RNA–Protein interactions for RNA: ENST00000467052.1

COL15A1-202, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-202ENST00000467052 NISCHQ9Y2I1 1504 aa35.44■■■■□ 3.26
COL15A1-202ENST00000467052 ABCC9O60706 1549 aa32.82■■■□□ 2.84
COL15A1-202ENST00000467052 CCDC180Q9P1Z9 1646 aa32.33■■■□□ 2.77
COL15A1-202ENST00000467052 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
COL15A1-202ENST00000467052 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
COL15A1-202ENST00000467052 NACADO15069 1562 aa30.62■■■□□ 2.49
COL15A1-202ENST00000467052 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.47
COL15A1-202ENST00000467052 PABPN1Q86U42 306 aaKnown RBP eCLIP30.29■■■□□ 2.44
COL15A1-202ENST00000467052 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
COL15A1-202ENST00000467052 DCAF8L2P0C7V8 631 aa30.07■■■□□ 2.4
COL15A1-202ENST00000467052 MYO15BQ96JP2 1530 aa29.93■■■□□ 2.38
COL15A1-202ENST00000467052 SHROOM4Q9ULL8 1493 aa29.71■■■□□ 2.35
COL15A1-202ENST00000467052 CC2D2AQ9P2K1 1620 aa29.7■■■□□ 2.34
COL15A1-202ENST00000467052 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
COL15A1-202ENST00000467052 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
COL15A1-202ENST00000467052 SCRIBQ14160 1630 aa29.32■■■□□ 2.28
COL15A1-202ENST00000467052 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
COL15A1-202ENST00000467052 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
COL15A1-202ENST00000467052 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
COL15A1-202ENST00000467052 CUX2O14529 1486 aa28.67■■■□□ 2.18
COL15A1-202ENST00000467052 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
COL15A1-202ENST00000467052 NCAPD3P42695 1498 aa28.16■■■□□ 2.1
COL15A1-202ENST00000467052 HMGXB3Q12766 1538 aa28.02■■■□□ 2.08
COL15A1-202ENST00000467052 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
COL15A1-202ENST00000467052 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
COL15A1-202ENST00000467052 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
COL15A1-202ENST00000467052 NESP48681 1621 aa27.96■■■□□ 2.07
COL15A1-202ENST00000467052 SMARCA4P51532 1647 aa27.9■■■□□ 2.06
COL15A1-202ENST00000467052 LAMC3Q9Y6N6 1575 aa27.79■■■□□ 2.04
COL15A1-202ENST00000467052 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
COL15A1-202ENST00000467052 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
COL15A1-202ENST00000467052 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
COL15A1-202ENST00000467052 BAZ1AQ9NRL2 1556 aaPredicted RBP27.64■■■□□ 2.01
COL15A1-202ENST00000467052 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
COL15A1-202ENST00000467052 PDS5BQ9NTI5 1447 aa27.56■■■□□ 2
COL15A1-202ENST00000467052 MRC2Q9UBG0 1479 aa27.4■■□□□ 1.98
COL15A1-202ENST00000467052 WDR62O43379 1518 aa27.39■■□□□ 1.98
COL15A1-202ENST00000467052 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
COL15A1-202ENST00000467052 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
COL15A1-202ENST00000467052 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
COL15A1-202ENST00000467052 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
COL15A1-202ENST00000467052 FANCD2Q9BXW9 1451 aa27.01■■□□□ 1.91
COL15A1-202ENST00000467052 WIZO95785 1651 aa26.99■■□□□ 1.91
COL15A1-202ENST00000467052 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
COL15A1-202ENST00000467052 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
COL15A1-202ENST00000467052 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
COL15A1-202ENST00000467052 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
COL15A1-202ENST00000467052 CFTRP13569 1480 aa26.82■■□□□ 1.88
COL15A1-202ENST00000467052 URB2Q14146 1524 aaKnown RBP26.82■■□□□ 1.88
COL15A1-202ENST00000467052 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
COL15A1-202ENST00000467052 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
COL15A1-202ENST00000467052 IFT140Q96RY7 1462 aa26.62■■□□□ 1.85
COL15A1-202ENST00000467052 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
COL15A1-202ENST00000467052 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
COL15A1-202ENST00000467052 CHD1O14646 1710 aa26.56■■□□□ 1.84
COL15A1-202ENST00000467052 TRHP20396 242 aaPredicted RBP26.47■■□□□ 1.83
COL15A1-202ENST00000467052 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
COL15A1-202ENST00000467052 ARAP1Q96P48 1450 aa26.43■■□□□ 1.82
COL15A1-202ENST00000467052 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
COL15A1-202ENST00000467052 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
COL15A1-202ENST00000467052 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
COL15A1-202ENST00000467052 DNMBPQ6XZF7 1577 aa26.34■■□□□ 1.81
COL15A1-202ENST00000467052 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
COL15A1-202ENST00000467052 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
COL15A1-202ENST00000467052 AQRO60306 1485 aaKnown RBP eCLIP26.21■■□□□ 1.79
COL15A1-202ENST00000467052 CCDC88BA6NC98 1476 aa26.2■■□□□ 1.78
COL15A1-202ENST00000467052 FBLN2P98095 1184 aa26.18■■□□□ 1.78
COL15A1-202ENST00000467052 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
COL15A1-202ENST00000467052 POLA1P09884 1462 aaPredicted RBP26.11■■□□□ 1.77
COL15A1-202ENST00000467052 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
COL15A1-202ENST00000467052 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
COL15A1-202ENST00000467052 SNAPC4Q5SXM2 1469 aa26.03■■□□□ 1.76
COL15A1-202ENST00000467052 MAGI1Q96QZ7 1491 aaPredicted RBP25.96■■□□□ 1.75
COL15A1-202ENST00000467052 RAD54L2Q9Y4B4 1467 aa25.96■■□□□ 1.75
COL15A1-202ENST00000467052 SOGA1O94964 1423 aa25.91■■□□□ 1.74
COL15A1-202ENST00000467052 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
COL15A1-202ENST00000467052 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
COL15A1-202ENST00000467052 CHMP7Q8WUX9 453 aaPredicted RBP25.87■■□□□ 1.73
COL15A1-202ENST00000467052 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
COL15A1-202ENST00000467052 GAPVD1Q14C86 1478 aa25.85■■□□□ 1.73
COL15A1-202ENST00000467052 FGD5Q6ZNL6 1462 aa25.85■■□□□ 1.73
COL15A1-202ENST00000467052 GRIN2BQ13224 1484 aa25.84■■□□□ 1.73
COL15A1-202ENST00000467052 CUX1P39880 1505 aa25.69■■□□□ 1.7
COL15A1-202ENST00000467052 KIF13AQ9H1H9 1805 aa25.64■■□□□ 1.7
COL15A1-202ENST00000467052 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
COL15A1-202ENST00000467052 ERCC6L2Q5T890 1561 aa25.6■■□□□ 1.69
COL15A1-202ENST00000467052 CEP170Q5SW79 1584 aa25.55■■□□□ 1.68
COL15A1-202ENST00000467052 GRIN2AQ12879 1464 aa25.53■■□□□ 1.68
COL15A1-202ENST00000467052 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
COL15A1-202ENST00000467052 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
COL15A1-202ENST00000467052 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
COL15A1-202ENST00000467052 NUP160Q12769 1436 aa25.43■■□□□ 1.66
COL15A1-202ENST00000467052 KDM6BO15054 1643 aa25.28■■□□□ 1.64
COL15A1-202ENST00000467052 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
COL15A1-202ENST00000467052 DIP2BQ9P265 1576 aa25.27■■□□□ 1.64
COL15A1-202ENST00000467052 ABCC10Q5T3U5 1492 aa25.26■■□□□ 1.63
COL15A1-202ENST00000467052 MAPKBP1O60336 1514 aa25.25■■□□□ 1.63
COL15A1-202ENST00000467052 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
COL15A1-202ENST00000467052 ERICH3Q5RHP9 1530 aa25.22■■□□□ 1.63
COL15A1-202ENST00000467052 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms