RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
SCYL3-205ENST00000470238 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
SCYL3-205ENST00000470238 ZCCHC6Q5VYS8 1495 aaKnown RBP27.91■■■□□ 2.06
SCYL3-205ENST00000470238 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
SCYL3-205ENST00000470238 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
SCYL3-205ENST00000470238 ABCC9O60706 1549 aa27.16■■□□□ 1.94
SCYL3-205ENST00000470238 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
SCYL3-205ENST00000470238 MYO15BQ96JP2 1530 aa27.09■■□□□ 1.93
SCYL3-205ENST00000470238 NACADO15069 1562 aa26.88■■□□□ 1.89
SCYL3-205ENST00000470238 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
SCYL3-205ENST00000470238 SCRIBQ14160 1630 aa26.57■■□□□ 1.84
SCYL3-205ENST00000470238 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.79
SCYL3-205ENST00000470238 UNC13AQ9UPW8 1703 aa26.03■■□□□ 1.76
SCYL3-205ENST00000470238 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
SCYL3-205ENST00000470238 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
SCYL3-205ENST00000470238 CECR2Q9BXF3 1484 aa25.74■■□□□ 1.71
SCYL3-205ENST00000470238 BAZ1AQ9NRL2 1556 aaPredicted RBP25.63■■□□□ 1.69
SCYL3-205ENST00000470238 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
SCYL3-205ENST00000470238 MROH2BQ7Z745 1585 aa25.62■■□□□ 1.69
SCYL3-205ENST00000470238 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
SCYL3-205ENST00000470238 WIZO95785 1651 aa25.42■■□□□ 1.66
SCYL3-205ENST00000470238 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
SCYL3-205ENST00000470238 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
SCYL3-205ENST00000470238 CHIC1Q5VXU3 224 aa25.15■■□□□ 1.62
SCYL3-205ENST00000470238 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
SCYL3-205ENST00000470238 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
SCYL3-205ENST00000470238 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
SCYL3-205ENST00000470238 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
SCYL3-205ENST00000470238 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
SCYL3-205ENST00000470238 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
SCYL3-205ENST00000470238 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
SCYL3-205ENST00000470238 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
SCYL3-205ENST00000470238 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
SCYL3-205ENST00000470238 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
SCYL3-205ENST00000470238 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
SCYL3-205ENST00000470238 CFTRP13569 1480 aa24.28■■□□□ 1.48
SCYL3-205ENST00000470238 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
SCYL3-205ENST00000470238 LOC105371045A0A1W2PR82 267 aa24.17■■□□□ 1.46
SCYL3-205ENST00000470238 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
SCYL3-205ENST00000470238 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
SCYL3-205ENST00000470238 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
SCYL3-205ENST00000470238 TOP2BQ02880 1626 aa24.07■■□□□ 1.44
SCYL3-205ENST00000470238 EEA1Q15075 1411 aa24.05■■□□□ 1.44
SCYL3-205ENST00000470238 BIVM-ERCC5R4GMW8 1640 aa24.05■■□□□ 1.44
SCYL3-205ENST00000470238 SOGA1O94964 1423 aa24.01■■□□□ 1.43
SCYL3-205ENST00000470238 CUX1P39880 1505 aa23.96■■□□□ 1.43
SCYL3-205ENST00000470238 LAMC3Q9Y6N6 1575 aa23.94■■□□□ 1.42
SCYL3-205ENST00000470238 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
SCYL3-205ENST00000470238 RUSC2Q8N2Y8 1516 aa23.89■■□□□ 1.41
SCYL3-205ENST00000470238 NESP48681 1621 aa23.87■■□□□ 1.41
SCYL3-205ENST00000470238 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
SCYL3-205ENST00000470238 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
SCYL3-205ENST00000470238 EHMT2Q96KQ7 1210 aa23.8■■□□□ 1.4
SCYL3-205ENST00000470238 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
SCYL3-205ENST00000470238 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
SCYL3-205ENST00000470238 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
SCYL3-205ENST00000470238 GOLGA3Q08378 1498 aa23.71■■□□□ 1.39
SCYL3-205ENST00000470238 KIF21BO75037 1637 aa23.71■■□□□ 1.39
SCYL3-205ENST00000470238 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
SCYL3-205ENST00000470238 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
SCYL3-205ENST00000470238 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
SCYL3-205ENST00000470238 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
SCYL3-205ENST00000470238 KIF21AQ7Z4S6 1674 aa23.6■■□□□ 1.37
SCYL3-205ENST00000470238 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
SCYL3-205ENST00000470238 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.37
SCYL3-205ENST00000470238 CUX2O14529 1486 aa23.57■■□□□ 1.36
SCYL3-205ENST00000470238 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
SCYL3-205ENST00000470238 CEP162Q5TB80 1403 aa23.53■■□□□ 1.36
SCYL3-205ENST00000470238 PRXQ9BXM0 1461 aa23.53■■□□□ 1.36
SCYL3-205ENST00000470238 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
SCYL3-205ENST00000470238 RAPGEF2Q9Y4G8 1499 aa23.52■■□□□ 1.36
SCYL3-205ENST00000470238 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
SCYL3-205ENST00000470238 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
SCYL3-205ENST00000470238 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
SCYL3-205ENST00000470238 IGF1RP08069 1367 aa23.42■■□□□ 1.34
SCYL3-205ENST00000470238 WDR97A6NE52 1622 aa23.39■■□□□ 1.34
SCYL3-205ENST00000470238 CLIP1P30622 1438 aa23.32■■□□□ 1.32
SCYL3-205ENST00000470238 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
SCYL3-205ENST00000470238 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
SCYL3-205ENST00000470238 WDR62O43379 1518 aa23.3■■□□□ 1.32
SCYL3-205ENST00000470238 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
SCYL3-205ENST00000470238 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
SCYL3-205ENST00000470238 CUL7Q14999 1698 aa23.27■■□□□ 1.32
SCYL3-205ENST00000470238 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
SCYL3-205ENST00000470238 PCGF6Q9BYE7 350 aa23.24■■□□□ 1.31
SCYL3-205ENST00000470238 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
SCYL3-205ENST00000470238 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
SCYL3-205ENST00000470238 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
SCYL3-205ENST00000470238 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
SCYL3-205ENST00000470238 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.3
SCYL3-205ENST00000470238 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
SCYL3-205ENST00000470238 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
SCYL3-205ENST00000470238 ARAP1Q96P48 1450 aa23.06■■□□□ 1.28
SCYL3-205ENST00000470238 AQRO60306 1485 aaKnown RBP eCLIP23.05■■□□□ 1.28
SCYL3-205ENST00000470238 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
SCYL3-205ENST00000470238 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
SCYL3-205ENST00000470238 PPARGC1BQ86YN6 1023 aaKnown RBP23.03■■□□□ 1.28
SCYL3-205ENST00000470238 CTTNBP2Q8WZ74 1663 aa23.01■■□□□ 1.27
SCYL3-205ENST00000470238 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SCYL3-205ENST00000470238 FHAD1B1AJZ9 1412 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms