RNA–Protein interactions for RNA: ENST00000467778.5

PAX8-207, Transcript of paired box 8, humanhuman

TSL 2

Gene PAX8, Length 1,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-207ENST00000467778 NISCHQ9Y2I1 1504 aa48.74■■■■■ 5.39
PAX8-207ENST00000467778 CCDC180Q9P1Z9 1646 aa42.96■■■■■ 4.47
PAX8-207ENST00000467778 ABCC9O60706 1549 aa40.96■■■■■ 4.15
PAX8-207ENST00000467778 ZCCHC6Q5VYS8 1495 aaKnown RBP40.84■■■■■ 4.13
PAX8-207ENST00000467778 DCAF1Q9Y4B6 1507 aa40.46■■■■■ 4.07
PAX8-207ENST00000467778 MYO15BQ96JP2 1530 aa40.28■■■■■ 4.04
PAX8-207ENST00000467778 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
PAX8-207ENST00000467778 NACADO15069 1562 aa40.13■■■■■ 4.02
PAX8-207ENST00000467778 RB1CC1Q8TDY2 1594 aa39.92■■■■□ 3.98
PAX8-207ENST00000467778 SCRIBQ14160 1630 aa39.18■■■■□ 3.86
PAX8-207ENST00000467778 UNC13AQ9UPW8 1703 aa39.01■■■■□ 3.83
PAX8-207ENST00000467778 SHROOM4Q9ULL8 1493 aa38.96■■■■□ 3.83
PAX8-207ENST00000467778 BICRAQ9NZM4 1560 aa38.66■■■■□ 3.78
PAX8-207ENST00000467778 PABPN1Q86U42 306 aaKnown RBP eCLIP38.38■■■■□ 3.74
PAX8-207ENST00000467778 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
PAX8-207ENST00000467778 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
PAX8-207ENST00000467778 SMARCA4P51532 1647 aa37.62■■■■□ 3.61
PAX8-207ENST00000467778 EIF4G1Q04637 1599 aaKnown RBP37.56■■■■□ 3.6
PAX8-207ENST00000467778 MROH2BQ7Z745 1585 aa37.55■■■■□ 3.6
PAX8-207ENST00000467778 RSF1Q96T23 1441 aaPredicted RBP37.49■■■■□ 3.59
PAX8-207ENST00000467778 PEG3Q9GZU2 1588 aa37.29■■■■□ 3.56
PAX8-207ENST00000467778 WIZO95785 1651 aa37.19■■■■□ 3.54
PAX8-207ENST00000467778 SMARCA2P51531 1590 aa37.19■■■■□ 3.54
PAX8-207ENST00000467778 SUPT5HO00267 1087 aaKnown RBP37.16■■■■□ 3.54
PAX8-207ENST00000467778 ATAD2BQ9ULI0 1458 aa37.15■■■■□ 3.54
PAX8-207ENST00000467778 CC2D2AQ9P2K1 1620 aa37.14■■■■□ 3.54
PAX8-207ENST00000467778 NCAPD3P42695 1498 aa37.01■■■■□ 3.51
PAX8-207ENST00000467778 HMGXB3Q12766 1538 aa36.95■■■■□ 3.51
PAX8-207ENST00000467778 TOP2AP11388 1531 aaKnown RBP36.91■■■■□ 3.5
PAX8-207ENST00000467778 BAZ1BQ9UIG0 1483 aaKnown RBP36.89■■■■□ 3.5
PAX8-207ENST00000467778 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
PAX8-207ENST00000467778 CCDC88BA6NC98 1476 aa36.42■■■■□ 3.42
PAX8-207ENST00000467778 CFTRP13569 1480 aa35.97■■■■□ 3.35
PAX8-207ENST00000467778 CADPSQ9ULU8 1353 aa35.95■■■■□ 3.35
PAX8-207ENST00000467778 LAMC3Q9Y6N6 1575 aa35.88■■■■□ 3.33
PAX8-207ENST00000467778 PRDM2Q13029 1718 aa35.82■■■■□ 3.32
PAX8-207ENST00000467778 NESP48681 1621 aa35.73■■■■□ 3.31
PAX8-207ENST00000467778 PDS5BQ9NTI5 1447 aa35.58■■■■□ 3.29
PAX8-207ENST00000467778 FANCD2Q9BXW9 1451 aa35.53■■■■□ 3.28
PAX8-207ENST00000467778 CEP164Q9UPV0 1460 aa35.41■■■■□ 3.26
PAX8-207ENST00000467778 KIF21AQ7Z4S6 1674 aa35.38■■■■□ 3.25
PAX8-207ENST00000467778 ABCC8Q09428 1581 aa35.36■■■■□ 3.25
PAX8-207ENST00000467778 CHIC1Q5VXU3 224 aa35.32■■■■□ 3.25
PAX8-207ENST00000467778 WRNQ14191 1432 aaPredicted RBP eCLIP35.32■■■■□ 3.24
PAX8-207ENST00000467778 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
PAX8-207ENST00000467778 CUX1P39880 1505 aa35.18■■■■□ 3.22
PAX8-207ENST00000467778 SYNJ1O43426 1573 aa35.18■■■■□ 3.22
PAX8-207ENST00000467778 TOP2BQ02880 1626 aa35.17■■■■□ 3.22
PAX8-207ENST00000467778 BIVM-ERCC5R4GMW8 1640 aa35.17■■■■□ 3.22
PAX8-207ENST00000467778 MRC2Q9UBG0 1479 aa35.16■■■■□ 3.22
PAX8-207ENST00000467778 DNMBPQ6XZF7 1577 aa35.16■■■■□ 3.22
PAX8-207ENST00000467778 URB2Q14146 1524 aaKnown RBP35.11■■■■□ 3.21
PAX8-207ENST00000467778 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
PAX8-207ENST00000467778 TOPBP1Q92547 1522 aa35.08■■■■□ 3.21
PAX8-207ENST00000467778 THOC2Q8NI27 1593 aaKnown RBP35.06■■■■□ 3.2
PAX8-207ENST00000467778 WDR62O43379 1518 aa35.03■■■■□ 3.2
PAX8-207ENST00000467778 FGD5Q6ZNL6 1462 aa34.9■■■■□ 3.18
PAX8-207ENST00000467778 POLA1P09884 1462 aaPredicted RBP34.86■■■■□ 3.17
PAX8-207ENST00000467778 SOGA1O94964 1423 aa34.7■■■■□ 3.14
PAX8-207ENST00000467778 CUX2O14529 1486 aa34.69■■■■□ 3.14
PAX8-207ENST00000467778 ABCA10Q8WWZ4 1543 aa34.65■■■■□ 3.14
PAX8-207ENST00000467778 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
PAX8-207ENST00000467778 RAD54L2Q9Y4B4 1467 aa34.64■■■■□ 3.14
PAX8-207ENST00000467778 TARBP1Q13395 1621 aaKnown RBP34.64■■■■□ 3.14
PAX8-207ENST00000467778 WDR97A6NE52 1622 aa34.62■■■■□ 3.13
PAX8-207ENST00000467778 EEA1Q15075 1411 aa34.57■■■■□ 3.12
PAX8-207ENST00000467778 KIF27Q86VH2 1401 aa34.52■■■■□ 3.12
PAX8-207ENST00000467778 ABCA5Q8WWZ7 1642 aa34.43■■■■□ 3.1
PAX8-207ENST00000467778 RUSC2Q8N2Y8 1516 aa34.43■■■■□ 3.1
PAX8-207ENST00000467778 TDRD9Q8NDG6 1382 aaKnown RBP34.35■■■■□ 3.09
PAX8-207ENST00000467778 GAPVD1Q14C86 1478 aa34.34■■■■□ 3.09
PAX8-207ENST00000467778 ZNF608Q9ULD9 1512 aaPredicted RBP34.34■■■■□ 3.09
PAX8-207ENST00000467778 EIF4G3O43432 1585 aaKnown RBP34.3■■■■□ 3.08
PAX8-207ENST00000467778 FAM9AQ8IZU1 332 aaPredicted RBP34.28■■■■□ 3.08
PAX8-207ENST00000467778 CSRNP3Q8WYN3 585 aa34.28■■■■□ 3.08
PAX8-207ENST00000467778 ERICH3Q5RHP9 1530 aa34.27■■■■□ 3.08
PAX8-207ENST00000467778 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.07
PAX8-207ENST00000467778 IGF1RP08069 1367 aa34.22■■■■□ 3.07
PAX8-207ENST00000467778 PBRM1Q86U86 1689 aa34.22■■■■□ 3.07
PAX8-207ENST00000467778 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
PAX8-207ENST00000467778 CUL7Q14999 1698 aa34.16■■■■□ 3.06
PAX8-207ENST00000467778 KIF21BO75037 1637 aa34.13■■■■□ 3.05
PAX8-207ENST00000467778 PRXQ9BXM0 1461 aa34.12■■■■□ 3.05
PAX8-207ENST00000467778 CARMIL1Q5VZK9 1371 aa34.05■■■■□ 3.04
PAX8-207ENST00000467778 MAGI1Q96QZ7 1491 aaPredicted RBP34.05■■■■□ 3.04
PAX8-207ENST00000467778 ADAMTS12P58397 1594 aa34.03■■■■□ 3.04
PAX8-207ENST00000467778 SNAPC4Q5SXM2 1469 aa34.01■■■■□ 3.03
PAX8-207ENST00000467778 FHAD1B1AJZ9 1412 aa34■■■■□ 3.03
PAX8-207ENST00000467778 GOLGA3Q08378 1498 aa33.98■■■■□ 3.03
PAX8-207ENST00000467778 RAPGEF2Q9Y4G8 1499 aa33.98■■■■□ 3.03
PAX8-207ENST00000467778 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
PAX8-207ENST00000467778 LOC105371045A0A1W2PR82 267 aa33.79■■■■□ 3
PAX8-207ENST00000467778 GRIN2AQ12879 1464 aa33.78■■■■□ 3
PAX8-207ENST00000467778 TNIKQ9UKE5 1360 aa33.72■■■□□ 2.99
PAX8-207ENST00000467778 CHMP7Q8WUX9 453 aaPredicted RBP33.7■■■□□ 2.99
PAX8-207ENST00000467778 UBTFP17480 764 aaKnown RBP33.69■■■□□ 2.98
PAX8-207ENST00000467778 EHMT2Q96KQ7 1210 aa33.68■■■□□ 2.98
PAX8-207ENST00000467778 CHD1O14646 1710 aa33.66■■■□□ 2.98
PAX8-207ENST00000467778 CTTNBP2Q8WZ74 1663 aa33.63■■■□□ 2.97
PAX8-207ENST00000467778 NUP160Q12769 1436 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms