RNA–Protein interactions for RNA: ENST00000471053.5

ZNF561-213, Transcript of zinc finger protein 561, humanhuman

TSL 4

Gene ZNF561, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-213ENST00000471053 NISCHQ9Y2I1 1504 aa22.27■■□□□ 1.16
ZNF561-213ENST00000471053 ABCC9O60706 1549 aa20.34■□□□□ 0.85
ZNF561-213ENST00000471053 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
ZNF561-213ENST00000471053 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
ZNF561-213ENST00000471053 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
ZNF561-213ENST00000471053 NACADO15069 1562 aa19.02■□□□□ 0.64
ZNF561-213ENST00000471053 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
ZNF561-213ENST00000471053 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
ZNF561-213ENST00000471053 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
ZNF561-213ENST00000471053 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
ZNF561-213ENST00000471053 UNC13AQ9UPW8 1703 aa18.7■□□□□ 0.58
ZNF561-213ENST00000471053 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
ZNF561-213ENST00000471053 SHROOM4Q9ULL8 1493 aa18.38■□□□□ 0.53
ZNF561-213ENST00000471053 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
ZNF561-213ENST00000471053 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
ZNF561-213ENST00000471053 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
ZNF561-213ENST00000471053 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
ZNF561-213ENST00000471053 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
ZNF561-213ENST00000471053 SCRIBQ14160 1630 aa18.15■□□□□ 0.5
ZNF561-213ENST00000471053 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
ZNF561-213ENST00000471053 CUX2O14529 1486 aa17.64■□□□□ 0.41
ZNF561-213ENST00000471053 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
ZNF561-213ENST00000471053 ERCC6Q03468 1493 aa17.47■□□□□ 0.39
ZNF561-213ENST00000471053 NESP48681 1621 aa17.43■□□□□ 0.38
ZNF561-213ENST00000471053 HMGXB3Q12766 1538 aa17.39■□□□□ 0.37
ZNF561-213ENST00000471053 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
ZNF561-213ENST00000471053 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
ZNF561-213ENST00000471053 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
ZNF561-213ENST00000471053 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
ZNF561-213ENST00000471053 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
ZNF561-213ENST00000471053 BAZ1AQ9NRL2 1556 aaPredicted RBP17.22■□□□□ 0.35
ZNF561-213ENST00000471053 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
ZNF561-213ENST00000471053 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
ZNF561-213ENST00000471053 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
ZNF561-213ENST00000471053 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
ZNF561-213ENST00000471053 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
ZNF561-213ENST00000471053 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
ZNF561-213ENST00000471053 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
ZNF561-213ENST00000471053 WDR62O43379 1518 aa16.96■□□□□ 0.31
ZNF561-213ENST00000471053 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
ZNF561-213ENST00000471053 WIZO95785 1651 aa16.86■□□□□ 0.29
ZNF561-213ENST00000471053 CFTRP13569 1480 aa16.85■□□□□ 0.29
ZNF561-213ENST00000471053 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
ZNF561-213ENST00000471053 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
ZNF561-213ENST00000471053 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
ZNF561-213ENST00000471053 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
ZNF561-213ENST00000471053 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
ZNF561-213ENST00000471053 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
ZNF561-213ENST00000471053 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
ZNF561-213ENST00000471053 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
ZNF561-213ENST00000471053 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
ZNF561-213ENST00000471053 CCDC88BA6NC98 1476 aa16.55■□□□□ 0.24
ZNF561-213ENST00000471053 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
ZNF561-213ENST00000471053 ARHGEF11O15085 1522 aa16.51■□□□□ 0.23
ZNF561-213ENST00000471053 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
ZNF561-213ENST00000471053 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
ZNF561-213ENST00000471053 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
ZNF561-213ENST00000471053 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■■■ 28
ZNF561-213ENST00000471053 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
ZNF561-213ENST00000471053 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
ZNF561-213ENST00000471053 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
ZNF561-213ENST00000471053 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
ZNF561-213ENST00000471053 EIF4G3O43432 1585 aaKnown RBP16.35■□□□□ 0.21
ZNF561-213ENST00000471053 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
ZNF561-213ENST00000471053 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
ZNF561-213ENST00000471053 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
ZNF561-213ENST00000471053 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
ZNF561-213ENST00000471053 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
ZNF561-213ENST00000471053 FBLN2P98095 1184 aa16.29■□□□□ 0.2
ZNF561-213ENST00000471053 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
ZNF561-213ENST00000471053 SOGA1O94964 1423 aa16.27■□□□□ 0.19
ZNF561-213ENST00000471053 CHD1O14646 1710 aa16.25■□□□□ 0.19
ZNF561-213ENST00000471053 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
ZNF561-213ENST00000471053 CHMP7Q8WUX9 453 aaPredicted RBP16.17■□□□□ 0.18
ZNF561-213ENST00000471053 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
ZNF561-213ENST00000471053 FGD5Q6ZNL6 1462 aa16.14■□□□□ 0.17
ZNF561-213ENST00000471053 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
ZNF561-213ENST00000471053 CUX1P39880 1505 aa16.11■□□□□ 0.17
ZNF561-213ENST00000471053 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
ZNF561-213ENST00000471053 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
ZNF561-213ENST00000471053 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
ZNF561-213ENST00000471053 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
ZNF561-213ENST00000471053 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
ZNF561-213ENST00000471053 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
ZNF561-213ENST00000471053 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
ZNF561-213ENST00000471053 NUP160Q12769 1436 aa15.92■□□□□ 0.14
ZNF561-213ENST00000471053 ABCA5Q8WWZ7 1642 aa15.91■□□□□ 0.14
ZNF561-213ENST00000471053 GRIN2AQ12879 1464 aa15.89■□□□□ 0.13
ZNF561-213ENST00000471053 PBRM1Q86U86 1689 aa15.87■□□□□ 0.13
ZNF561-213ENST00000471053 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
ZNF561-213ENST00000471053 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
ZNF561-213ENST00000471053 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
ZNF561-213ENST00000471053 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
ZNF561-213ENST00000471053 SHROOM2Q13796 1616 aa15.81■□□□□ 0.12
ZNF561-213ENST00000471053 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
ZNF561-213ENST00000471053 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
ZNF561-213ENST00000471053 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
ZNF561-213ENST00000471053 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
ZNF561-213ENST00000471053 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
ZNF561-213ENST00000471053 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms