RNA–Protein interactions for RNA: ENST00000470193.3

HOXB6-202, Transcript of homeobox B6, humanhuman

TSL 5

Gene HOXB6, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-202ENST00000470193 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
HOXB6-202ENST00000470193 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
HOXB6-202ENST00000470193 ABCC9O60706 1549 aa26.91■■□□□ 1.9
HOXB6-202ENST00000470193 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
HOXB6-202ENST00000470193 NACADO15069 1562 aa25.82■■□□□ 1.72
HOXB6-202ENST00000470193 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
HOXB6-202ENST00000470193 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
HOXB6-202ENST00000470193 ZCCHC6Q5VYS8 1495 aaKnown RBP25.53■■□□□ 1.68
HOXB6-202ENST00000470193 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
HOXB6-202ENST00000470193 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
HOXB6-202ENST00000470193 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
HOXB6-202ENST00000470193 BICRAQ9NZM4 1560 aa25.01■■□□□ 1.59
HOXB6-202ENST00000470193 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
HOXB6-202ENST00000470193 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
HOXB6-202ENST00000470193 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
HOXB6-202ENST00000470193 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
HOXB6-202ENST00000470193 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
HOXB6-202ENST00000470193 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
HOXB6-202ENST00000470193 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
HOXB6-202ENST00000470193 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
HOXB6-202ENST00000470193 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
HOXB6-202ENST00000470193 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
HOXB6-202ENST00000470193 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
HOXB6-202ENST00000470193 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
HOXB6-202ENST00000470193 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
HOXB6-202ENST00000470193 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
HOXB6-202ENST00000470193 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
HOXB6-202ENST00000470193 WIZO95785 1651 aa23.38■■□□□ 1.33
HOXB6-202ENST00000470193 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
HOXB6-202ENST00000470193 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
HOXB6-202ENST00000470193 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
HOXB6-202ENST00000470193 NESP48681 1621 aa23.2■■□□□ 1.3
HOXB6-202ENST00000470193 TOP2AP11388 1531 aaKnown RBP23.16■■□□□ 1.3
HOXB6-202ENST00000470193 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
HOXB6-202ENST00000470193 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
HOXB6-202ENST00000470193 CUX2O14529 1486 aa23.09■■□□□ 1.29
HOXB6-202ENST00000470193 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
HOXB6-202ENST00000470193 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
HOXB6-202ENST00000470193 CFTRP13569 1480 aa22.92■■□□□ 1.26
HOXB6-202ENST00000470193 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
HOXB6-202ENST00000470193 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
HOXB6-202ENST00000470193 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
HOXB6-202ENST00000470193 MRC2Q9UBG0 1479 aa22.83■■□□□ 1.25
HOXB6-202ENST00000470193 PRDM2Q13029 1718 aa22.8■■□□□ 1.24
HOXB6-202ENST00000470193 WDR62O43379 1518 aa22.74■■□□□ 1.23
HOXB6-202ENST00000470193 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
HOXB6-202ENST00000470193 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
HOXB6-202ENST00000470193 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
HOXB6-202ENST00000470193 DNAJC5Q9H3Z4 198 aa22.52■■□□□ 1.2
HOXB6-202ENST00000470193 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
HOXB6-202ENST00000470193 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
HOXB6-202ENST00000470193 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
HOXB6-202ENST00000470193 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
HOXB6-202ENST00000470193 ZNF608Q9ULD9 1512 aaPredicted RBP22.2■■□□□ 1.14
HOXB6-202ENST00000470193 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
HOXB6-202ENST00000470193 CUX1P39880 1505 aa22.17■■□□□ 1.14
HOXB6-202ENST00000470193 SOGA1O94964 1423 aa22.17■■□□□ 1.14
HOXB6-202ENST00000470193 EIF4G3O43432 1585 aaKnown RBP22.16■■□□□ 1.14
HOXB6-202ENST00000470193 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
HOXB6-202ENST00000470193 OSCARQ8IYS5 282 aa22.11■■□□□ 1.13
HOXB6-202ENST00000470193 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
HOXB6-202ENST00000470193 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
HOXB6-202ENST00000470193 AQRO60306 1485 aaKnown RBP eCLIP22.08■■□□□ 1.12
HOXB6-202ENST00000470193 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
HOXB6-202ENST00000470193 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
HOXB6-202ENST00000470193 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
HOXB6-202ENST00000470193 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
HOXB6-202ENST00000470193 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
HOXB6-202ENST00000470193 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
HOXB6-202ENST00000470193 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
HOXB6-202ENST00000470193 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
HOXB6-202ENST00000470193 CHD1O14646 1710 aa21.92■■□□□ 1.1
HOXB6-202ENST00000470193 FBLN2P98095 1184 aa21.91■■□□□ 1.1
HOXB6-202ENST00000470193 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
HOXB6-202ENST00000470193 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
HOXB6-202ENST00000470193 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
HOXB6-202ENST00000470193 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
HOXB6-202ENST00000470193 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
HOXB6-202ENST00000470193 CHMP7Q8WUX9 453 aaPredicted RBP21.85■■□□□ 1.09
HOXB6-202ENST00000470193 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
HOXB6-202ENST00000470193 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
HOXB6-202ENST00000470193 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
HOXB6-202ENST00000470193 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
HOXB6-202ENST00000470193 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
HOXB6-202ENST00000470193 ERICH3Q5RHP9 1530 aa21.71■■□□□ 1.07
HOXB6-202ENST00000470193 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
HOXB6-202ENST00000470193 ADAMTS12P58397 1594 aa21.67■■□□□ 1.06
HOXB6-202ENST00000470193 FHAD1B1AJZ9 1412 aa21.66■■□□□ 1.06
HOXB6-202ENST00000470193 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
HOXB6-202ENST00000470193 GRIN2AQ12879 1464 aa21.64■■□□□ 1.05
HOXB6-202ENST00000470193 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
HOXB6-202ENST00000470193 CYB5RLQ6IPT4 315 aa21.53■■□□□ 1.04
HOXB6-202ENST00000470193 NUP160Q12769 1436 aa21.53■■□□□ 1.04
HOXB6-202ENST00000470193 CUL7Q14999 1698 aa21.51■■□□□ 1.03
HOXB6-202ENST00000470193 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
HOXB6-202ENST00000470193 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
HOXB6-202ENST00000470193 IGF1RP08069 1367 aa21.48■■□□□ 1.03
HOXB6-202ENST00000470193 CARMIL1Q5VZK9 1371 aa21.39■■□□□ 1.02
HOXB6-202ENST00000470193 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
HOXB6-202ENST00000470193 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms