RNA–Protein interactions for RNA: ENST00000467882.5

NVL-208, Transcript of nuclear VCP-like, humanhuman

TSL 5

Gene NVL, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-208ENST00000467882 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
NVL-208ENST00000467882 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
NVL-208ENST00000467882 ABCC9O60706 1549 aa22.74■■□□□ 1.23
NVL-208ENST00000467882 RB1CC1Q8TDY2 1594 aa21.86■■□□□ 1.09
NVL-208ENST00000467882 NACADO15069 1562 aa21.82■■□□□ 1.08
NVL-208ENST00000467882 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
NVL-208ENST00000467882 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
NVL-208ENST00000467882 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
NVL-208ENST00000467882 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
NVL-208ENST00000467882 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
NVL-208ENST00000467882 BICRAQ9NZM4 1560 aa21.29■■□□□ 1
NVL-208ENST00000467882 PABPN1Q86U42 306 aaKnown RBP eCLIP21.2■□□□□ 0.98
NVL-208ENST00000467882 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
NVL-208ENST00000467882 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
NVL-208ENST00000467882 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
NVL-208ENST00000467882 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
NVL-208ENST00000467882 CC2D2AQ9P2K1 1620 aa20.62■□□□□ 0.89
NVL-208ENST00000467882 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
NVL-208ENST00000467882 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
NVL-208ENST00000467882 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
NVL-208ENST00000467882 BAZ1AQ9NRL2 1556 aaPredicted RBP20.19■□□□□ 0.82
NVL-208ENST00000467882 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
NVL-208ENST00000467882 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
NVL-208ENST00000467882 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
NVL-208ENST00000467882 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
NVL-208ENST00000467882 PEG3Q9GZU2 1588 aa20.09■□□□□ 0.81
NVL-208ENST00000467882 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
NVL-208ENST00000467882 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
NVL-208ENST00000467882 WIZO95785 1651 aa19.92■□□□□ 0.78
NVL-208ENST00000467882 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.76
NVL-208ENST00000467882 NESP48681 1621 aa19.7■□□□□ 0.74
NVL-208ENST00000467882 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
NVL-208ENST00000467882 LAMC3Q9Y6N6 1575 aa19.63■□□□□ 0.73
NVL-208ENST00000467882 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
NVL-208ENST00000467882 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
NVL-208ENST00000467882 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
NVL-208ENST00000467882 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
NVL-208ENST00000467882 CCDC88BA6NC98 1476 aa19.42■□□□□ 0.7
NVL-208ENST00000467882 PDS5BQ9NTI5 1447 aa19.41■□□□□ 0.7
NVL-208ENST00000467882 CFTRP13569 1480 aa19.41■□□□□ 0.7
NVL-208ENST00000467882 CUX2O14529 1486 aa19.41■□□□□ 0.7
NVL-208ENST00000467882 PRDM2Q13029 1718 aa19.39■□□□□ 0.69
NVL-208ENST00000467882 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
NVL-208ENST00000467882 FANCD2Q9BXW9 1451 aa19.29■□□□□ 0.68
NVL-208ENST00000467882 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
NVL-208ENST00000467882 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
NVL-208ENST00000467882 WDR62O43379 1518 aa19.24■□□□□ 0.67
NVL-208ENST00000467882 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
NVL-208ENST00000467882 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
NVL-208ENST00000467882 TOPBP1Q92547 1522 aa19■□□□□ 0.63
NVL-208ENST00000467882 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
NVL-208ENST00000467882 ABCC8Q09428 1581 aa18.96■□□□□ 0.63
NVL-208ENST00000467882 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
NVL-208ENST00000467882 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
NVL-208ENST00000467882 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
NVL-208ENST00000467882 CUX1P39880 1505 aa18.86■□□□□ 0.61
NVL-208ENST00000467882 POLA1P09884 1462 aaPredicted RBP18.84■□□□□ 0.61
NVL-208ENST00000467882 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.61
NVL-208ENST00000467882 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
NVL-208ENST00000467882 EIF4G3O43432 1585 aaKnown RBP18.77■□□□□ 0.6
NVL-208ENST00000467882 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
NVL-208ENST00000467882 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
NVL-208ENST00000467882 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
NVL-208ENST00000467882 SOGA1O94964 1423 aa18.72■□□□□ 0.59
NVL-208ENST00000467882 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.583e-7■■■■■ 28.9
NVL-208ENST00000467882 SYNJ1O43426 1573 aa18.7■□□□□ 0.58
NVL-208ENST00000467882 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
NVL-208ENST00000467882 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
NVL-208ENST00000467882 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
NVL-208ENST00000467882 CHD1O14646 1710 aa18.61■□□□□ 0.57
NVL-208ENST00000467882 ABCA10Q8WWZ4 1543 aa18.6■□□□□ 0.57
NVL-208ENST00000467882 PBRM1Q86U86 1689 aa18.58■□□□□ 0.57
NVL-208ENST00000467882 ABCA5Q8WWZ7 1642 aa18.58■□□□□ 0.57
NVL-208ENST00000467882 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
NVL-208ENST00000467882 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.55
NVL-208ENST00000467882 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
NVL-208ENST00000467882 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
NVL-208ENST00000467882 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
NVL-208ENST00000467882 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
NVL-208ENST00000467882 FBLN2P98095 1184 aa18.38■□□□□ 0.53
NVL-208ENST00000467882 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
NVL-208ENST00000467882 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
NVL-208ENST00000467882 RIMBP3CA6NJZ7 1639 aa18.36■□□□□ 0.53
NVL-208ENST00000467882 RIMBP3BA6NNM3 1639 aa18.36■□□□□ 0.53
NVL-208ENST00000467882 RIMBP3Q9UFD9 1639 aa18.36■□□□□ 0.53
NVL-208ENST00000467882 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
NVL-208ENST00000467882 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
NVL-208ENST00000467882 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
NVL-208ENST00000467882 GRIN2AQ12879 1464 aa18.29■□□□□ 0.52
NVL-208ENST00000467882 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
NVL-208ENST00000467882 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
NVL-208ENST00000467882 KIF27Q86VH2 1401 aa18.24■□□□□ 0.51
NVL-208ENST00000467882 IGF1RP08069 1367 aa18.23■□□□□ 0.51
NVL-208ENST00000467882 NUP160Q12769 1436 aa18.23■□□□□ 0.51
NVL-208ENST00000467882 CUL7Q14999 1698 aa18.21■□□□□ 0.51
NVL-208ENST00000467882 TRIM41Q8WV44 630 aa18.17■□□□□ 0.5
NVL-208ENST00000467882 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
NVL-208ENST00000467882 RUSC2Q8N2Y8 1516 aa18.17■□□□□ 0.5
NVL-208ENST00000467882 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
NVL-208ENST00000467882 ERCC6L2Q5T890 1561 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms