RNA–Protein interactions for RNA: ENST00000470378.1

HDAC10-207, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 1,034 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-207ENST00000470378 NISCHQ9Y2I1 1504 aa45.8■■■■■ 4.92
HDAC10-207ENST00000470378 CCDC180Q9P1Z9 1646 aa40.69■■■■■ 4.1
HDAC10-207ENST00000470378 ABCC9O60706 1549 aa39.79■■■■□ 3.96
HDAC10-207ENST00000470378 RB1CC1Q8TDY2 1594 aa38.31■■■■□ 3.72
HDAC10-207ENST00000470378 NACADO15069 1562 aa38.28■■■■□ 3.72
HDAC10-207ENST00000470378 DCAF8L2P0C7V8 631 aa38.21■■■■□ 3.71
HDAC10-207ENST00000470378 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
HDAC10-207ENST00000470378 MYO15BQ96JP2 1530 aa38.11■■■■□ 3.69
HDAC10-207ENST00000470378 DCAF1Q9Y4B6 1507 aa37.93■■■■□ 3.66
HDAC10-207ENST00000470378 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
HDAC10-207ENST00000470378 PABPN1Q86U42 306 aaKnown RBP eCLIP37.2■■■■□ 3.55
HDAC10-207ENST00000470378 BICRAQ9NZM4 1560 aa37.14■■■■□ 3.54
HDAC10-207ENST00000470378 SCRIBQ14160 1630 aa37.1■■■■□ 3.53
HDAC10-207ENST00000470378 SHROOM4Q9ULL8 1493 aa36.82■■■■□ 3.49
HDAC10-207ENST00000470378 DNAJC5BQ9UF47 199 aa36.54■■■■□ 3.44
HDAC10-207ENST00000470378 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
HDAC10-207ENST00000470378 CC2D2AQ9P2K1 1620 aa35.99■■■■□ 3.35
HDAC10-207ENST00000470378 CECR2Q9BXF3 1484 aa35.78■■■■□ 3.32
HDAC10-207ENST00000470378 SMARCA4P51532 1647 aa35.51■■■■□ 3.28
HDAC10-207ENST00000470378 BAZ1AQ9NRL2 1556 aaPredicted RBP35.49■■■■□ 3.27
HDAC10-207ENST00000470378 NCAPD3P42695 1498 aa35.35■■■■□ 3.25
HDAC10-207ENST00000470378 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
HDAC10-207ENST00000470378 SMARCA2P51531 1590 aa35.3■■■■□ 3.24
HDAC10-207ENST00000470378 MROH2BQ7Z745 1585 aa35.28■■■■□ 3.24
HDAC10-207ENST00000470378 PEG3Q9GZU2 1588 aa35.2■■■■□ 3.23
HDAC10-207ENST00000470378 HMGXB3Q12766 1538 aa35.16■■■■□ 3.22
HDAC10-207ENST00000470378 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
HDAC10-207ENST00000470378 RSF1Q96T23 1441 aaPredicted RBP34.9■■■■□ 3.18
HDAC10-207ENST00000470378 WIZO95785 1651 aa34.86■■■■□ 3.17
HDAC10-207ENST00000470378 TOP2AP11388 1531 aaKnown RBP34.54■■■■□ 3.12
HDAC10-207ENST00000470378 NESP48681 1621 aa34.44■■■■□ 3.1
HDAC10-207ENST00000470378 LAMC3Q9Y6N6 1575 aa34.38■■■■□ 3.09
HDAC10-207ENST00000470378 CADPSQ9ULU8 1353 aa34.31■■■■□ 3.08
HDAC10-207ENST00000470378 ERCC6Q03468 1493 aa34.31■■■■□ 3.08
HDAC10-207ENST00000470378 PDS5BQ9NTI5 1447 aa34.17■■■■□ 3.06
HDAC10-207ENST00000470378 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
HDAC10-207ENST00000470378 CFTRP13569 1480 aa34.11■■■■□ 3.05
HDAC10-207ENST00000470378 KIF21AQ7Z4S6 1674 aa33.99■■■■□ 3.03
HDAC10-207ENST00000470378 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
HDAC10-207ENST00000470378 CUX2O14529 1486 aa33.98■■■■□ 3.03
HDAC10-207ENST00000470378 THOC2Q8NI27 1593 aaKnown RBP33.92■■■■□ 3.02
HDAC10-207ENST00000470378 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
HDAC10-207ENST00000470378 CEP164Q9UPV0 1460 aa33.85■■■■□ 3.01
HDAC10-207ENST00000470378 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
HDAC10-207ENST00000470378 PRDM2Q13029 1718 aa33.76■■■□□ 2.99
HDAC10-207ENST00000470378 WDR62O43379 1518 aa33.69■■■□□ 2.98
HDAC10-207ENST00000470378 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
HDAC10-207ENST00000470378 ABCC8Q09428 1581 aa33.38■■■□□ 2.93
HDAC10-207ENST00000470378 TOPBP1Q92547 1522 aa33.35■■■□□ 2.93
HDAC10-207ENST00000470378 DNMBPQ6XZF7 1577 aa33.31■■■□□ 2.92
HDAC10-207ENST00000470378 IFT140Q96RY7 1462 aa33.16■■■□□ 2.9
HDAC10-207ENST00000470378 CUX1P39880 1505 aa33.09■■■□□ 2.89
HDAC10-207ENST00000470378 POLA1P09884 1462 aaPredicted RBP33.07■■■□□ 2.88
HDAC10-207ENST00000470378 FGD5Q6ZNL6 1462 aa32.99■■■□□ 2.87
HDAC10-207ENST00000470378 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
HDAC10-207ENST00000470378 TARBP1Q13395 1621 aaKnown RBP32.97■■■□□ 2.87
HDAC10-207ENST00000470378 SOGA1O94964 1423 aa32.94■■■□□ 2.86
HDAC10-207ENST00000470378 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
HDAC10-207ENST00000470378 RAD54L2Q9Y4B4 1467 aa32.92■■■□□ 2.86
HDAC10-207ENST00000470378 WRNQ14191 1432 aaPredicted RBP eCLIP32.91■■■□□ 2.86
HDAC10-207ENST00000470378 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
HDAC10-207ENST00000470378 TOP2BQ02880 1626 aa32.81■■■□□ 2.84
HDAC10-207ENST00000470378 BIVM-ERCC5R4GMW8 1640 aa32.8■■■□□ 2.84
HDAC10-207ENST00000470378 AQRO60306 1485 aaKnown RBP eCLIP32.8■■■□□ 2.844e-7■■□□□ 13.4
HDAC10-207ENST00000470378 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
HDAC10-207ENST00000470378 WDR97A6NE52 1622 aa32.75■■■□□ 2.83
HDAC10-207ENST00000470378 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
HDAC10-207ENST00000470378 ABCA10Q8WWZ4 1543 aa32.69■■■□□ 2.82
HDAC10-207ENST00000470378 OSCARQ8IYS5 282 aa32.58■■■□□ 2.81
HDAC10-207ENST00000470378 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
HDAC10-207ENST00000470378 GAPVD1Q14C86 1478 aa32.55■■■□□ 2.8
HDAC10-207ENST00000470378 ABCA5Q8WWZ7 1642 aa32.52■■■□□ 2.8
HDAC10-207ENST00000470378 SNAPC4Q5SXM2 1469 aa32.49■■■□□ 2.79
HDAC10-207ENST00000470378 MAGI1Q96QZ7 1491 aaPredicted RBP32.48■■■□□ 2.79
HDAC10-207ENST00000470378 PBRM1Q86U86 1689 aa32.43■■■□□ 2.78
HDAC10-207ENST00000470378 CHD1O14646 1710 aa32.38■■■□□ 2.77
HDAC10-207ENST00000470378 FBLN2P98095 1184 aa32.38■■■□□ 2.77
HDAC10-207ENST00000470378 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
HDAC10-207ENST00000470378 CHMP7Q8WUX9 453 aaPredicted RBP32.33■■■□□ 2.77
HDAC10-207ENST00000470378 ERICH3Q5RHP9 1530 aa32.3■■■□□ 2.76
HDAC10-207ENST00000470378 KIF27Q86VH2 1401 aa32.23■■■□□ 2.75
HDAC10-207ENST00000470378 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
HDAC10-207ENST00000470378 FHAD1B1AJZ9 1412 aa32.2■■■□□ 2.75
HDAC10-207ENST00000470378 GRIN2AQ12879 1464 aa32.13■■■□□ 2.73
HDAC10-207ENST00000470378 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
HDAC10-207ENST00000470378 IGF1RP08069 1367 aa32.1■■■□□ 2.73
HDAC10-207ENST00000470378 CLASP1Q7Z460 1538 aa32.1■■■□□ 2.73
HDAC10-207ENST00000470378 NUP160Q12769 1436 aa32.01■■■□□ 2.72
HDAC10-207ENST00000470378 ARHGEF11O15085 1522 aa32.01■■■□□ 2.72
HDAC10-207ENST00000470378 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
HDAC10-207ENST00000470378 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
HDAC10-207ENST00000470378 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
HDAC10-207ENST00000470378 CUL7Q14999 1698 aa31.98■■■□□ 2.71
HDAC10-207ENST00000470378 CEP170Q5SW79 1584 aa31.95■■■□□ 2.71
HDAC10-207ENST00000470378 CARMIL1Q5VZK9 1371 aa31.91■■■□□ 2.7
HDAC10-207ENST00000470378 RUSC2Q8N2Y8 1516 aa31.9■■■□□ 2.7
HDAC10-207ENST00000470378 ARAP1Q96P48 1450 aa31.77■■■□□ 2.68
HDAC10-207ENST00000470378 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
HDAC10-207ENST00000470378 SHROOM2Q13796 1616 aa31.74■■■□□ 2.67
HDAC10-207ENST00000470378 CYB5RLQ6IPT4 315 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms