RNA–Protein interactions for RNA: ENST00000467384.6

CAPN8-207, Transcript of calpain 8, humanhuman

TSL 5

Gene CAPN8, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-207ENST00000467384 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
CAPN8-207ENST00000467384 ABCC9O60706 1549 aa23.29■■□□□ 1.32
CAPN8-207ENST00000467384 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
CAPN8-207ENST00000467384 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
CAPN8-207ENST00000467384 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
CAPN8-207ENST00000467384 NACADO15069 1562 aa21.82■■□□□ 1.08
CAPN8-207ENST00000467384 PABPN1Q86U42 306 aaKnown RBP eCLIP21.62■■□□□ 1.05
CAPN8-207ENST00000467384 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
CAPN8-207ENST00000467384 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
CAPN8-207ENST00000467384 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
CAPN8-207ENST00000467384 MYO15BQ96JP2 1530 aa21.43■■□□□ 1.02
CAPN8-207ENST00000467384 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
CAPN8-207ENST00000467384 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
CAPN8-207ENST00000467384 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
CAPN8-207ENST00000467384 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
CAPN8-207ENST00000467384 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.96
CAPN8-207ENST00000467384 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
CAPN8-207ENST00000467384 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
CAPN8-207ENST00000467384 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
CAPN8-207ENST00000467384 CUX2O14529 1486 aa20.23■□□□□ 0.83
CAPN8-207ENST00000467384 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
CAPN8-207ENST00000467384 ERCC6Q03468 1493 aa20.12■□□□□ 0.81
CAPN8-207ENST00000467384 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
CAPN8-207ENST00000467384 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
CAPN8-207ENST00000467384 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
CAPN8-207ENST00000467384 SMARCA4P51532 1647 aa19.94■□□□□ 0.78
CAPN8-207ENST00000467384 NESP48681 1621 aa19.93■□□□□ 0.78
CAPN8-207ENST00000467384 THOC2Q8NI27 1593 aaKnown RBP19.82■□□□□ 0.76
CAPN8-207ENST00000467384 BAZ1BQ9UIG0 1483 aaKnown RBP19.81■□□□□ 0.76
CAPN8-207ENST00000467384 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
CAPN8-207ENST00000467384 PEG3Q9GZU2 1588 aa19.77■□□□□ 0.76
CAPN8-207ENST00000467384 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
CAPN8-207ENST00000467384 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
CAPN8-207ENST00000467384 MROH2BQ7Z745 1585 aa19.62■□□□□ 0.73
CAPN8-207ENST00000467384 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
CAPN8-207ENST00000467384 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
CAPN8-207ENST00000467384 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
CAPN8-207ENST00000467384 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
CAPN8-207ENST00000467384 WDR62O43379 1518 aa19.46■□□□□ 0.71
CAPN8-207ENST00000467384 WIZO95785 1651 aa19.38■□□□□ 0.69
CAPN8-207ENST00000467384 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
CAPN8-207ENST00000467384 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
CAPN8-207ENST00000467384 SUPT5HO00267 1087 aaKnown RBP19.24■□□□□ 0.67
CAPN8-207ENST00000467384 CFTRP13569 1480 aa19.23■□□□□ 0.67
CAPN8-207ENST00000467384 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
CAPN8-207ENST00000467384 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
CAPN8-207ENST00000467384 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
CAPN8-207ENST00000467384 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
CAPN8-207ENST00000467384 RIMBP3CA6NJZ7 1639 aa19.04■□□□□ 0.64
CAPN8-207ENST00000467384 RIMBP3BA6NNM3 1639 aa19.04■□□□□ 0.64
CAPN8-207ENST00000467384 RIMBP3Q9UFD9 1639 aa19.04■□□□□ 0.64
CAPN8-207ENST00000467384 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
CAPN8-207ENST00000467384 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
CAPN8-207ENST00000467384 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
CAPN8-207ENST00000467384 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
CAPN8-207ENST00000467384 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
CAPN8-207ENST00000467384 CCDC88BA6NC98 1476 aa18.88■□□□□ 0.61
CAPN8-207ENST00000467384 EIF4G3O43432 1585 aaKnown RBP18.87■□□□□ 0.61
CAPN8-207ENST00000467384 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
CAPN8-207ENST00000467384 DNMBPQ6XZF7 1577 aa18.8■□□□□ 0.6
CAPN8-207ENST00000467384 CYB5RLQ6IPT4 315 aa18.79■□□□□ 0.6
CAPN8-207ENST00000467384 CHD1O14646 1710 aa18.79■□□□□ 0.6
CAPN8-207ENST00000467384 TARBP1Q13395 1621 aaKnown RBP18.76■□□□□ 0.59
CAPN8-207ENST00000467384 AQRO60306 1485 aaKnown RBP eCLIP18.75■□□□□ 0.59
CAPN8-207ENST00000467384 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
CAPN8-207ENST00000467384 POLA1P09884 1462 aaPredicted RBP18.69■□□□□ 0.58
CAPN8-207ENST00000467384 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
CAPN8-207ENST00000467384 FBLN2P98095 1184 aa18.66■□□□□ 0.58
CAPN8-207ENST00000467384 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
CAPN8-207ENST00000467384 CHIC1Q5VXU3 224 aa18.6■□□□□ 0.57
CAPN8-207ENST00000467384 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
CAPN8-207ENST00000467384 SOGA1O94964 1423 aa18.57■□□□□ 0.56
CAPN8-207ENST00000467384 TDRD9Q8NDG6 1382 aaKnown RBP18.57■□□□□ 0.56
CAPN8-207ENST00000467384 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
CAPN8-207ENST00000467384 SNAPC4Q5SXM2 1469 aa18.56■□□□□ 0.56
CAPN8-207ENST00000467384 WDR97A6NE52 1622 aa18.55■□□□□ 0.56
CAPN8-207ENST00000467384 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.55
CAPN8-207ENST00000467384 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
CAPN8-207ENST00000467384 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
CAPN8-207ENST00000467384 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
CAPN8-207ENST00000467384 GRIN2BQ13224 1484 aa18.46■□□□□ 0.54
CAPN8-207ENST00000467384 CUX1P39880 1505 aa18.45■□□□□ 0.54
CAPN8-207ENST00000467384 SYNJ2O15056 1496 aa18.44■□□□□ 0.54
CAPN8-207ENST00000467384 PBRM1Q86U86 1689 aa18.39■□□□□ 0.53
CAPN8-207ENST00000467384 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
CAPN8-207ENST00000467384 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
CAPN8-207ENST00000467384 ABCA10Q8WWZ4 1543 aa18.29■□□□□ 0.52
CAPN8-207ENST00000467384 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
CAPN8-207ENST00000467384 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
CAPN8-207ENST00000467384 CEP170Q5SW79 1584 aa18.19■□□□□ 0.5
CAPN8-207ENST00000467384 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
CAPN8-207ENST00000467384 NUP160Q12769 1436 aa18.18■□□□□ 0.5
CAPN8-207ENST00000467384 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
CAPN8-207ENST00000467384 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
CAPN8-207ENST00000467384 KIF13AQ9H1H9 1805 aa18.1■□□□□ 0.49
CAPN8-207ENST00000467384 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
CAPN8-207ENST00000467384 BIVM-ERCC5R4GMW8 1640 aa18.09■□□□□ 0.49
CAPN8-207ENST00000467384 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
CAPN8-207ENST00000467384 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
CAPN8-207ENST00000467384 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms