RNA–Protein interactions for RNA: ENST00000466777.1

TNFSF10-204, Transcript of TNF superfamily member 10, humanhuman

TSL 1 (best)

Gene TNFSF10, Length 1,326 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-204ENST00000466777 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
TNFSF10-204ENST00000466777 CCDC180Q9P1Z9 1646 aa31.59■■■□□ 2.65
TNFSF10-204ENST00000466777 ABCC9O60706 1549 aa30.84■■■□□ 2.53
TNFSF10-204ENST00000466777 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
TNFSF10-204ENST00000466777 NACADO15069 1562 aa29.68■■■□□ 2.34
TNFSF10-204ENST00000466777 DCAF8L2P0C7V8 631 aa29.63■■■□□ 2.33
TNFSF10-204ENST00000466777 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
TNFSF10-204ENST00000466777 MYO15BQ96JP2 1530 aa29.53■■■□□ 2.32
TNFSF10-204ENST00000466777 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
TNFSF10-204ENST00000466777 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
TNFSF10-204ENST00000466777 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
TNFSF10-204ENST00000466777 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
TNFSF10-204ENST00000466777 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
TNFSF10-204ENST00000466777 SHROOM4Q9ULL8 1493 aa28.5■■■□□ 2.15
TNFSF10-204ENST00000466777 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
TNFSF10-204ENST00000466777 EIF4G1Q04637 1599 aaKnown RBP28.04■■■□□ 2.08
TNFSF10-204ENST00000466777 CC2D2AQ9P2K1 1620 aa27.93■■■□□ 2.06
TNFSF10-204ENST00000466777 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
TNFSF10-204ENST00000466777 SMARCA4P51532 1647 aa27.57■■■□□ 2
TNFSF10-204ENST00000466777 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
TNFSF10-204ENST00000466777 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
TNFSF10-204ENST00000466777 NCAPD3P42695 1498 aa27.4■■□□□ 1.98
TNFSF10-204ENST00000466777 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
TNFSF10-204ENST00000466777 SMARCA2P51531 1590 aa27.37■■□□□ 1.97
TNFSF10-204ENST00000466777 PEG3Q9GZU2 1588 aa27.32■■□□□ 1.96
TNFSF10-204ENST00000466777 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
TNFSF10-204ENST00000466777 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
TNFSF10-204ENST00000466777 WIZO95785 1651 aa27.12■■□□□ 1.93
TNFSF10-204ENST00000466777 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
TNFSF10-204ENST00000466777 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
TNFSF10-204ENST00000466777 NESP48681 1621 aa26.72■■□□□ 1.87
TNFSF10-204ENST00000466777 LAMC3Q9Y6N6 1575 aa26.66■■□□□ 1.86
TNFSF10-204ENST00000466777 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
TNFSF10-204ENST00000466777 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
TNFSF10-204ENST00000466777 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
TNFSF10-204ENST00000466777 PDS5BQ9NTI5 1447 aa26.46■■□□□ 1.83
TNFSF10-204ENST00000466777 CFTRP13569 1480 aa26.44■■□□□ 1.82
TNFSF10-204ENST00000466777 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
TNFSF10-204ENST00000466777 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
TNFSF10-204ENST00000466777 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
TNFSF10-204ENST00000466777 CUX2O14529 1486 aa26.28■■□□□ 1.8
TNFSF10-204ENST00000466777 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
TNFSF10-204ENST00000466777 FANCD2Q9BXW9 1451 aa26.27■■□□□ 1.8
TNFSF10-204ENST00000466777 CEP164Q9UPV0 1460 aa26.22■■□□□ 1.79
TNFSF10-204ENST00000466777 MRC2Q9UBG0 1479 aa26.18■■□□□ 1.78
TNFSF10-204ENST00000466777 WDR62O43379 1518 aa26.12■■□□□ 1.77
TNFSF10-204ENST00000466777 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
TNFSF10-204ENST00000466777 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
TNFSF10-204ENST00000466777 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
TNFSF10-204ENST00000466777 DNMBPQ6XZF7 1577 aa25.84■■□□□ 1.73
TNFSF10-204ENST00000466777 CUX1P39880 1505 aa25.7■■□□□ 1.7
TNFSF10-204ENST00000466777 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
TNFSF10-204ENST00000466777 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.7
TNFSF10-204ENST00000466777 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
TNFSF10-204ENST00000466777 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
TNFSF10-204ENST00000466777 ZNF608Q9ULD9 1512 aaPredicted RBP25.58■■□□□ 1.69
TNFSF10-204ENST00000466777 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
TNFSF10-204ENST00000466777 SOGA1O94964 1423 aa25.54■■□□□ 1.68
TNFSF10-204ENST00000466777 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
TNFSF10-204ENST00000466777 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
TNFSF10-204ENST00000466777 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
TNFSF10-204ENST00000466777 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
TNFSF10-204ENST00000466777 EIF4G3O43432 1585 aaKnown RBP25.47■■□□□ 1.67
TNFSF10-204ENST00000466777 DNAJC5Q9H3Z4 198 aa25.46■■□□□ 1.67
TNFSF10-204ENST00000466777 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.66
TNFSF10-204ENST00000466777 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
TNFSF10-204ENST00000466777 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.66
TNFSF10-204ENST00000466777 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
TNFSF10-204ENST00000466777 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
TNFSF10-204ENST00000466777 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
TNFSF10-204ENST00000466777 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
TNFSF10-204ENST00000466777 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
TNFSF10-204ENST00000466777 OSCARQ8IYS5 282 aa25.21■■□□□ 1.63
TNFSF10-204ENST00000466777 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
TNFSF10-204ENST00000466777 CHD1O14646 1710 aa25.17■■□□□ 1.62
TNFSF10-204ENST00000466777 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
TNFSF10-204ENST00000466777 FBLN2P98095 1184 aa25.09■■□□□ 1.61
TNFSF10-204ENST00000466777 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
TNFSF10-204ENST00000466777 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
TNFSF10-204ENST00000466777 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
TNFSF10-204ENST00000466777 ADAMTS12P58397 1594 aa25■■□□□ 1.59
TNFSF10-204ENST00000466777 KIF27Q86VH2 1401 aa24.98■■□□□ 1.59
TNFSF10-204ENST00000466777 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
TNFSF10-204ENST00000466777 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
TNFSF10-204ENST00000466777 IGF1RP08069 1367 aa24.91■■□□□ 1.58
TNFSF10-204ENST00000466777 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
TNFSF10-204ENST00000466777 CLASP1Q7Z460 1538 aa24.89■■□□□ 1.58
TNFSF10-204ENST00000466777 CUL7Q14999 1698 aa24.82■■□□□ 1.56
TNFSF10-204ENST00000466777 RIMBP3CA6NJZ7 1639 aa24.82■■□□□ 1.56
TNFSF10-204ENST00000466777 RIMBP3BA6NNM3 1639 aa24.82■■□□□ 1.56
TNFSF10-204ENST00000466777 RIMBP3Q9UFD9 1639 aa24.82■■□□□ 1.56
TNFSF10-204ENST00000466777 NUP160Q12769 1436 aa24.81■■□□□ 1.56
TNFSF10-204ENST00000466777 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
TNFSF10-204ENST00000466777 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
TNFSF10-204ENST00000466777 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
TNFSF10-204ENST00000466777 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
TNFSF10-204ENST00000466777 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
TNFSF10-204ENST00000466777 SHROOM2Q13796 1616 aa24.64■■□□□ 1.54
TNFSF10-204ENST00000466777 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
TNFSF10-204ENST00000466777 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms