RNA–Protein interactions for RNA: ENST00000467216.2

COL21A1-207, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-207ENST00000467216 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
COL21A1-207ENST00000467216 ABCC9O60706 1549 aa30.63■■■□□ 2.49
COL21A1-207ENST00000467216 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
COL21A1-207ENST00000467216 RB1CC1Q8TDY2 1594 aa29.02■■■□□ 2.24
COL21A1-207ENST00000467216 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
COL21A1-207ENST00000467216 NACADO15069 1562 aa28.74■■■□□ 2.19
COL21A1-207ENST00000467216 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
COL21A1-207ENST00000467216 PABPN1Q86U42 306 aaKnown RBP eCLIP28.51■■■□□ 2.15
COL21A1-207ENST00000467216 MYO15BQ96JP2 1530 aa28.2■■■□□ 2.1
COL21A1-207ENST00000467216 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
COL21A1-207ENST00000467216 BICRAQ9NZM4 1560 aa28.06■■■□□ 2.08
COL21A1-207ENST00000467216 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
COL21A1-207ENST00000467216 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.04
COL21A1-207ENST00000467216 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
COL21A1-207ENST00000467216 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.01
COL21A1-207ENST00000467216 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
COL21A1-207ENST00000467216 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
COL21A1-207ENST00000467216 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
COL21A1-207ENST00000467216 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
COL21A1-207ENST00000467216 ERCC6Q03468 1493 aa26.56■■□□□ 1.84
COL21A1-207ENST00000467216 CUX2O14529 1486 aa26.53■■□□□ 1.84
COL21A1-207ENST00000467216 NCAPD3P42695 1498 aa26.52■■□□□ 1.84
COL21A1-207ENST00000467216 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
COL21A1-207ENST00000467216 SMARCA2P51531 1590 aa26.35■■□□□ 1.81
COL21A1-207ENST00000467216 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
COL21A1-207ENST00000467216 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
COL21A1-207ENST00000467216 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
COL21A1-207ENST00000467216 NESP48681 1621 aa26.17■■□□□ 1.78
COL21A1-207ENST00000467216 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
COL21A1-207ENST00000467216 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
COL21A1-207ENST00000467216 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
COL21A1-207ENST00000467216 PDS5BQ9NTI5 1447 aa25.93■■□□□ 1.74
COL21A1-207ENST00000467216 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
COL21A1-207ENST00000467216 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
COL21A1-207ENST00000467216 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
COL21A1-207ENST00000467216 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
COL21A1-207ENST00000467216 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
COL21A1-207ENST00000467216 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
COL21A1-207ENST00000467216 WDR62O43379 1518 aa25.56■■□□□ 1.68
COL21A1-207ENST00000467216 WIZO95785 1651 aa25.55■■□□□ 1.68
COL21A1-207ENST00000467216 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
COL21A1-207ENST00000467216 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
COL21A1-207ENST00000467216 OSCARQ8IYS5 282 aa25.35■■□□□ 1.65
COL21A1-207ENST00000467216 CFTRP13569 1480 aa25.34■■□□□ 1.65
COL21A1-207ENST00000467216 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
COL21A1-207ENST00000467216 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
COL21A1-207ENST00000467216 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
COL21A1-207ENST00000467216 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
COL21A1-207ENST00000467216 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
COL21A1-207ENST00000467216 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
COL21A1-207ENST00000467216 ZNF608Q9ULD9 1512 aaPredicted RBP24.95■■□□□ 1.58
COL21A1-207ENST00000467216 RIMBP3CA6NJZ7 1639 aa24.91■■□□□ 1.58
COL21A1-207ENST00000467216 RIMBP3BA6NNM3 1639 aa24.91■■□□□ 1.58
COL21A1-207ENST00000467216 RIMBP3Q9UFD9 1639 aa24.91■■□□□ 1.58
COL21A1-207ENST00000467216 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
COL21A1-207ENST00000467216 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
COL21A1-207ENST00000467216 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
COL21A1-207ENST00000467216 EIF4G3O43432 1585 aaKnown RBP24.79■■□□□ 1.56
COL21A1-207ENST00000467216 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
COL21A1-207ENST00000467216 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
COL21A1-207ENST00000467216 FBLN2P98095 1184 aa24.77■■□□□ 1.56
COL21A1-207ENST00000467216 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.55
COL21A1-207ENST00000467216 TRHP20396 242 aaPredicted RBP24.67■■□□□ 1.54
COL21A1-207ENST00000467216 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.53
COL21A1-207ENST00000467216 CHD1O14646 1710 aa24.63■■□□□ 1.53
COL21A1-207ENST00000467216 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
COL21A1-207ENST00000467216 SOGA1O94964 1423 aa24.58■■□□□ 1.53
COL21A1-207ENST00000467216 ARAP1Q96P48 1450 aa24.56■■□□□ 1.52
COL21A1-207ENST00000467216 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
COL21A1-207ENST00000467216 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
COL21A1-207ENST00000467216 CHMP7Q8WUX9 453 aaPredicted RBP24.51■■□□□ 1.51
COL21A1-207ENST00000467216 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
COL21A1-207ENST00000467216 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.51
COL21A1-207ENST00000467216 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
COL21A1-207ENST00000467216 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
COL21A1-207ENST00000467216 MAGI1Q96QZ7 1491 aaPredicted RBP24.4■■□□□ 1.5
COL21A1-207ENST00000467216 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
COL21A1-207ENST00000467216 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
COL21A1-207ENST00000467216 CUX1P39880 1505 aa24.34■■□□□ 1.49
COL21A1-207ENST00000467216 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
COL21A1-207ENST00000467216 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
COL21A1-207ENST00000467216 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
COL21A1-207ENST00000467216 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
COL21A1-207ENST00000467216 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
COL21A1-207ENST00000467216 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
COL21A1-207ENST00000467216 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
COL21A1-207ENST00000467216 WRNQ14191 1432 aaPredicted RBP eCLIP24.07■■□□□ 1.44
COL21A1-207ENST00000467216 GRIN2AQ12879 1464 aa24.05■■□□□ 1.44
COL21A1-207ENST00000467216 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
COL21A1-207ENST00000467216 NUP160Q12769 1436 aa23.95■■□□□ 1.42
COL21A1-207ENST00000467216 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
COL21A1-207ENST00000467216 CEP170Q5SW79 1584 aa23.93■■□□□ 1.42
COL21A1-207ENST00000467216 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
COL21A1-207ENST00000467216 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
COL21A1-207ENST00000467216 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
COL21A1-207ENST00000467216 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
COL21A1-207ENST00000467216 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
COL21A1-207ENST00000467216 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
COL21A1-207ENST00000467216 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
COL21A1-207ENST00000467216 NPM1P06748 294 aaKnown RBP eCLIP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms