RNA–Protein interactions for RNA: ENST00000467303.5

RUBCN-207, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 4

Gene RUBCN, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-207ENST00000467303 NISCHQ9Y2I1 1504 aa22.19■■□□□ 1.14
RUBCN-207ENST00000467303 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.76
RUBCN-207ENST00000467303 ABCC9O60706 1549 aa19.56■□□□□ 0.72
RUBCN-207ENST00000467303 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
RUBCN-207ENST00000467303 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
RUBCN-207ENST00000467303 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
RUBCN-207ENST00000467303 NACADO15069 1562 aa18.64■□□□□ 0.58
RUBCN-207ENST00000467303 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
RUBCN-207ENST00000467303 ZCCHC6Q5VYS8 1495 aaKnown RBP18.46■□□□□ 0.55
RUBCN-207ENST00000467303 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
RUBCN-207ENST00000467303 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
RUBCN-207ENST00000467303 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
RUBCN-207ENST00000467303 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
RUBCN-207ENST00000467303 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
RUBCN-207ENST00000467303 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
RUBCN-207ENST00000467303 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
RUBCN-207ENST00000467303 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
RUBCN-207ENST00000467303 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
RUBCN-207ENST00000467303 CC2D2AQ9P2K1 1620 aa17.68■□□□□ 0.42
RUBCN-207ENST00000467303 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
RUBCN-207ENST00000467303 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
RUBCN-207ENST00000467303 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
RUBCN-207ENST00000467303 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
RUBCN-207ENST00000467303 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
RUBCN-207ENST00000467303 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
RUBCN-207ENST00000467303 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
RUBCN-207ENST00000467303 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
RUBCN-207ENST00000467303 PEG3Q9GZU2 1588 aa17.1■□□□□ 0.33
RUBCN-207ENST00000467303 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
RUBCN-207ENST00000467303 WIZO95785 1651 aa16.94■□□□□ 0.3
RUBCN-207ENST00000467303 NESP48681 1621 aa16.88■□□□□ 0.29
RUBCN-207ENST00000467303 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
RUBCN-207ENST00000467303 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
RUBCN-207ENST00000467303 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
RUBCN-207ENST00000467303 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
RUBCN-207ENST00000467303 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
RUBCN-207ENST00000467303 CUX2O14529 1486 aa16.72■□□□□ 0.27
RUBCN-207ENST00000467303 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
RUBCN-207ENST00000467303 THOC2Q8NI27 1593 aaKnown RBP16.68■□□□□ 0.26
RUBCN-207ENST00000467303 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
RUBCN-207ENST00000467303 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
RUBCN-207ENST00000467303 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
RUBCN-207ENST00000467303 CFTRP13569 1480 aa16.56■□□□□ 0.24
RUBCN-207ENST00000467303 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
RUBCN-207ENST00000467303 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
RUBCN-207ENST00000467303 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
RUBCN-207ENST00000467303 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.23
RUBCN-207ENST00000467303 WDR62O43379 1518 aa16.49■□□□□ 0.23
RUBCN-207ENST00000467303 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
RUBCN-207ENST00000467303 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
RUBCN-207ENST00000467303 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
RUBCN-207ENST00000467303 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
RUBCN-207ENST00000467303 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
RUBCN-207ENST00000467303 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
RUBCN-207ENST00000467303 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
RUBCN-207ENST00000467303 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
RUBCN-207ENST00000467303 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
RUBCN-207ENST00000467303 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
RUBCN-207ENST00000467303 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
RUBCN-207ENST00000467303 EIF4G3O43432 1585 aaKnown RBP16.09■□□□□ 0.17
RUBCN-207ENST00000467303 CUX1P39880 1505 aa16.07■□□□□ 0.16
RUBCN-207ENST00000467303 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
RUBCN-207ENST00000467303 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
RUBCN-207ENST00000467303 AQRO60306 1485 aaKnown RBP eCLIP16■□□□□ 0.15
RUBCN-207ENST00000467303 SOGA1O94964 1423 aa16■□□□□ 0.15
RUBCN-207ENST00000467303 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
RUBCN-207ENST00000467303 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
RUBCN-207ENST00000467303 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
RUBCN-207ENST00000467303 CHD1O14646 1710 aa15.91■□□□□ 0.14
RUBCN-207ENST00000467303 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
RUBCN-207ENST00000467303 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
RUBCN-207ENST00000467303 TOP2BQ02880 1626 aa15.88■□□□□ 0.13
RUBCN-207ENST00000467303 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.13
RUBCN-207ENST00000467303 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
RUBCN-207ENST00000467303 ABCA10Q8WWZ4 1543 aa15.84■□□□□ 0.13
RUBCN-207ENST00000467303 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
RUBCN-207ENST00000467303 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
RUBCN-207ENST00000467303 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
RUBCN-207ENST00000467303 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
RUBCN-207ENST00000467303 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
RUBCN-207ENST00000467303 FBLN2P98095 1184 aa15.81■□□□□ 0.12
RUBCN-207ENST00000467303 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
RUBCN-207ENST00000467303 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
RUBCN-207ENST00000467303 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
RUBCN-207ENST00000467303 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
RUBCN-207ENST00000467303 ARHGEF11O15085 1522 aa15.77■□□□□ 0.11
RUBCN-207ENST00000467303 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
RUBCN-207ENST00000467303 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
RUBCN-207ENST00000467303 CLASP1Q7Z460 1538 aa15.72■□□□□ 0.11
RUBCN-207ENST00000467303 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
RUBCN-207ENST00000467303 ERICH3Q5RHP9 1530 aa15.66■□□□□ 0.1
RUBCN-207ENST00000467303 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
RUBCN-207ENST00000467303 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
RUBCN-207ENST00000467303 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
RUBCN-207ENST00000467303 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
RUBCN-207ENST00000467303 CYB5RLQ6IPT4 315 aa15.58■□□□□ 0.08
RUBCN-207ENST00000467303 NUP160Q12769 1436 aa15.58■□□□□ 0.08
RUBCN-207ENST00000467303 KIF27Q86VH2 1401 aa15.54■□□□□ 0.08
RUBCN-207ENST00000467303 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
RUBCN-207ENST00000467303 CUL7Q14999 1698 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms