RNA–Protein interactions for RNA: ENST00000470908.5

MDM4-211, Transcript of MDM4, p53 regulator, humanhuman

TSL 5

Gene MDM4, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM4-211ENST00000470908 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
MDM4-211ENST00000470908 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
MDM4-211ENST00000470908 ABCC9O60706 1549 aa29■■■□□ 2.23
MDM4-211ENST00000470908 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
MDM4-211ENST00000470908 NACADO15069 1562 aa27.74■■■□□ 2.03
MDM4-211ENST00000470908 MYO15BQ96JP2 1530 aa27.51■■■□□ 2
MDM4-211ENST00000470908 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
MDM4-211ENST00000470908 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
MDM4-211ENST00000470908 UNC13AQ9UPW8 1703 aa27.26■■□□□ 1.95
MDM4-211ENST00000470908 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
MDM4-211ENST00000470908 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.92
MDM4-211ENST00000470908 PABPN1Q86U42 306 aaKnown RBP eCLIP26.91■■□□□ 1.9
MDM4-211ENST00000470908 DNAJC5BQ9UF47 199 aa26.9■■□□□ 1.9
MDM4-211ENST00000470908 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
MDM4-211ENST00000470908 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
MDM4-211ENST00000470908 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.8
MDM4-211ENST00000470908 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
MDM4-211ENST00000470908 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
MDM4-211ENST00000470908 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
MDM4-211ENST00000470908 NCAPD3P42695 1498 aa25.55■■□□□ 1.68
MDM4-211ENST00000470908 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
MDM4-211ENST00000470908 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
MDM4-211ENST00000470908 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
MDM4-211ENST00000470908 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
MDM4-211ENST00000470908 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.66
MDM4-211ENST00000470908 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
MDM4-211ENST00000470908 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
MDM4-211ENST00000470908 CUX2O14529 1486 aa25.05■■□□□ 1.6
MDM4-211ENST00000470908 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
MDM4-211ENST00000470908 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
MDM4-211ENST00000470908 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
MDM4-211ENST00000470908 NESP48681 1621 aa24.98■■□□□ 1.59
MDM4-211ENST00000470908 WIZO95785 1651 aa24.95■■□□□ 1.58
MDM4-211ENST00000470908 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
MDM4-211ENST00000470908 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
MDM4-211ENST00000470908 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
MDM4-211ENST00000470908 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
MDM4-211ENST00000470908 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
MDM4-211ENST00000470908 TOP2AP11388 1531 aaKnown RBP24.72■■□□□ 1.55
MDM4-211ENST00000470908 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
MDM4-211ENST00000470908 MRC2Q9UBG0 1479 aa24.56■■□□□ 1.52
MDM4-211ENST00000470908 CFTRP13569 1480 aa24.55■■□□□ 1.52
MDM4-211ENST00000470908 WDR62O43379 1518 aa24.54■■□□□ 1.52
MDM4-211ENST00000470908 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
MDM4-211ENST00000470908 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
MDM4-211ENST00000470908 FANCD2Q9BXW9 1451 aa24.47■■□□□ 1.51
MDM4-211ENST00000470908 CCDC88BA6NC98 1476 aa24.34■■□□□ 1.49
MDM4-211ENST00000470908 URB2Q14146 1524 aaKnown RBP24.26■■□□□ 1.47
MDM4-211ENST00000470908 ABCC8Q09428 1581 aa24.07■■□□□ 1.44
MDM4-211ENST00000470908 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
MDM4-211ENST00000470908 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
MDM4-211ENST00000470908 IFT140Q96RY7 1462 aa24.01■■□□□ 1.43
MDM4-211ENST00000470908 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
MDM4-211ENST00000470908 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
MDM4-211ENST00000470908 TARBP1Q13395 1621 aaKnown RBP23.87■■□□□ 1.41
MDM4-211ENST00000470908 EIF4G3O43432 1585 aaKnown RBP23.86■■□□□ 1.41
MDM4-211ENST00000470908 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
MDM4-211ENST00000470908 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
MDM4-211ENST00000470908 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
MDM4-211ENST00000470908 CUX1P39880 1505 aa23.71■■□□□ 1.39
MDM4-211ENST00000470908 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
MDM4-211ENST00000470908 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.381e-6■■■■□ 22.5
MDM4-211ENST00000470908 SOGA1O94964 1423 aa23.65■■□□□ 1.38
MDM4-211ENST00000470908 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
MDM4-211ENST00000470908 CHD1O14646 1710 aa23.64■■□□□ 1.37
MDM4-211ENST00000470908 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
MDM4-211ENST00000470908 RIMBP3CA6NJZ7 1639 aa23.56■■□□□ 1.36
MDM4-211ENST00000470908 RIMBP3BA6NNM3 1639 aa23.56■■□□□ 1.36
MDM4-211ENST00000470908 RIMBP3Q9UFD9 1639 aa23.56■■□□□ 1.36
MDM4-211ENST00000470908 MAGI1Q96QZ7 1491 aaPredicted RBP23.51■■□□□ 1.35
MDM4-211ENST00000470908 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
MDM4-211ENST00000470908 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
MDM4-211ENST00000470908 ARHGEF11O15085 1522 aa23.49■■□□□ 1.35
MDM4-211ENST00000470908 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
MDM4-211ENST00000470908 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
MDM4-211ENST00000470908 SNAPC4Q5SXM2 1469 aa23.49■■□□□ 1.35
MDM4-211ENST00000470908 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
MDM4-211ENST00000470908 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
MDM4-211ENST00000470908 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
MDM4-211ENST00000470908 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
MDM4-211ENST00000470908 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
MDM4-211ENST00000470908 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
MDM4-211ENST00000470908 SYNJ2O15056 1496 aa23.39■■□□□ 1.34
MDM4-211ENST00000470908 SYNJ1O43426 1573 aa23.39■■□□□ 1.33
MDM4-211ENST00000470908 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
MDM4-211ENST00000470908 FBLN2P98095 1184 aa23.34■■□□□ 1.33
MDM4-211ENST00000470908 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
MDM4-211ENST00000470908 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
MDM4-211ENST00000470908 ADAMTS12P58397 1594 aa23.26■■□□□ 1.31
MDM4-211ENST00000470908 ERICH3Q5RHP9 1530 aa23.22■■□□□ 1.31
MDM4-211ENST00000470908 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
MDM4-211ENST00000470908 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
MDM4-211ENST00000470908 NUP160Q12769 1436 aa23.12■■□□□ 1.29
MDM4-211ENST00000470908 CYB5RLQ6IPT4 315 aa23.12■■□□□ 1.29
MDM4-211ENST00000470908 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
MDM4-211ENST00000470908 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
MDM4-211ENST00000470908 CUL7Q14999 1698 aa22.97■■□□□ 1.27
MDM4-211ENST00000470908 ERCC6L2Q5T890 1561 aa22.94■■□□□ 1.26
MDM4-211ENST00000470908 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
MDM4-211ENST00000470908 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms