RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 NISCHQ9Y2I1 1504 aa25.37■■□□□ 1.65
RERE-209ENST00000467350 ABCC9O60706 1549 aa22.61■■□□□ 1.21
RERE-209ENST00000467350 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
RERE-209ENST00000467350 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
RERE-209ENST00000467350 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
RERE-209ENST00000467350 NACADO15069 1562 aa21.47■■□□□ 1.03
RERE-209ENST00000467350 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
RERE-209ENST00000467350 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
RERE-209ENST00000467350 PABPN1Q86U42 306 aaKnown RBP eCLIP21.18■□□□□ 0.98
RERE-209ENST00000467350 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
RERE-209ENST00000467350 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
RERE-209ENST00000467350 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
RERE-209ENST00000467350 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
RERE-209ENST00000467350 UNC13AQ9UPW8 1703 aa20.77■□□□□ 0.92
RERE-209ENST00000467350 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
RERE-209ENST00000467350 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
RERE-209ENST00000467350 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
RERE-209ENST00000467350 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
RERE-209ENST00000467350 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
RERE-209ENST00000467350 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
RERE-209ENST00000467350 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
RERE-209ENST00000467350 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
RERE-209ENST00000467350 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
RERE-209ENST00000467350 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
RERE-209ENST00000467350 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
RERE-209ENST00000467350 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
RERE-209ENST00000467350 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
RERE-209ENST00000467350 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
RERE-209ENST00000467350 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
RERE-209ENST00000467350 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
RERE-209ENST00000467350 CUX2O14529 1486 aa19.48■□□□□ 0.71
RERE-209ENST00000467350 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
RERE-209ENST00000467350 NESP48681 1621 aa19.4■□□□□ 0.7
RERE-209ENST00000467350 PDS5BQ9NTI5 1447 aa19.35■□□□□ 0.69
RERE-209ENST00000467350 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
RERE-209ENST00000467350 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
RERE-209ENST00000467350 RSF1Q96T23 1441 aaPredicted RBP19.24■□□□□ 0.67
RERE-209ENST00000467350 WIZO95785 1651 aa19.2■□□□□ 0.66
RERE-209ENST00000467350 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.65
RERE-209ENST00000467350 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
RERE-209ENST00000467350 CFTRP13569 1480 aa19.06■□□□□ 0.64
RERE-209ENST00000467350 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
RERE-209ENST00000467350 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
RERE-209ENST00000467350 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
RERE-209ENST00000467350 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
RERE-209ENST00000467350 WDR62O43379 1518 aa18.95■□□□□ 0.62
RERE-209ENST00000467350 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
RERE-209ENST00000467350 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
RERE-209ENST00000467350 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
RERE-209ENST00000467350 ABCC8Q09428 1581 aa18.73■□□□□ 0.59
RERE-209ENST00000467350 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
RERE-209ENST00000467350 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
RERE-209ENST00000467350 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
RERE-209ENST00000467350 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
RERE-209ENST00000467350 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
RERE-209ENST00000467350 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
RERE-209ENST00000467350 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
RERE-209ENST00000467350 SOGA1O94964 1423 aa18.49■□□□□ 0.55
RERE-209ENST00000467350 FBLN2P98095 1184 aa18.47■□□□□ 0.55
RERE-209ENST00000467350 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.55
RERE-209ENST00000467350 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
RERE-209ENST00000467350 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
RERE-209ENST00000467350 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.54
RERE-209ENST00000467350 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
RERE-209ENST00000467350 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
RERE-209ENST00000467350 EIF4G3O43432 1585 aaKnown RBP18.36■□□□□ 0.53
RERE-209ENST00000467350 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
RERE-209ENST00000467350 CUX1P39880 1505 aa18.32■□□□□ 0.52
RERE-209ENST00000467350 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
RERE-209ENST00000467350 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
RERE-209ENST00000467350 WDR97A6NE52 1622 aa18.27■□□□□ 0.51
RERE-209ENST00000467350 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
RERE-209ENST00000467350 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
RERE-209ENST00000467350 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
RERE-209ENST00000467350 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
RERE-209ENST00000467350 RIMBP3CA6NJZ7 1639 aa18.22■□□□□ 0.51
RERE-209ENST00000467350 RIMBP3BA6NNM3 1639 aa18.22■□□□□ 0.51
RERE-209ENST00000467350 RIMBP3Q9UFD9 1639 aa18.22■□□□□ 0.51
RERE-209ENST00000467350 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
RERE-209ENST00000467350 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
RERE-209ENST00000467350 SYNJ2O15056 1496 aa18.18■□□□□ 0.5
RERE-209ENST00000467350 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
RERE-209ENST00000467350 CHD1O14646 1710 aa18.13■□□□□ 0.49
RERE-209ENST00000467350 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
RERE-209ENST00000467350 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
RERE-209ENST00000467350 ARAP1Q96P48 1450 aa18.06■□□□□ 0.48
RERE-209ENST00000467350 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
RERE-209ENST00000467350 CLASP1Q7Z460 1538 aa18.04■□□□□ 0.48
RERE-209ENST00000467350 FHAD1B1AJZ9 1412 aa18.02■□□□□ 0.48
RERE-209ENST00000467350 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
RERE-209ENST00000467350 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
RERE-209ENST00000467350 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
RERE-209ENST00000467350 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
RERE-209ENST00000467350 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
RERE-209ENST00000467350 NUP160Q12769 1436 aa17.93■□□□□ 0.46
RERE-209ENST00000467350 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
RERE-209ENST00000467350 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
RERE-209ENST00000467350 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
RERE-209ENST00000467350 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
RERE-209ENST00000467350 IGF1RP08069 1367 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms