RNA–Protein interactions for RNA: ENST00000468088.2

NVL-209, Transcript of nuclear VCP-like, humanhuman

TSL 5

Gene NVL, Length 248 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-209ENST00000468088 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
NVL-209ENST00000468088 ABCC9O60706 1549 aa23.84■■□□□ 1.41
NVL-209ENST00000468088 CCDC180Q9P1Z9 1646 aa23.67■■□□□ 1.38
NVL-209ENST00000468088 RB1CC1Q8TDY2 1594 aa22.66■■□□□ 1.22
NVL-209ENST00000468088 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
NVL-209ENST00000468088 NACADO15069 1562 aa22.49■■□□□ 1.19
NVL-209ENST00000468088 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
NVL-209ENST00000468088 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
NVL-209ENST00000468088 MYO15BQ96JP2 1530 aa22.17■■□□□ 1.14
NVL-209ENST00000468088 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
NVL-209ENST00000468088 BICRAQ9NZM4 1560 aa21.93■■□□□ 1.1
NVL-209ENST00000468088 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
NVL-209ENST00000468088 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
NVL-209ENST00000468088 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
NVL-209ENST00000468088 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
NVL-209ENST00000468088 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
NVL-209ENST00000468088 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
NVL-209ENST00000468088 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
NVL-209ENST00000468088 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
NVL-209ENST00000468088 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
NVL-209ENST00000468088 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
NVL-209ENST00000468088 CUX2O14529 1486 aa20.67■□□□□ 0.9
NVL-209ENST00000468088 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
NVL-209ENST00000468088 SMARCA2P51531 1590 aa20.62■□□□□ 0.89
NVL-209ENST00000468088 HMGXB3Q12766 1538 aa20.58■□□□□ 0.88
NVL-209ENST00000468088 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
NVL-209ENST00000468088 BAZ1AQ9NRL2 1556 aaPredicted RBP20.5■□□□□ 0.87
NVL-209ENST00000468088 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
NVL-209ENST00000468088 NESP48681 1621 aa20.41■□□□□ 0.86
NVL-209ENST00000468088 PEG3Q9GZU2 1588 aa20.39■□□□□ 0.85
NVL-209ENST00000468088 LAMC3Q9Y6N6 1575 aa20.29■□□□□ 0.84
NVL-209ENST00000468088 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
NVL-209ENST00000468088 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.83
NVL-209ENST00000468088 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
NVL-209ENST00000468088 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
NVL-209ENST00000468088 KIF21AQ7Z4S6 1674 aa20.07■□□□□ 0.8
NVL-209ENST00000468088 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
NVL-209ENST00000468088 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
NVL-209ENST00000468088 WIZO95785 1651 aa19.99■□□□□ 0.79
NVL-209ENST00000468088 WDR62O43379 1518 aa19.96■□□□□ 0.79
NVL-209ENST00000468088 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
NVL-209ENST00000468088 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.77
NVL-209ENST00000468088 CFTRP13569 1480 aa19.87■□□□□ 0.77
NVL-209ENST00000468088 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
NVL-209ENST00000468088 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
NVL-209ENST00000468088 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
NVL-209ENST00000468088 OSCARQ8IYS5 282 aa19.77■□□□□ 0.76
NVL-209ENST00000468088 URB2Q14146 1524 aaKnown RBP19.7■□□□□ 0.74
NVL-209ENST00000468088 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
NVL-209ENST00000468088 IFT140Q96RY7 1462 aa19.55■□□□□ 0.72
NVL-209ENST00000468088 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
NVL-209ENST00000468088 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
NVL-209ENST00000468088 TOPBP1Q92547 1522 aa19.48■□□□□ 0.71
NVL-209ENST00000468088 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
NVL-209ENST00000468088 DNMBPQ6XZF7 1577 aa19.39■□□□□ 0.69
NVL-209ENST00000468088 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
NVL-209ENST00000468088 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
NVL-209ENST00000468088 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
NVL-209ENST00000468088 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
NVL-209ENST00000468088 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
NVL-209ENST00000468088 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.689e-10■■■■■ 41.2
NVL-209ENST00000468088 FBLN2P98095 1184 aa19.28■□□□□ 0.68
NVL-209ENST00000468088 POLA1P09884 1462 aaPredicted RBP19.28■□□□□ 0.68
NVL-209ENST00000468088 TARBP1Q13395 1621 aaKnown RBP19.27■□□□□ 0.68
NVL-209ENST00000468088 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
NVL-209ENST00000468088 SOGA1O94964 1423 aa19.24■□□□□ 0.67
NVL-209ENST00000468088 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
NVL-209ENST00000468088 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
NVL-209ENST00000468088 CHD1O14646 1710 aa19.16■□□□□ 0.66
NVL-209ENST00000468088 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
NVL-209ENST00000468088 WDR97A6NE52 1622 aa19.14■□□□□ 0.65
NVL-209ENST00000468088 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
NVL-209ENST00000468088 FGD5Q6ZNL6 1462 aa19.12■□□□□ 0.65
NVL-209ENST00000468088 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
NVL-209ENST00000468088 SNAPC4Q5SXM2 1469 aa19.09■□□□□ 0.65
NVL-209ENST00000468088 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
NVL-209ENST00000468088 GRIN2BQ13224 1484 aa19.08■□□□□ 0.64
NVL-209ENST00000468088 CUX1P39880 1505 aa19.06■□□□□ 0.64
NVL-209ENST00000468088 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
NVL-209ENST00000468088 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
NVL-209ENST00000468088 CLASP1Q7Z460 1538 aa19.01■□□□□ 0.63
NVL-209ENST00000468088 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
NVL-209ENST00000468088 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
NVL-209ENST00000468088 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
NVL-209ENST00000468088 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
NVL-209ENST00000468088 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
NVL-209ENST00000468088 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
NVL-209ENST00000468088 ABCA5Q8WWZ7 1642 aa18.84■□□□□ 0.61
NVL-209ENST00000468088 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
NVL-209ENST00000468088 FHAD1B1AJZ9 1412 aa18.75■□□□□ 0.59
NVL-209ENST00000468088 NUP160Q12769 1436 aa18.75■□□□□ 0.59
NVL-209ENST00000468088 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
NVL-209ENST00000468088 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
NVL-209ENST00000468088 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
NVL-209ENST00000468088 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
NVL-209ENST00000468088 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
NVL-209ENST00000468088 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
NVL-209ENST00000468088 JPH4Q96JJ6 628 aa18.63■□□□□ 0.57
NVL-209ENST00000468088 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
NVL-209ENST00000468088 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms