RNA–Protein interactions for RNA: ENST00000470649.1

TTC19-205, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS ALT2 TSL 3

Gene TTC19, Length 760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-205ENST00000470649 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
TTC19-205ENST00000470649 ABCC9O60706 1549 aa21.9■■□□□ 1.1
TTC19-205ENST00000470649 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
TTC19-205ENST00000470649 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
TTC19-205ENST00000470649 RB1CC1Q8TDY2 1594 aa20.6■□□□□ 0.89
TTC19-205ENST00000470649 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
TTC19-205ENST00000470649 NACADO15069 1562 aa20.34■□□□□ 0.85
TTC19-205ENST00000470649 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
TTC19-205ENST00000470649 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
TTC19-205ENST00000470649 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
TTC19-205ENST00000470649 MYO15BQ96JP2 1530 aa19.85■□□□□ 0.77
TTC19-205ENST00000470649 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
TTC19-205ENST00000470649 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
TTC19-205ENST00000470649 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
TTC19-205ENST00000470649 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
TTC19-205ENST00000470649 EIF4G1Q04637 1599 aaKnown RBP19.59■□□□□ 0.73
TTC19-205ENST00000470649 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
TTC19-205ENST00000470649 DCAF1Q9Y4B6 1507 aa19.46■□□□□ 0.71
TTC19-205ENST00000470649 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
TTC19-205ENST00000470649 CUX2O14529 1486 aa18.97■□□□□ 0.63
TTC19-205ENST00000470649 ERCC6Q03468 1493 aa18.91■□□□□ 0.62
TTC19-205ENST00000470649 NCAPD3P42695 1498 aa18.76■□□□□ 0.59
TTC19-205ENST00000470649 NESP48681 1621 aa18.72■□□□□ 0.59
TTC19-205ENST00000470649 ATAD2BQ9ULI0 1458 aa18.69■□□□□ 0.58
TTC19-205ENST00000470649 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
TTC19-205ENST00000470649 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
TTC19-205ENST00000470649 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
TTC19-205ENST00000470649 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
TTC19-205ENST00000470649 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
TTC19-205ENST00000470649 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
TTC19-205ENST00000470649 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
TTC19-205ENST00000470649 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
TTC19-205ENST00000470649 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
TTC19-205ENST00000470649 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
TTC19-205ENST00000470649 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
TTC19-205ENST00000470649 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
TTC19-205ENST00000470649 MROH2BQ7Z745 1585 aa18.29■□□□□ 0.52
TTC19-205ENST00000470649 MRC2Q9UBG0 1479 aa18.22■□□□□ 0.51
TTC19-205ENST00000470649 WDR62O43379 1518 aa18.19■□□□□ 0.5
TTC19-205ENST00000470649 CADPSQ9ULU8 1353 aa18.18■□□□□ 0.5
TTC19-205ENST00000470649 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
TTC19-205ENST00000470649 WIZO95785 1651 aa18.09■□□□□ 0.49
TTC19-205ENST00000470649 CEP164Q9UPV0 1460 aa18.07■□□□□ 0.48
TTC19-205ENST00000470649 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
TTC19-205ENST00000470649 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
TTC19-205ENST00000470649 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
TTC19-205ENST00000470649 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
TTC19-205ENST00000470649 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
TTC19-205ENST00000470649 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
TTC19-205ENST00000470649 CFTRP13569 1480 aa17.89■□□□□ 0.45
TTC19-205ENST00000470649 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
TTC19-205ENST00000470649 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
TTC19-205ENST00000470649 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
TTC19-205ENST00000470649 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
TTC19-205ENST00000470649 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
TTC19-205ENST00000470649 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
TTC19-205ENST00000470649 IFT140Q96RY7 1462 aa17.7■□□□□ 0.42
TTC19-205ENST00000470649 CHD1O14646 1710 aa17.68■□□□□ 0.42
TTC19-205ENST00000470649 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
TTC19-205ENST00000470649 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
TTC19-205ENST00000470649 TOPBP1Q92547 1522 aa17.64■□□□□ 0.41
TTC19-205ENST00000470649 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
TTC19-205ENST00000470649 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
TTC19-205ENST00000470649 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
TTC19-205ENST00000470649 FBLN2P98095 1184 aa17.54■□□□□ 0.4
TTC19-205ENST00000470649 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
TTC19-205ENST00000470649 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
TTC19-205ENST00000470649 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
TTC19-205ENST00000470649 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
TTC19-205ENST00000470649 RAD54L2Q9Y4B4 1467 aa17.42■□□□□ 0.38
TTC19-205ENST00000470649 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
TTC19-205ENST00000470649 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
TTC19-205ENST00000470649 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
TTC19-205ENST00000470649 SOGA1O94964 1423 aa17.33■□□□□ 0.36
TTC19-205ENST00000470649 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
TTC19-205ENST00000470649 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
TTC19-205ENST00000470649 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.36
TTC19-205ENST00000470649 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
TTC19-205ENST00000470649 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
TTC19-205ENST00000470649 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
TTC19-205ENST00000470649 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
TTC19-205ENST00000470649 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
TTC19-205ENST00000470649 CUX1P39880 1505 aa17.21■□□□□ 0.34
TTC19-205ENST00000470649 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
TTC19-205ENST00000470649 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
TTC19-205ENST00000470649 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
TTC19-205ENST00000470649 KIF13AQ9H1H9 1805 aa17.06■□□□□ 0.32
TTC19-205ENST00000470649 CEP170Q5SW79 1584 aa17.02■□□□□ 0.32
TTC19-205ENST00000470649 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
TTC19-205ENST00000470649 GRIN2AQ12879 1464 aa17.01■□□□□ 0.31
TTC19-205ENST00000470649 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
TTC19-205ENST00000470649 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
TTC19-205ENST00000470649 NUP160Q12769 1436 aa16.95■□□□□ 0.3
TTC19-205ENST00000470649 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
TTC19-205ENST00000470649 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
TTC19-205ENST00000470649 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
TTC19-205ENST00000470649 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
TTC19-205ENST00000470649 FAM69CQ0P6D2 419 aa16.83■□□□□ 0.28
TTC19-205ENST00000470649 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
TTC19-205ENST00000470649 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms