RNA–Protein interactions for RNA: ENST00000468104.5

PBX1-206, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,818 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-206ENST00000468104 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
PBX1-206ENST00000468104 CCDC180Q9P1Z9 1646 aa37.92■■■■□ 3.66
PBX1-206ENST00000468104 ABCC9O60706 1549 aa36.79■■■■□ 3.48
PBX1-206ENST00000468104 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
PBX1-206ENST00000468104 NACADO15069 1562 aa35.57■■■■□ 3.28
PBX1-206ENST00000468104 RB1CC1Q8TDY2 1594 aa35.54■■■■□ 3.28
PBX1-206ENST00000468104 DCAF8L2P0C7V8 631 aa35.5■■■■□ 3.27
PBX1-206ENST00000468104 MYO15BQ96JP2 1530 aa35.44■■■■□ 3.26
PBX1-206ENST00000468104 DCAF1Q9Y4B6 1507 aa35.39■■■■□ 3.26
PBX1-206ENST00000468104 UNC13AQ9UPW8 1703 aa34.74■■■■□ 3.15
PBX1-206ENST00000468104 SCRIBQ14160 1630 aa34.58■■■■□ 3.13
PBX1-206ENST00000468104 BICRAQ9NZM4 1560 aa34.44■■■■□ 3.1
PBX1-206ENST00000468104 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
PBX1-206ENST00000468104 SHROOM4Q9ULL8 1493 aa34.14■■■■□ 3.06
PBX1-206ENST00000468104 EIF4G1Q04637 1599 aaKnown RBP33.52■■■□□ 2.96
PBX1-206ENST00000468104 SUPT5HO00267 1087 aaKnown RBP33.49■■■□□ 2.95
PBX1-206ENST00000468104 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
PBX1-206ENST00000468104 CC2D2AQ9P2K1 1620 aa33.31■■■□□ 2.92
PBX1-206ENST00000468104 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
PBX1-206ENST00000468104 SMARCA4P51532 1647 aa33.11■■■□□ 2.89
PBX1-206ENST00000468104 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
PBX1-206ENST00000468104 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
PBX1-206ENST00000468104 HRCP23327 699 aa33■■■□□ 2.87
PBX1-206ENST00000468104 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
PBX1-206ENST00000468104 ATAD2BQ9ULI0 1458 aa32.85■■■□□ 2.85
PBX1-206ENST00000468104 SMARCA2P51531 1590 aa32.85■■■□□ 2.85
PBX1-206ENST00000468104 PEG3Q9GZU2 1588 aa32.8■■■□□ 2.84
PBX1-206ENST00000468104 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
PBX1-206ENST00000468104 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
PBX1-206ENST00000468104 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
PBX1-206ENST00000468104 BAZ1BQ9UIG0 1483 aaKnown RBP32.6■■■□□ 2.81
PBX1-206ENST00000468104 WIZO95785 1651 aa32.59■■■□□ 2.81
PBX1-206ENST00000468104 PCGF6Q9BYE7 350 aa32.35■■■□□ 2.77
PBX1-206ENST00000468104 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
PBX1-206ENST00000468104 TRIM26Q12899 539 aaPredicted RBP31.98■■■□□ 2.71
PBX1-206ENST00000468104 LAMC3Q9Y6N6 1575 aa31.91■■■□□ 2.7
PBX1-206ENST00000468104 NESP48681 1621 aa31.91■■■□□ 2.7
PBX1-206ENST00000468104 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
PBX1-206ENST00000468104 CADPSQ9ULU8 1353 aa31.83■■■□□ 2.69
PBX1-206ENST00000468104 LOC105371045A0A1W2PR82 267 aa31.79■■■□□ 2.68
PBX1-206ENST00000468104 ZEB1P37275 1124 aaPredicted RBP31.78■■■□□ 2.68
PBX1-206ENST00000468104 PPARGC1BQ86YN6 1023 aaKnown RBP31.72■■■□□ 2.67
PBX1-206ENST00000468104 CFTRP13569 1480 aa31.72■■■□□ 2.67
PBX1-206ENST00000468104 ERCC6Q03468 1493 aa31.7■■■□□ 2.67
PBX1-206ENST00000468104 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
PBX1-206ENST00000468104 KIF21AQ7Z4S6 1674 aa31.58■■■□□ 2.65
PBX1-206ENST00000468104 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
PBX1-206ENST00000468104 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
PBX1-206ENST00000468104 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
PBX1-206ENST00000468104 THOC2Q8NI27 1593 aaKnown RBP31.42■■■□□ 2.62
PBX1-206ENST00000468104 TRIM41Q8WV44 630 aa31.41■■■□□ 2.62
PBX1-206ENST00000468104 MRC2Q9UBG0 1479 aa31.34■■■□□ 2.61
PBX1-206ENST00000468104 CUX2O14529 1486 aa31.29■■■□□ 2.6
PBX1-206ENST00000468104 WDR62O43379 1518 aa31.24■■■□□ 2.59
PBX1-206ENST00000468104 URB2Q14146 1524 aaKnown RBP31.16■■■□□ 2.58
PBX1-206ENST00000468104 PELP1Q8IZL8 1130 aaKnown RBP31.15■■■□□ 2.58
PBX1-206ENST00000468104 ABCC8Q09428 1581 aa31.04■■■□□ 2.56
PBX1-206ENST00000468104 TOPBP1Q92547 1522 aa31.02■■■□□ 2.56
PBX1-206ENST00000468104 DNMBPQ6XZF7 1577 aa31.02■■■□□ 2.56
PBX1-206ENST00000468104 CUX1P39880 1505 aa30.88■■■□□ 2.53
PBX1-206ENST00000468104 FAM9AQ8IZU1 332 aaPredicted RBP30.8■■■□□ 2.52
PBX1-206ENST00000468104 POLA1P09884 1462 aaPredicted RBP30.77■■■□□ 2.52
PBX1-206ENST00000468104 IFT140Q96RY7 1462 aa30.77■■■□□ 2.52
PBX1-206ENST00000468104 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.529e-6■■■■■ 50.1
PBX1-206ENST00000468104 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
PBX1-206ENST00000468104 BIVM-ERCC5R4GMW8 1640 aa30.71■■■□□ 2.51
PBX1-206ENST00000468104 TOP2BQ02880 1626 aa30.7■■■□□ 2.5
PBX1-206ENST00000468104 SYNJ1O43426 1573 aa30.69■■■□□ 2.5
PBX1-206ENST00000468104 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
PBX1-206ENST00000468104 SOGA1O94964 1423 aa30.63■■■□□ 2.49
PBX1-206ENST00000468104 RAD54L2Q9Y4B4 1467 aa30.61■■■□□ 2.49
PBX1-206ENST00000468104 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
PBX1-206ENST00000468104 EIF4G3O43432 1585 aaKnown RBP30.51■■■□□ 2.47
PBX1-206ENST00000468104 WDR97A6NE52 1622 aa30.5■■■□□ 2.47
PBX1-206ENST00000468104 SCAF1Q9H7N4 1312 aaKnown RBP30.5■■■□□ 2.47
PBX1-206ENST00000468104 EEA1Q15075 1411 aa30.48■■■□□ 2.47
PBX1-206ENST00000468104 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
PBX1-206ENST00000468104 AQRO60306 1485 aaKnown RBP eCLIP30.42■■■□□ 2.46
PBX1-206ENST00000468104 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
PBX1-206ENST00000468104 CCER1Q8TC90 406 aaPredicted RBP30.37■■■□□ 2.45
PBX1-206ENST00000468104 TNIKQ9UKE5 1360 aa30.34■■■□□ 2.45
PBX1-206ENST00000468104 ABCA5Q8WWZ7 1642 aa30.34■■■□□ 2.45
PBX1-206ENST00000468104 GAPVD1Q14C86 1478 aa30.29■■■□□ 2.44
PBX1-206ENST00000468104 CEP162Q5TB80 1403 aa30.27■■■□□ 2.44
PBX1-206ENST00000468104 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
PBX1-206ENST00000468104 ACIN1Q9UKV3 1341 aaKnown RBP30.26■■■□□ 2.43
PBX1-206ENST00000468104 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
PBX1-206ENST00000468104 EHMT2Q96KQ7 1210 aa30.23■■■□□ 2.43
PBX1-206ENST00000468104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.22■■■□□ 2.43
PBX1-206ENST00000468104 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
PBX1-206ENST00000468104 CENPBP07199 599 aaPredicted RBP30.19■■■□□ 2.42
PBX1-206ENST00000468104 MAGI1Q96QZ7 1491 aaPredicted RBP30.17■■■□□ 2.42
PBX1-206ENST00000468104 KIF27Q86VH2 1401 aa30.11■■■□□ 2.41
PBX1-206ENST00000468104 ERICH3Q5RHP9 1530 aa30.1■■■□□ 2.41
PBX1-206ENST00000468104 DIEXFQ68CQ4 756 aaKnown RBP30.1■■■□□ 2.41
PBX1-206ENST00000468104 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
PBX1-206ENST00000468104 CHD1O14646 1710 aa30.07■■■□□ 2.4
PBX1-206ENST00000468104 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
PBX1-206ENST00000468104 CSRNP3Q8WYN3 585 aa30.03■■■□□ 2.4
PBX1-206ENST00000468104 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms