RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
TMEM254-209ENST00000467529 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.38
TMEM254-209ENST00000467529 ZCCHC6Q5VYS8 1495 aaKnown RBP16.87■□□□□ 0.29
TMEM254-209ENST00000467529 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
TMEM254-209ENST00000467529 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
TMEM254-209ENST00000467529 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
TMEM254-209ENST00000467529 ABCC9O60706 1549 aa16.38■□□□□ 0.21
TMEM254-209ENST00000467529 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
TMEM254-209ENST00000467529 NACADO15069 1562 aa16.17■□□□□ 0.18
TMEM254-209ENST00000467529 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
TMEM254-209ENST00000467529 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
TMEM254-209ENST00000467529 SUPT5HO00267 1087 aaKnown RBP15.95■□□□□ 0.14
TMEM254-209ENST00000467529 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
TMEM254-209ENST00000467529 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
TMEM254-209ENST00000467529 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
TMEM254-209ENST00000467529 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
TMEM254-209ENST00000467529 MROH2BQ7Z745 1585 aa15.52■□□□□ 0.08
TMEM254-209ENST00000467529 PABPN1Q86U42 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
TMEM254-209ENST00000467529 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
TMEM254-209ENST00000467529 WIZO95785 1651 aa15.41■□□□□ 0.06
TMEM254-209ENST00000467529 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
TMEM254-209ENST00000467529 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.05
TMEM254-209ENST00000467529 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
TMEM254-209ENST00000467529 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
TMEM254-209ENST00000467529 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
TMEM254-209ENST00000467529 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
TMEM254-209ENST00000467529 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
TMEM254-209ENST00000467529 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
TMEM254-209ENST00000467529 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
TMEM254-209ENST00000467529 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
TMEM254-209ENST00000467529 NCAPD3P42695 1498 aa14.93□□□□□ -0.02
TMEM254-209ENST00000467529 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
TMEM254-209ENST00000467529 ABCC8Q09428 1581 aa14.83□□□□□ -0.04
TMEM254-209ENST00000467529 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
TMEM254-209ENST00000467529 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
TMEM254-209ENST00000467529 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
TMEM254-209ENST00000467529 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
TMEM254-209ENST00000467529 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
TMEM254-209ENST00000467529 CFTRP13569 1480 aa14.64□□□□□ -0.07
TMEM254-209ENST00000467529 SOGA1O94964 1423 aa14.58□□□□□ -0.07
TMEM254-209ENST00000467529 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
TMEM254-209ENST00000467529 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
TMEM254-209ENST00000467529 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
TMEM254-209ENST00000467529 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
TMEM254-209ENST00000467529 BIVM-ERCC5R4GMW8 1640 aa14.54□□□□□ -0.08
TMEM254-209ENST00000467529 RUSC2Q8N2Y8 1516 aa14.53□□□□□ -0.08
TMEM254-209ENST00000467529 EEA1Q15075 1411 aa14.53□□□□□ -0.08
TMEM254-209ENST00000467529 CUX1P39880 1505 aa14.5□□□□□ -0.09
TMEM254-209ENST00000467529 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
TMEM254-209ENST00000467529 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
TMEM254-209ENST00000467529 NESP48681 1621 aa14.43□□□□□ -0.1
TMEM254-209ENST00000467529 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
TMEM254-209ENST00000467529 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
TMEM254-209ENST00000467529 GOLGA3Q08378 1498 aa14.35□□□□□ -0.11
TMEM254-209ENST00000467529 KIF21BO75037 1637 aa14.35□□□□□ -0.11
TMEM254-209ENST00000467529 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
TMEM254-209ENST00000467529 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
TMEM254-209ENST00000467529 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
TMEM254-209ENST00000467529 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
TMEM254-209ENST00000467529 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
TMEM254-209ENST00000467529 KIF27Q86VH2 1401 aa14.3□□□□□ -0.12
TMEM254-209ENST00000467529 CEP162Q5TB80 1403 aa14.28□□□□□ -0.12
TMEM254-209ENST00000467529 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
TMEM254-209ENST00000467529 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
TMEM254-209ENST00000467529 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
TMEM254-209ENST00000467529 KIF21AQ7Z4S6 1674 aa14.25□□□□□ -0.13
TMEM254-209ENST00000467529 CUX2O14529 1486 aa14.25□□□□□ -0.13
TMEM254-209ENST00000467529 PRXQ9BXM0 1461 aa14.25□□□□□ -0.13
TMEM254-209ENST00000467529 URB2Q14146 1524 aaKnown RBP14.24□□□□□ -0.13
TMEM254-209ENST00000467529 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
TMEM254-209ENST00000467529 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
TMEM254-209ENST00000467529 POLA1P09884 1462 aaPredicted RBP14.22□□□□□ -0.13
TMEM254-209ENST00000467529 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
TMEM254-209ENST00000467529 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
TMEM254-209ENST00000467529 TRIM26Q12899 539 aaPredicted RBP14.18□□□□□ -0.14
TMEM254-209ENST00000467529 IGF1RP08069 1367 aa14.18□□□□□ -0.14
TMEM254-209ENST00000467529 CLIP1P30622 1438 aa14.14□□□□□ -0.15
TMEM254-209ENST00000467529 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
TMEM254-209ENST00000467529 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
TMEM254-209ENST00000467529 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
TMEM254-209ENST00000467529 PPARGC1BQ86YN6 1023 aaKnown RBP14.09□□□□□ -0.15
TMEM254-209ENST00000467529 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
TMEM254-209ENST00000467529 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
TMEM254-209ENST00000467529 ABCA5Q8WWZ7 1642 aa14.05□□□□□ -0.16
TMEM254-209ENST00000467529 TDRD9Q8NDG6 1382 aaKnown RBP14.04□□□□□ -0.16
TMEM254-209ENST00000467529 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
TMEM254-209ENST00000467529 CUL7Q14999 1698 aa14.03□□□□□ -0.16
TMEM254-209ENST00000467529 GAPVD1Q14C86 1478 aa14.02□□□□□ -0.17
TMEM254-209ENST00000467529 WDR62O43379 1518 aa14.02□□□□□ -0.17
TMEM254-209ENST00000467529 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
TMEM254-209ENST00000467529 ARAP1Q96P48 1450 aa14□□□□□ -0.17
TMEM254-209ENST00000467529 ARHGAP35Q9NRY4 1499 aa13.97□□□□□ -0.17
TMEM254-209ENST00000467529 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.17
TMEM254-209ENST00000467529 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
TMEM254-209ENST00000467529 PBRM1Q86U86 1689 aa13.94□□□□□ -0.18
TMEM254-209ENST00000467529 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
TMEM254-209ENST00000467529 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
TMEM254-209ENST00000467529 HRCP23327 699 aa13.92□□□□□ -0.18
TMEM254-209ENST00000467529 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
TMEM254-209ENST00000467529 APLP2Q06481 763 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms