471219 CUX2O14529 1486 aa17.53■□□□□ 0.4
PEF1-203ENST00000471219 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
PEF1-203ENST00000471219 NESP48681 1621 aa17.19■□□□□ 0.34
PEF1-203ENST00000471219 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
PEF1-203ENST00000471219 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
PEF1-203ENST00000471219 TRIM41Q8WV44 630 aa17.14■□□□□ 0.33
PEF1-203ENST00000471219 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
PEF1-203ENST00000471219 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
PEF1-203ENST00000471219 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
PEF1-203ENST00000471219 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
PEF1-203ENST00000471219 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
PEF1-203ENST00000471219 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
PEF1-203ENST00000471219 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
PEF1-203ENST00000471219 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
PEF1-203ENST00000471219 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
PEF1-203ENST00000471219 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
PEF1-203ENST00000471219 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
PEF1-203ENST00000471219 MRC2Q9UBG0 1479 aa16.75■□□□□ 0.27
PEF1-203ENST00000471219 WDR62O43379 1518 aa16.75■□□□□ 0.27
PEF1-203ENST00000471219 WIZO95785 1651 aa16.71■□□□□ 0.27
PEF1-203ENST00000471219 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
PEF1-203ENST00000471219 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
PEF1-203ENST00000471219 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
PEF1-203ENST00000471219 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
PEF1-203ENST00000471219 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
PEF1-203ENST00000471219 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PEF1-203ENST00000471219 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
PEF1-203ENST00000471219 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
PEF1-203ENST00000471219 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
PEF1-203ENST00000471219 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
PEF1-203ENST00000471219 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
PEF1-203ENST00000471219 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
PEF1-203ENST00000471219 CFTRP13569 1480 aa16.35■□□□□ 0.21
PEF1-203ENST00000471219 CCDC88BA6NC98 1476 aa16.32■□□□□ 0.2
PEF1-203ENST00000471219 CHD1O14646 1710 aa16.32■□□□□ 0.2
PEF1-203ENST00000471219 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
PEF1-203ENST00000471219 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
PEF1-203ENST00000471219 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
PEF1-203ENST00000471219 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
PEF1-203ENST00000471219 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
PEF1-203ENST00000471219 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
PEF1-203ENST00000471219 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
PEF1-203ENST00000471219 TOPBP1Q92547 1522 aa16.14■□□□□ 0.18
PEF1-203ENST00000471219 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
PEF1-203ENST00000471219 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
PEF1-203ENST00000471219 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
PEF1-203ENST00000471219 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
PEF1-203ENST00000471219 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
PEF1-203ENST00000471219 FBLN2P98095 1184 aa16.05■□□□□ 0.16
PEF1-203ENST00000471219 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
PEF1-203ENST00000471219 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
PEF1-203ENST00000471219 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
PEF1-203ENST00000471219 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
PEF1-203ENST00000471219 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
PEF1-203ENST00000471219 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
PEF1-203ENST00000471219 CUX1P39880 1505 aa15.85■□□□□ 0.13
PEF1-203ENST00000471219 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
PEF1-203ENST00000471219 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
PEF1-203ENST00000471219 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
PEF1-203ENST00000471219 MAGI1Q96QZ7 1491 aaPredicted RBP15.82■□□□□ 0.12
PEF1-203ENST00000471219 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
PEF1-203ENST00000471219 SOGA1O94964 1423 aa15.8■□□□□ 0.12
PEF1-203ENST00000471219 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
PEF1-203ENST00000471219 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
PEF1-203ENST00000471219 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
PEF1-203ENST00000471219 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
PEF1-203ENST00000471219 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
PEF1-203ENST00000471219 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
PEF1-203ENST00000471219 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
PEF1-203ENST00000471219 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
PEF1-203ENST00000471219 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
PEF1-203ENST00000471219 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
PEF1-203ENST00000471219 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
PEF1-203ENST00000471219 SHROOM2Q13796 1616 aa15.59■□□□□ 0.09
PEF1-203ENST00000471219 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
PEF1-203ENST00000471219 ADAMTS12P58397 1594 aa15.58■□□□□ 0.09
PEF1-203ENST00000471219 ILDR1Q86SU0 546 aaPredicted RBP15.55■□□□□ 0.08
PEF1-203ENST00000471219 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
PEF1-203ENST00000471219 TSPOAP1O95153 1857 aa15.52■□□□□ 0.08
PEF1-203ENST00000471219 KDM6BO15054 1643 aa15.51■□□□□ 0.07
PEF1-203ENST00000471219 NUP160Q12769 1436 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms