RNA–Protein interactions for RNA: ENST00000467685.1

ABCC4-202, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 3

Gene ABCC4, Length 697 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-202ENST00000467685 NISCHQ9Y2I1 1504 aa26.2■■□□□ 1.79
ABCC4-202ENST00000467685 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
ABCC4-202ENST00000467685 ABCC9O60706 1549 aa23.07■■□□□ 1.28
ABCC4-202ENST00000467685 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
ABCC4-202ENST00000467685 NACADO15069 1562 aa22.11■■□□□ 1.13
ABCC4-202ENST00000467685 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
ABCC4-202ENST00000467685 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
ABCC4-202ENST00000467685 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
ABCC4-202ENST00000467685 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
ABCC4-202ENST00000467685 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
ABCC4-202ENST00000467685 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
ABCC4-202ENST00000467685 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
ABCC4-202ENST00000467685 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
ABCC4-202ENST00000467685 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
ABCC4-202ENST00000467685 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
ABCC4-202ENST00000467685 SCRIBQ14160 1630 aa21.29■■□□□ 1
ABCC4-202ENST00000467685 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
ABCC4-202ENST00000467685 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.94
ABCC4-202ENST00000467685 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
ABCC4-202ENST00000467685 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
ABCC4-202ENST00000467685 NCAPD3P42695 1498 aa20.37■□□□□ 0.85
ABCC4-202ENST00000467685 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
ABCC4-202ENST00000467685 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
ABCC4-202ENST00000467685 ATAD2BQ9ULI0 1458 aa20.31■□□□□ 0.84
ABCC4-202ENST00000467685 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
ABCC4-202ENST00000467685 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
ABCC4-202ENST00000467685 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
ABCC4-202ENST00000467685 MROH2BQ7Z745 1585 aa20.14■□□□□ 0.81
ABCC4-202ENST00000467685 CHIC1Q5VXU3 224 aa19.98■□□□□ 0.79
ABCC4-202ENST00000467685 ERCC6Q03468 1493 aa19.95■□□□□ 0.78
ABCC4-202ENST00000467685 WIZO95785 1651 aa19.93■□□□□ 0.78
ABCC4-202ENST00000467685 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
ABCC4-202ENST00000467685 NESP48681 1621 aa19.87■□□□□ 0.77
ABCC4-202ENST00000467685 CUX2O14529 1486 aa19.86■□□□□ 0.77
ABCC4-202ENST00000467685 RSF1Q96T23 1441 aaPredicted RBP19.85■□□□□ 0.77
ABCC4-202ENST00000467685 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.76
ABCC4-202ENST00000467685 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
ABCC4-202ENST00000467685 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
ABCC4-202ENST00000467685 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
ABCC4-202ENST00000467685 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
ABCC4-202ENST00000467685 CFTRP13569 1480 aa19.59■□□□□ 0.73
ABCC4-202ENST00000467685 MRC2Q9UBG0 1479 aa19.54■□□□□ 0.72
ABCC4-202ENST00000467685 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
ABCC4-202ENST00000467685 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
ABCC4-202ENST00000467685 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
ABCC4-202ENST00000467685 WDR62O43379 1518 aa19.49■□□□□ 0.71
ABCC4-202ENST00000467685 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
ABCC4-202ENST00000467685 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
ABCC4-202ENST00000467685 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
ABCC4-202ENST00000467685 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
ABCC4-202ENST00000467685 TOPBP1Q92547 1522 aa19.18■□□□□ 0.66
ABCC4-202ENST00000467685 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
ABCC4-202ENST00000467685 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
ABCC4-202ENST00000467685 IFT140Q96RY7 1462 aa19.15■□□□□ 0.66
ABCC4-202ENST00000467685 OSCARQ8IYS5 282 aa19■□□□□ 0.63
ABCC4-202ENST00000467685 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
ABCC4-202ENST00000467685 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
ABCC4-202ENST00000467685 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
ABCC4-202ENST00000467685 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
ABCC4-202ENST00000467685 SOGA1O94964 1423 aa18.93■□□□□ 0.62
ABCC4-202ENST00000467685 CUX1P39880 1505 aa18.92■□□□□ 0.62
ABCC4-202ENST00000467685 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
ABCC4-202ENST00000467685 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
ABCC4-202ENST00000467685 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61
ABCC4-202ENST00000467685 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
ABCC4-202ENST00000467685 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
ABCC4-202ENST00000467685 CHD1O14646 1710 aa18.77■□□□□ 0.6
ABCC4-202ENST00000467685 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
ABCC4-202ENST00000467685 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
ABCC4-202ENST00000467685 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
ABCC4-202ENST00000467685 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
ABCC4-202ENST00000467685 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
ABCC4-202ENST00000467685 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
ABCC4-202ENST00000467685 FBLN2P98095 1184 aa18.72■□□□□ 0.59
ABCC4-202ENST00000467685 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
ABCC4-202ENST00000467685 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
ABCC4-202ENST00000467685 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
ABCC4-202ENST00000467685 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
ABCC4-202ENST00000467685 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
ABCC4-202ENST00000467685 CHMP7Q8WUX9 453 aaPredicted RBP18.67■□□□□ 0.58
ABCC4-202ENST00000467685 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
ABCC4-202ENST00000467685 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
ABCC4-202ENST00000467685 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
ABCC4-202ENST00000467685 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
ABCC4-202ENST00000467685 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
ABCC4-202ENST00000467685 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
ABCC4-202ENST00000467685 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
ABCC4-202ENST00000467685 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
ABCC4-202ENST00000467685 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
ABCC4-202ENST00000467685 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
ABCC4-202ENST00000467685 GRIN2AQ12879 1464 aa18.48■□□□□ 0.55
ABCC4-202ENST00000467685 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
ABCC4-202ENST00000467685 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
ABCC4-202ENST00000467685 NUP160Q12769 1436 aa18.41■□□□□ 0.54
ABCC4-202ENST00000467685 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
ABCC4-202ENST00000467685 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
ABCC4-202ENST00000467685 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
ABCC4-202ENST00000467685 CUL7Q14999 1698 aa18.34■□□□□ 0.53
ABCC4-202ENST00000467685 IGF1RP08069 1367 aa18.31■□□□□ 0.52
ABCC4-202ENST00000467685 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms