RNA–Protein interactions for RNA: ENST00000470273.5

FGD2-205, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 5

Gene FGD2, Length 1,255 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-205ENST00000470273 NISCHQ9Y2I1 1504 aa30.35■■■□□ 2.45
FGD2-205ENST00000470273 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
FGD2-205ENST00000470273 ABCC9O60706 1549 aa27.26■■□□□ 1.96
FGD2-205ENST00000470273 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
FGD2-205ENST00000470273 NACADO15069 1562 aa25.83■■□□□ 1.73
FGD2-205ENST00000470273 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
FGD2-205ENST00000470273 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
FGD2-205ENST00000470273 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
FGD2-205ENST00000470273 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
FGD2-205ENST00000470273 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
FGD2-205ENST00000470273 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
FGD2-205ENST00000470273 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
FGD2-205ENST00000470273 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
FGD2-205ENST00000470273 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
FGD2-205ENST00000470273 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
FGD2-205ENST00000470273 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.54
FGD2-205ENST00000470273 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
FGD2-205ENST00000470273 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
FGD2-205ENST00000470273 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
FGD2-205ENST00000470273 SMARCA2P51531 1590 aa23.73■■□□□ 1.39
FGD2-205ENST00000470273 SMARCA4P51532 1647 aa23.7■■□□□ 1.39
FGD2-205ENST00000470273 ATAD2BQ9ULI0 1458 aa23.7■■□□□ 1.38
FGD2-205ENST00000470273 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
FGD2-205ENST00000470273 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
FGD2-205ENST00000470273 BAZ1AQ9NRL2 1556 aaPredicted RBP23.62■■□□□ 1.37
FGD2-205ENST00000470273 CUX2O14529 1486 aa23.6■■□□□ 1.37
FGD2-205ENST00000470273 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
FGD2-205ENST00000470273 DNAJC5Q9H3Z4 198 aa23.52■■□□□ 1.36
FGD2-205ENST00000470273 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
FGD2-205ENST00000470273 NESP48681 1621 aa23.37■■□□□ 1.33
FGD2-205ENST00000470273 MROH2BQ7Z745 1585 aa23.34■■□□□ 1.33
FGD2-205ENST00000470273 LAMC3Q9Y6N6 1575 aa23.33■■□□□ 1.33
FGD2-205ENST00000470273 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
FGD2-205ENST00000470273 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
FGD2-205ENST00000470273 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
FGD2-205ENST00000470273 WIZO95785 1651 aa23.07■■□□□ 1.28
FGD2-205ENST00000470273 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
FGD2-205ENST00000470273 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
FGD2-205ENST00000470273 WDR62O43379 1518 aa22.91■■□□□ 1.26
FGD2-205ENST00000470273 CEP164Q9UPV0 1460 aa22.9■■□□□ 1.26
FGD2-205ENST00000470273 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
FGD2-205ENST00000470273 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
FGD2-205ENST00000470273 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
FGD2-205ENST00000470273 CFTRP13569 1480 aa22.8■■□□□ 1.24
FGD2-205ENST00000470273 PRDM2Q13029 1718 aa22.64■■□□□ 1.21
FGD2-205ENST00000470273 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
FGD2-205ENST00000470273 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
FGD2-205ENST00000470273 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
FGD2-205ENST00000470273 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
FGD2-205ENST00000470273 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
FGD2-205ENST00000470273 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
FGD2-205ENST00000470273 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
FGD2-205ENST00000470273 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
FGD2-205ENST00000470273 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
FGD2-205ENST00000470273 ZNF608Q9ULD9 1512 aaPredicted RBP22.3■■□□□ 1.16
FGD2-205ENST00000470273 EIF4G3O43432 1585 aaKnown RBP22.26■■□□□ 1.15
FGD2-205ENST00000470273 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
FGD2-205ENST00000470273 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
FGD2-205ENST00000470273 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
FGD2-205ENST00000470273 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
FGD2-205ENST00000470273 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
FGD2-205ENST00000470273 AQRO60306 1485 aaKnown RBP eCLIP22.11■■□□□ 1.13
FGD2-205ENST00000470273 ARHGEF11O15085 1522 aa22.11■■□□□ 1.13
FGD2-205ENST00000470273 CHD1O14646 1710 aa22.08■■□□□ 1.12
FGD2-205ENST00000470273 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
FGD2-205ENST00000470273 SOGA1O94964 1423 aa22.05■■□□□ 1.12
FGD2-205ENST00000470273 FBLN2P98095 1184 aa22.03■■□□□ 1.12
FGD2-205ENST00000470273 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
FGD2-205ENST00000470273 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
FGD2-205ENST00000470273 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
FGD2-205ENST00000470273 CUX1P39880 1505 aa21.95■■□□□ 1.1
FGD2-205ENST00000470273 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
FGD2-205ENST00000470273 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
FGD2-205ENST00000470273 CHIC1Q5VXU3 224 aa21.92■■□□□ 1.1
FGD2-205ENST00000470273 CYB5RLQ6IPT4 315 aa21.91■■□□□ 1.1
FGD2-205ENST00000470273 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
FGD2-205ENST00000470273 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
FGD2-205ENST00000470273 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
FGD2-205ENST00000470273 ARAP1Q96P48 1450 aa21.85■■□□□ 1.09
FGD2-205ENST00000470273 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
FGD2-205ENST00000470273 CLASP1Q7Z460 1538 aa21.82■■□□□ 1.08
FGD2-205ENST00000470273 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
FGD2-205ENST00000470273 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
FGD2-205ENST00000470273 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
FGD2-205ENST00000470273 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
FGD2-205ENST00000470273 TRHP20396 242 aaPredicted RBP21.74■■□□□ 1.07
FGD2-205ENST00000470273 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
FGD2-205ENST00000470273 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
FGD2-205ENST00000470273 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
FGD2-205ENST00000470273 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
FGD2-205ENST00000470273 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
FGD2-205ENST00000470273 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
FGD2-205ENST00000470273 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
FGD2-205ENST00000470273 ERICH3Q5RHP9 1530 aa21.53■■□□□ 1.04
FGD2-205ENST00000470273 NUP160Q12769 1436 aa21.51■■□□□ 1.03
FGD2-205ENST00000470273 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
FGD2-205ENST00000470273 SHROOM2Q13796 1616 aa21.43■■□□□ 1.02
FGD2-205ENST00000470273 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
FGD2-205ENST00000470273 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
FGD2-205ENST00000470273 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms