RNA–Protein interactions for RNA: ENST00000468401.1

HBP1-207, Transcript of HMG-box transcription factor 1, humanhuman

TSL 4

Gene HBP1, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBP1-207ENST00000468401 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
HBP1-207ENST00000468401 ABCC9O60706 1549 aa29.45■■■□□ 2.3
HBP1-207ENST00000468401 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
HBP1-207ENST00000468401 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
HBP1-207ENST00000468401 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
HBP1-207ENST00000468401 NACADO15069 1562 aa27.48■■□□□ 1.99
HBP1-207ENST00000468401 PABPN1Q86U42 306 aaKnown RBP eCLIP27.3■■□□□ 1.96
HBP1-207ENST00000468401 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
HBP1-207ENST00000468401 UNC13AQ9UPW8 1703 aa27.28■■□□□ 1.96
HBP1-207ENST00000468401 BICRAQ9NZM4 1560 aa27.02■■□□□ 1.92
HBP1-207ENST00000468401 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
HBP1-207ENST00000468401 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
HBP1-207ENST00000468401 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
HBP1-207ENST00000468401 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
HBP1-207ENST00000468401 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
HBP1-207ENST00000468401 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
HBP1-207ENST00000468401 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
HBP1-207ENST00000468401 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
HBP1-207ENST00000468401 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
HBP1-207ENST00000468401 CUX2O14529 1486 aa25.68■■□□□ 1.7
HBP1-207ENST00000468401 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
HBP1-207ENST00000468401 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
HBP1-207ENST00000468401 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
HBP1-207ENST00000468401 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
HBP1-207ENST00000468401 SMARCA2P51531 1590 aa25.17■■□□□ 1.62
HBP1-207ENST00000468401 HMGXB3Q12766 1538 aa25.15■■□□□ 1.62
HBP1-207ENST00000468401 NESP48681 1621 aa25.13■■□□□ 1.61
HBP1-207ENST00000468401 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
HBP1-207ENST00000468401 THOC2Q8NI27 1593 aaKnown RBP25.04■■□□□ 1.6
HBP1-207ENST00000468401 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
HBP1-207ENST00000468401 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
HBP1-207ENST00000468401 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
HBP1-207ENST00000468401 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
HBP1-207ENST00000468401 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
HBP1-207ENST00000468401 KIF21AQ7Z4S6 1674 aa24.82■■□□□ 1.56
HBP1-207ENST00000468401 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
HBP1-207ENST00000468401 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
HBP1-207ENST00000468401 WIZO95785 1651 aa24.69■■□□□ 1.54
HBP1-207ENST00000468401 RSF1Q96T23 1441 aaPredicted RBP24.64■■□□□ 1.54
HBP1-207ENST00000468401 MRC2Q9UBG0 1479 aa24.58■■□□□ 1.53
HBP1-207ENST00000468401 WDR62O43379 1518 aa24.56■■□□□ 1.52
HBP1-207ENST00000468401 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
HBP1-207ENST00000468401 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
HBP1-207ENST00000468401 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
HBP1-207ENST00000468401 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
HBP1-207ENST00000468401 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
HBP1-207ENST00000468401 CFTRP13569 1480 aa24.25■■□□□ 1.47
HBP1-207ENST00000468401 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
HBP1-207ENST00000468401 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.46
HBP1-207ENST00000468401 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.46
HBP1-207ENST00000468401 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.46
HBP1-207ENST00000468401 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
HBP1-207ENST00000468401 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
HBP1-207ENST00000468401 ARHGEF11O15085 1522 aa24■■□□□ 1.43
HBP1-207ENST00000468401 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
HBP1-207ENST00000468401 IFT140Q96RY7 1462 aa23.91■■□□□ 1.42
HBP1-207ENST00000468401 ZNF608Q9ULD9 1512 aaPredicted RBP23.9■■□□□ 1.42
HBP1-207ENST00000468401 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
HBP1-207ENST00000468401 CYB5RLQ6IPT4 315 aa23.82■■□□□ 1.4
HBP1-207ENST00000468401 EIF4G3O43432 1585 aaKnown RBP23.76■■□□□ 1.39
HBP1-207ENST00000468401 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
HBP1-207ENST00000468401 TRHP20396 242 aaPredicted RBP23.74■■□□□ 1.39
HBP1-207ENST00000468401 CHD1O14646 1710 aa23.72■■□□□ 1.39
HBP1-207ENST00000468401 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
HBP1-207ENST00000468401 ARAP1Q96P48 1450 aa23.71■■□□□ 1.39
HBP1-207ENST00000468401 TARBP1Q13395 1621 aaKnown RBP23.68■■□□□ 1.38
HBP1-207ENST00000468401 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.372e-14■■■■■ 60.9
HBP1-207ENST00000468401 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
HBP1-207ENST00000468401 FBLN2P98095 1184 aa23.54■■□□□ 1.36
HBP1-207ENST00000468401 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
HBP1-207ENST00000468401 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
HBP1-207ENST00000468401 SOGA1O94964 1423 aa23.44■■□□□ 1.34
HBP1-207ENST00000468401 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
HBP1-207ENST00000468401 TDRD9Q8NDG6 1382 aaKnown RBP23.43■■□□□ 1.34
HBP1-207ENST00000468401 CUX1P39880 1505 aa23.43■■□□□ 1.34
HBP1-207ENST00000468401 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
HBP1-207ENST00000468401 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
HBP1-207ENST00000468401 WDR97A6NE52 1622 aa23.36■■□□□ 1.33
HBP1-207ENST00000468401 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
HBP1-207ENST00000468401 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
HBP1-207ENST00000468401 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
HBP1-207ENST00000468401 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
HBP1-207ENST00000468401 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
HBP1-207ENST00000468401 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
HBP1-207ENST00000468401 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
HBP1-207ENST00000468401 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.35e-6■■■■■ 29.2
HBP1-207ENST00000468401 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
HBP1-207ENST00000468401 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
HBP1-207ENST00000468401 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
HBP1-207ENST00000468401 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
HBP1-207ENST00000468401 EEA1Q15075 1411 aa23.03■■□□□ 1.28
HBP1-207ENST00000468401 ADAMTS12P58397 1594 aa22.99■■□□□ 1.27
HBP1-207ENST00000468401 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
HBP1-207ENST00000468401 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
HBP1-207ENST00000468401 CEP170Q5SW79 1584 aa22.96■■□□□ 1.27
HBP1-207ENST00000468401 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
HBP1-207ENST00000468401 NUP160Q12769 1436 aa22.89■■□□□ 1.25
HBP1-207ENST00000468401 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
HBP1-207ENST00000468401 LOC105371045A0A1W2PR82 267 aa22.86■■□□□ 1.25
HBP1-207ENST00000468401 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms