RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
CNOT3-206ENST00000471126 ABCC9O60706 1549 aa35.45■■■■□ 3.27
CNOT3-206ENST00000471126 DNAJC5BQ9UF47 199 aa34.37■■■■□ 3.09
CNOT3-206ENST00000471126 CCDC180Q9P1Z9 1646 aa34.13■■■■□ 3.05
CNOT3-206ENST00000471126 RB1CC1Q8TDY2 1594 aa33.13■■■□□ 2.89
CNOT3-206ENST00000471126 PABPN1Q86U42 306 aaKnown RBP eCLIP32.95■■■□□ 2.87
CNOT3-206ENST00000471126 NACADO15069 1562 aa32.64■■■□□ 2.82
CNOT3-206ENST00000471126 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
CNOT3-206ENST00000471126 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
CNOT3-206ENST00000471126 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
CNOT3-206ENST00000471126 BICRAQ9NZM4 1560 aa32.23■■■□□ 2.75
CNOT3-206ENST00000471126 CECR2Q9BXF3 1484 aa32.03■■■□□ 2.72
CNOT3-206ENST00000471126 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
CNOT3-206ENST00000471126 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
CNOT3-206ENST00000471126 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
CNOT3-206ENST00000471126 EIF4G1Q04637 1599 aaKnown RBP31.53■■■□□ 2.64
CNOT3-206ENST00000471126 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
CNOT3-206ENST00000471126 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
CNOT3-206ENST00000471126 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
CNOT3-206ENST00000471126 CUX2O14529 1486 aa30.93■■■□□ 2.54
CNOT3-206ENST00000471126 ERCC6Q03468 1493 aa30.66■■■□□ 2.5
CNOT3-206ENST00000471126 TRIM41Q8WV44 630 aa30.48■■■□□ 2.47
CNOT3-206ENST00000471126 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
CNOT3-206ENST00000471126 NESP48681 1621 aa30.14■■■□□ 2.41
CNOT3-206ENST00000471126 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
CNOT3-206ENST00000471126 THOC2Q8NI27 1593 aaKnown RBP29.91■■■□□ 2.38
CNOT3-206ENST00000471126 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
CNOT3-206ENST00000471126 SMARCA2P51531 1590 aa29.76■■■□□ 2.35
CNOT3-206ENST00000471126 LAMC3Q9Y6N6 1575 aa29.63■■■□□ 2.33
CNOT3-206ENST00000471126 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
CNOT3-206ENST00000471126 PDS5BQ9NTI5 1447 aa29.6■■■□□ 2.33
CNOT3-206ENST00000471126 SMARCA4P51532 1647 aa29.58■■■□□ 2.33
CNOT3-206ENST00000471126 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
CNOT3-206ENST00000471126 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
CNOT3-206ENST00000471126 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
CNOT3-206ENST00000471126 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
CNOT3-206ENST00000471126 CADPSQ9ULU8 1353 aa29.3■■■□□ 2.28
CNOT3-206ENST00000471126 PEG3Q9GZU2 1588 aa29.29■■■□□ 2.28
CNOT3-206ENST00000471126 WDR62O43379 1518 aa29.29■■■□□ 2.28
CNOT3-206ENST00000471126 MROH2BQ7Z745 1585 aa29.07■■■□□ 2.24
CNOT3-206ENST00000471126 RIMBP3CA6NJZ7 1639 aa29.05■■■□□ 2.24
CNOT3-206ENST00000471126 RIMBP3BA6NNM3 1639 aa29.05■■■□□ 2.24
CNOT3-206ENST00000471126 RIMBP3Q9UFD9 1639 aa29.05■■■□□ 2.24
CNOT3-206ENST00000471126 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
CNOT3-206ENST00000471126 TRHP20396 242 aaPredicted RBP28.94■■■□□ 2.22
CNOT3-206ENST00000471126 FANCD2Q9BXW9 1451 aa28.93■■■□□ 2.22
CNOT3-206ENST00000471126 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
CNOT3-206ENST00000471126 AEBP2Q6ZN18 517 aaPredicted RBP28.89■■■□□ 2.22
CNOT3-206ENST00000471126 ARHGEF11O15085 1522 aa28.89■■■□□ 2.21
CNOT3-206ENST00000471126 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
CNOT3-206ENST00000471126 CFTRP13569 1480 aa28.69■■■□□ 2.18
CNOT3-206ENST00000471126 ZNF608Q9ULD9 1512 aaPredicted RBP28.62■■■□□ 2.17
CNOT3-206ENST00000471126 WIZO95785 1651 aa28.6■■■□□ 2.17
CNOT3-206ENST00000471126 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
CNOT3-206ENST00000471126 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
CNOT3-206ENST00000471126 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
CNOT3-206ENST00000471126 FBLN2P98095 1184 aa28.37■■■□□ 2.13
CNOT3-206ENST00000471126 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
CNOT3-206ENST00000471126 AQRO60306 1485 aaKnown RBP eCLIP28.26■■■□□ 2.112e-10■■■■■ 40.6
CNOT3-206ENST00000471126 TOPBP1Q92547 1522 aa28.24■■■□□ 2.11
CNOT3-206ENST00000471126 CHD1O14646 1710 aa28.21■■■□□ 2.11
CNOT3-206ENST00000471126 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
CNOT3-206ENST00000471126 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
CNOT3-206ENST00000471126 PRDM2Q13029 1718 aa28.02■■■□□ 2.08
CNOT3-206ENST00000471126 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
CNOT3-206ENST00000471126 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
CNOT3-206ENST00000471126 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
CNOT3-206ENST00000471126 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
CNOT3-206ENST00000471126 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.06
CNOT3-206ENST00000471126 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
CNOT3-206ENST00000471126 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.05
CNOT3-206ENST00000471126 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
CNOT3-206ENST00000471126 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
CNOT3-206ENST00000471126 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
CNOT3-206ENST00000471126 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
CNOT3-206ENST00000471126 SOGA1O94964 1423 aa27.81■■■□□ 2.04
CNOT3-206ENST00000471126 ILDR1Q86SU0 546 aaPredicted RBP27.8■■■□□ 2.04
CNOT3-206ENST00000471126 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.03
CNOT3-206ENST00000471126 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
CNOT3-206ENST00000471126 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
CNOT3-206ENST00000471126 WDR97A6NE52 1622 aa27.57■■■□□ 2
CNOT3-206ENST00000471126 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
CNOT3-206ENST00000471126 KDM4FA0A1W2PPD8 638 aa27.5■■□□□ 1.99
CNOT3-206ENST00000471126 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
CNOT3-206ENST00000471126 SUPT5HO00267 1087 aaKnown RBP27.47■■□□□ 1.99
CNOT3-206ENST00000471126 FAM69CQ0P6D2 419 aa27.35■■□□□ 1.97
CNOT3-206ENST00000471126 CUX1P39880 1505 aa27.35■■□□□ 1.97
CNOT3-206ENST00000471126 KIF13AQ9H1H9 1805 aa27.33■■□□□ 1.97
CNOT3-206ENST00000471126 CEP170Q5SW79 1584 aa27.31■■□□□ 1.96
CNOT3-206ENST00000471126 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
CNOT3-206ENST00000471126 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
CNOT3-206ENST00000471126 NUP160Q12769 1436 aa27.23■■□□□ 1.95
CNOT3-206ENST00000471126 ABCC10Q5T3U5 1492 aa27.21■■□□□ 1.95
CNOT3-206ENST00000471126 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
CNOT3-206ENST00000471126 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
CNOT3-206ENST00000471126 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
CNOT3-206ENST00000471126 SHROOM2Q13796 1616 aa27.12■■□□□ 1.93
CNOT3-206ENST00000471126 PRG4Q92954 1404 aaPredicted RBP27.11■■□□□ 1.93
CNOT3-206ENST00000471126 KDM6BO15054 1643 aa27.09■■□□□ 1.93
CNOT3-206ENST00000471126 JPH4Q96JJ6 628 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms