RNA–Protein interactions for RNA: ENST00000467333.1

KRBA1-202, Transcript of KRAB-A domain containing 1, humanhuman

TSL 2

Gene KRBA1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-202ENST00000467333 NISCHQ9Y2I1 1504 aa28.33■■■□□ 2.13
KRBA1-202ENST00000467333 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
KRBA1-202ENST00000467333 ABCC9O60706 1549 aa24.73■■□□□ 1.55
KRBA1-202ENST00000467333 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
KRBA1-202ENST00000467333 NACADO15069 1562 aa23.84■■□□□ 1.41
KRBA1-202ENST00000467333 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
KRBA1-202ENST00000467333 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
KRBA1-202ENST00000467333 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
KRBA1-202ENST00000467333 DCAF8L2P0C7V8 631 aa23.41■■□□□ 1.34
KRBA1-202ENST00000467333 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
KRBA1-202ENST00000467333 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.3
KRBA1-202ENST00000467333 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
KRBA1-202ENST00000467333 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
KRBA1-202ENST00000467333 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
KRBA1-202ENST00000467333 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
KRBA1-202ENST00000467333 EIF4G1Q04637 1599 aaKnown RBP22.54■■□□□ 1.2
KRBA1-202ENST00000467333 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
KRBA1-202ENST00000467333 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
KRBA1-202ENST00000467333 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
KRBA1-202ENST00000467333 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
KRBA1-202ENST00000467333 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
KRBA1-202ENST00000467333 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
KRBA1-202ENST00000467333 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
KRBA1-202ENST00000467333 PEG3Q9GZU2 1588 aa21.91■■□□□ 1.1
KRBA1-202ENST00000467333 HMGXB3Q12766 1538 aa21.9■■□□□ 1.1
KRBA1-202ENST00000467333 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
KRBA1-202ENST00000467333 BAZ1BQ9UIG0 1483 aaKnown RBP21.71■■□□□ 1.07
KRBA1-202ENST00000467333 WIZO95785 1651 aa21.53■■□□□ 1.04
KRBA1-202ENST00000467333 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
KRBA1-202ENST00000467333 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
KRBA1-202ENST00000467333 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
KRBA1-202ENST00000467333 NESP48681 1621 aa21.37■■□□□ 1.01
KRBA1-202ENST00000467333 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
KRBA1-202ENST00000467333 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
KRBA1-202ENST00000467333 CUX2O14529 1486 aa21.32■■□□□ 1
KRBA1-202ENST00000467333 CADPSQ9ULU8 1353 aa21.26■□□□□ 0.99
KRBA1-202ENST00000467333 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
KRBA1-202ENST00000467333 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
KRBA1-202ENST00000467333 KIF21AQ7Z4S6 1674 aa21.19■□□□□ 0.98
KRBA1-202ENST00000467333 CFTRP13569 1480 aa21.15■□□□□ 0.98
KRBA1-202ENST00000467333 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
KRBA1-202ENST00000467333 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
KRBA1-202ENST00000467333 MRC2Q9UBG0 1479 aa21.03■□□□□ 0.96
KRBA1-202ENST00000467333 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
KRBA1-202ENST00000467333 WDR62O43379 1518 aa21.02■□□□□ 0.96
KRBA1-202ENST00000467333 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
KRBA1-202ENST00000467333 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
KRBA1-202ENST00000467333 ABCC8Q09428 1581 aa20.73■□□□□ 0.91
KRBA1-202ENST00000467333 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
KRBA1-202ENST00000467333 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
KRBA1-202ENST00000467333 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
KRBA1-202ENST00000467333 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
KRBA1-202ENST00000467333 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
KRBA1-202ENST00000467333 TARBP1Q13395 1621 aaKnown RBP20.51■□□□□ 0.87
KRBA1-202ENST00000467333 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
KRBA1-202ENST00000467333 WDR97A6NE52 1622 aa20.45■□□□□ 0.87
KRBA1-202ENST00000467333 CUX1P39880 1505 aa20.45■□□□□ 0.86
KRBA1-202ENST00000467333 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
KRBA1-202ENST00000467333 EIF4G3O43432 1585 aaKnown RBP20.44■□□□□ 0.86
KRBA1-202ENST00000467333 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
KRBA1-202ENST00000467333 SOGA1O94964 1423 aa20.35■□□□□ 0.85
KRBA1-202ENST00000467333 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
KRBA1-202ENST00000467333 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
KRBA1-202ENST00000467333 TOP2BQ02880 1626 aa20.29■□□□□ 0.84
KRBA1-202ENST00000467333 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.843e-6■■■■■ 57.4
KRBA1-202ENST00000467333 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
KRBA1-202ENST00000467333 ABCA10Q8WWZ4 1543 aa20.25■□□□□ 0.83
KRBA1-202ENST00000467333 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
KRBA1-202ENST00000467333 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
KRBA1-202ENST00000467333 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
KRBA1-202ENST00000467333 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
KRBA1-202ENST00000467333 CHD1O14646 1710 aa20.19■□□□□ 0.82
KRBA1-202ENST00000467333 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
KRBA1-202ENST00000467333 MAGI1Q96QZ7 1491 aaPredicted RBP20.19■□□□□ 0.82
KRBA1-202ENST00000467333 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
KRBA1-202ENST00000467333 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
KRBA1-202ENST00000467333 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
KRBA1-202ENST00000467333 SYNJ2O15056 1496 aa20.1■□□□□ 0.81
KRBA1-202ENST00000467333 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
KRBA1-202ENST00000467333 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
KRBA1-202ENST00000467333 RIMBP3CA6NJZ7 1639 aa20.02■□□□□ 0.79
KRBA1-202ENST00000467333 RIMBP3BA6NNM3 1639 aa20.02■□□□□ 0.79
KRBA1-202ENST00000467333 RIMBP3Q9UFD9 1639 aa20.02■□□□□ 0.79
KRBA1-202ENST00000467333 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
KRBA1-202ENST00000467333 ADAMTS12P58397 1594 aa20■□□□□ 0.79
KRBA1-202ENST00000467333 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
KRBA1-202ENST00000467333 FBLN2P98095 1184 aa19.95■□□□□ 0.78
KRBA1-202ENST00000467333 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
KRBA1-202ENST00000467333 GRIN2AQ12879 1464 aa19.93■□□□□ 0.78
KRBA1-202ENST00000467333 NUP160Q12769 1436 aa19.89■□□□□ 0.77
KRBA1-202ENST00000467333 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
KRBA1-202ENST00000467333 CEP170Q5SW79 1584 aa19.83■□□□□ 0.77
KRBA1-202ENST00000467333 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
KRBA1-202ENST00000467333 CUL7Q14999 1698 aa19.83■□□□□ 0.76
KRBA1-202ENST00000467333 TRIM41Q8WV44 630 aa19.8■□□□□ 0.76
KRBA1-202ENST00000467333 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
KRBA1-202ENST00000467333 IGF1RP08069 1367 aa19.76■□□□□ 0.75
KRBA1-202ENST00000467333 CHIC1Q5VXU3 224 aa19.75■□□□□ 0.75
KRBA1-202ENST00000467333 RUSC2Q8N2Y8 1516 aa19.72■□□□□ 0.75
KRBA1-202ENST00000467333 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms