RNA–Protein interactions for RNA: ENST00000468417.1

CBWD2-207, Transcript of COBW domain containing 2, humanhuman

TSL 1 (best)

Gene CBWD2, Length 2,973 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2-207ENST00000468417 POTEDQ86YR6 584 aa9.22□□□□□ -0.93
CBWD2-207ENST00000468417 NISCHQ9Y2I1 1504 aa8.66□□□□□ -1.02
CBWD2-207ENST00000468417 CCDC180Q9P1Z9 1646 aa8.1□□□□□ -1.11
CBWD2-207ENST00000468417 AEBP2Q6ZN18 517 aaPredicted RBP7.87□□□□□ -1.15
CBWD2-207ENST00000468417 ABCC9O60706 1549 aa7.67□□□□□ -1.18
CBWD2-207ENST00000468417 MYO15BQ96JP2 1530 aa7.67□□□□□ -1.18
CBWD2-207ENST00000468417 CHIC1Q5VXU3 224 aa7.66□□□□□ -1.18
CBWD2-207ENST00000468417 SHROOM4Q9ULL8 1493 aa7.62□□□□□ -1.19
CBWD2-207ENST00000468417 RB1CC1Q8TDY2 1594 aa7.6□□□□□ -1.19
CBWD2-207ENST00000468417 NACADO15069 1562 aa7.6□□□□□ -1.19
CBWD2-207ENST00000468417 DCAF1Q9Y4B6 1507 aa7.45□□□□□ -1.22
CBWD2-207ENST00000468417 UNC13AQ9UPW8 1703 aa7.39□□□□□ -1.23
CBWD2-207ENST00000468417 BICRAQ9NZM4 1560 aa7.34□□□□□ -1.23
CBWD2-207ENST00000468417 DNAJC5BQ9UF47 199 aa7.26□□□□□ -1.25
CBWD2-207ENST00000468417 ZCCHC6Q5VYS8 1495 aaKnown RBP7.2□□□□□ -1.26
CBWD2-207ENST00000468417 CC2D2AQ9P2K1 1620 aa7.14□□□□□ -1.27
CBWD2-207ENST00000468417 EIF4G1Q04637 1599 aaKnown RBP7.13□□□□□ -1.27
CBWD2-207ENST00000468417 CECR2Q9BXF3 1484 aa7.08□□□□□ -1.28
CBWD2-207ENST00000468417 CUX2O14529 1486 aa7.07□□□□□ -1.28
CBWD2-207ENST00000468417 SENP3Q9H4L4 574 aaPredicted RBP7.07□□□□□ -1.28
CBWD2-207ENST00000468417 MSH5O43196 834 aa7.07□□□□□ -1.28
CBWD2-207ENST00000468417 DNAJC5Q9H3Z4 198 aa6.98□□□□□ -1.29
CBWD2-207ENST00000468417 HMGXB3Q12766 1538 aa6.97□□□□□ -1.29
CBWD2-207ENST00000468417 NCAPD3P42695 1498 aa6.96□□□□□ -1.3
CBWD2-207ENST00000468417 PEG3Q9GZU2 1588 aa6.95□□□□□ -1.3
CBWD2-207ENST00000468417 POTEHQ6S545 545 aa6.93□□□□□ -1.3
CBWD2-207ENST00000468417 PABPN1Q86U42 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
CBWD2-207ENST00000468417 SMARCA2P51531 1590 aa6.92□□□□□ -1.3
CBWD2-207ENST00000468417 SCRIBQ14160 1630 aa6.92□□□□□ -1.3
CBWD2-207ENST00000468417 LAMC3Q9Y6N6 1575 aa6.85□□□□□ -1.31
CBWD2-207ENST00000468417 THOC2Q8NI27 1593 aaKnown RBP6.83□□□□□ -1.32
CBWD2-207ENST00000468417 SMARCA4P51532 1647 aa6.8□□□□□ -1.32
CBWD2-207ENST00000468417 ATAD2BQ9ULI0 1458 aa6.8□□□□□ -1.32
CBWD2-207ENST00000468417 BAZ1AQ9NRL2 1556 aaPredicted RBP6.78□□□□□ -1.32
CBWD2-207ENST00000468417 PHF23Q9BUL5 403 aaPredicted RBP6.76□□□□□ -1.33
CBWD2-207ENST00000468417 WDR62O43379 1518 aa6.74□□□□□ -1.33
CBWD2-207ENST00000468417 ERCC6Q03468 1493 aa6.69□□□□□ -1.34
CBWD2-207ENST00000468417 PDS5BQ9NTI5 1447 aa6.69□□□□□ -1.34
CBWD2-207ENST00000468417 PRDM2Q13029 1718 aa6.68□□□□□ -1.34
CBWD2-207ENST00000468417 BAZ1BQ9UIG0 1483 aaKnown RBP6.67□□□□□ -1.34
CBWD2-207ENST00000468417 DCAF8L2P0C7V8 631 aa6.66□□□□□ -1.34
CBWD2-207ENST00000468417 MRC2Q9UBG0 1479 aa6.66□□□□□ -1.34
CBWD2-207ENST00000468417 WDR97A6NE52 1622 aa6.65□□□□□ -1.34
CBWD2-207ENST00000468417 KIF21AQ7Z4S6 1674 aa6.65□□□□□ -1.35
CBWD2-207ENST00000468417 CACNB1Q02641 598 aaPredicted RBP6.63□□□□□ -1.35
CBWD2-207ENST00000468417 CADPSQ9ULU8 1353 aa6.6□□□□□ -1.35
CBWD2-207ENST00000468417 CFTRP13569 1480 aa6.58□□□□□ -1.36
CBWD2-207ENST00000468417 NESP48681 1621 aa6.56□□□□□ -1.36
CBWD2-207ENST00000468417 ABCC8Q09428 1581 aa6.56□□□□□ -1.36
CBWD2-207ENST00000468417 CEP164Q9UPV0 1460 aa6.54□□□□□ -1.36
CBWD2-207ENST00000468417 MROH2BQ7Z745 1585 aa6.53□□□□□ -1.36
CBWD2-207ENST00000468417 TOP2AP11388 1531 aaKnown RBP6.52□□□□□ -1.36
CBWD2-207ENST00000468417 IFT140Q96RY7 1462 aa6.51□□□□□ -1.37
CBWD2-207ENST00000468417 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
CBWD2-207ENST00000468417 FANCD2Q9BXW9 1451 aa6.49□□□□□ -1.37
CBWD2-207ENST00000468417 RIMBP3CA6NJZ7 1639 aa6.47□□□□□ -1.37
CBWD2-207ENST00000468417 RIMBP3BA6NNM3 1639 aa6.47□□□□□ -1.37
CBWD2-207ENST00000468417 RIMBP3Q9UFD9 1639 aa6.47□□□□□ -1.37
CBWD2-207ENST00000468417 FOXD1Q16676 465 aa6.45□□□□□ -1.38
CBWD2-207ENST00000468417 URB2Q14146 1524 aaKnown RBP6.45□□□□□ -1.38
CBWD2-207ENST00000468417 DNMBPQ6XZF7 1577 aa6.44□□□□□ -1.38
CBWD2-207ENST00000468417 TARBP1Q13395 1621 aaKnown RBP6.43□□□□□ -1.38
CBWD2-207ENST00000468417 WIZO95785 1651 aa6.42□□□□□ -1.38
CBWD2-207ENST00000468417 CLASP1Q7Z460 1538 aa6.42□□□□□ -1.38
CBWD2-207ENST00000468417 OSCARQ8IYS5 282 aa6.42□□□□□ -1.38
CBWD2-207ENST00000468417 ARHGEF11O15085 1522 aa6.41□□□□□ -1.38
CBWD2-207ENST00000468417 EIF4G3O43432 1585 aaKnown RBP6.39□□□□□ -1.39
CBWD2-207ENST00000468417 TOPBP1Q92547 1522 aa6.39□□□□□ -1.39
CBWD2-207ENST00000468417 MAGI1Q96QZ7 1491 aaPredicted RBP6.37□□□□□ -1.39
CBWD2-207ENST00000468417 CHD1O14646 1710 aa6.36□□□□□ -1.39
CBWD2-207ENST00000468417 SYNJ1O43426 1573 aa6.35□□□□□ -1.39
CBWD2-207ENST00000468417 ARAP1Q96P48 1450 aa6.33□□□□□ -1.4
CBWD2-207ENST00000468417 SHROOM2Q13796 1616 aa6.32□□□□□ -1.4
CBWD2-207ENST00000468417 ABCA5Q8WWZ7 1642 aa6.29□□□□□ -1.4
CBWD2-207ENST00000468417 CCDC88BA6NC98 1476 aa6.29□□□□□ -1.4
CBWD2-207ENST00000468417 SYNJ2O15056 1496 aa6.28□□□□□ -1.4
CBWD2-207ENST00000468417 POLA1P09884 1462 aaPredicted RBP6.28□□□□□ -1.4
CBWD2-207ENST00000468417 ZNF608Q9ULD9 1512 aaPredicted RBP6.28□□□□□ -1.4
CBWD2-207ENST00000468417 PBRM1Q86U86 1689 aa6.27□□□□□ -1.41
CBWD2-207ENST00000468417 GRIN2BQ13224 1484 aa6.27□□□□□ -1.41
CBWD2-207ENST00000468417 ABCA10Q8WWZ4 1543 aa6.26□□□□□ -1.41
CBWD2-207ENST00000468417 NUP160Q12769 1436 aa6.24□□□□□ -1.41
CBWD2-207ENST00000468417 BIVM-ERCC5R4GMW8 1640 aa6.23□□□□□ -1.41
CBWD2-207ENST00000468417 MAPKBP1O60336 1514 aa6.23□□□□□ -1.41
CBWD2-207ENST00000468417 ERICH3Q5RHP9 1530 aa6.22□□□□□ -1.41
CBWD2-207ENST00000468417 ADAMTS12P58397 1594 aa6.21□□□□□ -1.41
CBWD2-207ENST00000468417 TRIM41Q8WV44 630 aa6.21□□□□□ -1.42
CBWD2-207ENST00000468417 SNAPC4Q5SXM2 1469 aa6.2□□□□□ -1.42
CBWD2-207ENST00000468417 CUX1P39880 1505 aa6.19□□□□□ -1.42
CBWD2-207ENST00000468417 KIF13AQ9H1H9 1805 aa6.19□□□□□ -1.42
CBWD2-207ENST00000468417 SOGA1O94964 1423 aa6.19□□□□□ -1.42
CBWD2-207ENST00000468417 FGD5Q6ZNL6 1462 aa6.18□□□□□ -1.42
CBWD2-207ENST00000468417 GAPVD1Q14C86 1478 aa6.18□□□□□ -1.42
CBWD2-207ENST00000468417 GLI2P10070 1586 aa6.17□□□□□ -1.42
CBWD2-207ENST00000468417 GRIN2AQ12879 1464 aa6.16□□□□□ -1.42
CBWD2-207ENST00000468417 TOP2BQ02880 1626 aa6.16□□□□□ -1.42
CBWD2-207ENST00000468417 CEP170Q5SW79 1584 aa6.16□□□□□ -1.42
CBWD2-207ENST00000468417 AQRO60306 1485 aaKnown RBP eCLIP6.15□□□□□ -1.42
CBWD2-207ENST00000468417 FHAD1B1AJZ9 1412 aa6.15□□□□□ -1.42
CBWD2-207ENST00000468417 ABCC10Q5T3U5 1492 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms