RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 NISCHQ9Y2I1 1504 aa45.19■■■■■ 4.83
CCDC78-207ENST00000466708 CCDC180Q9P1Z9 1646 aa39.17■■■■□ 3.86
CCDC78-207ENST00000466708 ZCCHC6Q5VYS8 1495 aaKnown RBP38.06■■■■□ 3.68
CCDC78-207ENST00000466708 DCAF1Q9Y4B6 1507 aa37.39■■■■□ 3.58
CCDC78-207ENST00000466708 SHROOM4Q9ULL8 1493 aa37.19■■■■□ 3.54
CCDC78-207ENST00000466708 DCAF8L2P0C7V8 631 aa37.17■■■■□ 3.54
CCDC78-207ENST00000466708 MYO15BQ96JP2 1530 aa36.76■■■■□ 3.48
CCDC78-207ENST00000466708 ABCC9O60706 1549 aa36.55■■■■□ 3.44
CCDC78-207ENST00000466708 NACADO15069 1562 aa36.37■■■■□ 3.41
CCDC78-207ENST00000466708 SUPT5HO00267 1087 aaKnown RBP36.08■■■■□ 3.37
CCDC78-207ENST00000466708 SCRIBQ14160 1630 aa36.06■■■■□ 3.36
CCDC78-207ENST00000466708 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
CCDC78-207ENST00000466708 RSF1Q96T23 1441 aaPredicted RBP35.26■■■■□ 3.24
CCDC78-207ENST00000466708 UNC13AQ9UPW8 1703 aa35.2■■■■□ 3.23
CCDC78-207ENST00000466708 CECR2Q9BXF3 1484 aa35.06■■■■□ 3.2
CCDC78-207ENST00000466708 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
CCDC78-207ENST00000466708 BAZ1AQ9NRL2 1556 aaPredicted RBP34.87■■■■□ 3.17
CCDC78-207ENST00000466708 CHIC1Q5VXU3 224 aa34.83■■■■□ 3.17
CCDC78-207ENST00000466708 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
CCDC78-207ENST00000466708 WIZO95785 1651 aa34.66■■■■□ 3.14
CCDC78-207ENST00000466708 SMARCA4P51532 1647 aa34.62■■■■□ 3.13
CCDC78-207ENST00000466708 PABPN1Q86U42 306 aaKnown RBP eCLIP34.59■■■■□ 3.13
CCDC78-207ENST00000466708 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
CCDC78-207ENST00000466708 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
CCDC78-207ENST00000466708 SMARCA2P51531 1590 aa34.01■■■■□ 3.04
CCDC78-207ENST00000466708 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
CCDC78-207ENST00000466708 ATAD2BQ9ULI0 1458 aa33.93■■■■□ 3.02
CCDC78-207ENST00000466708 EIF4G1Q04637 1599 aaKnown RBP33.92■■■■□ 3.02
CCDC78-207ENST00000466708 TRIM41Q8WV44 630 aa33.91■■■■□ 3.02
CCDC78-207ENST00000466708 BAZ1BQ9UIG0 1483 aaKnown RBP33.78■■■■□ 3
CCDC78-207ENST00000466708 NCAPD3P42695 1498 aa33.57■■■□□ 2.96
CCDC78-207ENST00000466708 HMGXB3Q12766 1538 aa33.56■■■□□ 2.96
CCDC78-207ENST00000466708 LOC105371045A0A1W2PR82 267 aa33.49■■■□□ 2.95
CCDC78-207ENST00000466708 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
CCDC78-207ENST00000466708 FAM9AQ8IZU1 332 aaPredicted RBP33.27■■■□□ 2.92
CCDC78-207ENST00000466708 WRNQ14191 1432 aaPredicted RBP eCLIP33.18■■■□□ 2.9
CCDC78-207ENST00000466708 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
CCDC78-207ENST00000466708 EEA1Q15075 1411 aa33.02■■■□□ 2.88
CCDC78-207ENST00000466708 SYNJ1O43426 1573 aa32.99■■■□□ 2.87
CCDC78-207ENST00000466708 CFTRP13569 1480 aa32.97■■■□□ 2.87
CCDC78-207ENST00000466708 SOGA1O94964 1423 aa32.91■■■□□ 2.86
CCDC78-207ENST00000466708 TOP2BQ02880 1626 aa32.85■■■□□ 2.85
CCDC78-207ENST00000466708 PRDM2Q13029 1718 aa32.82■■■□□ 2.84
CCDC78-207ENST00000466708 BIVM-ERCC5R4GMW8 1640 aa32.8■■■□□ 2.84
CCDC78-207ENST00000466708 CSRNP3Q8WYN3 585 aa32.77■■■□□ 2.84
CCDC78-207ENST00000466708 CADPSQ9ULU8 1353 aa32.75■■■□□ 2.83
CCDC78-207ENST00000466708 EHMT2Q96KQ7 1210 aa32.74■■■□□ 2.83
CCDC78-207ENST00000466708 RUSC2Q8N2Y8 1516 aa32.74■■■□□ 2.83
CCDC78-207ENST00000466708 CUX1P39880 1505 aa32.62■■■□□ 2.81
CCDC78-207ENST00000466708 TNIKQ9UKE5 1360 aa32.57■■■□□ 2.8
CCDC78-207ENST00000466708 GOLGA3Q08378 1498 aa32.55■■■□□ 2.8
CCDC78-207ENST00000466708 KIF21BO75037 1637 aa32.52■■■□□ 2.8
CCDC78-207ENST00000466708 PCGF6Q9BYE7 350 aa32.52■■■□□ 2.8
CCDC78-207ENST00000466708 CEP164Q9UPV0 1460 aa32.51■■■□□ 2.8
CCDC78-207ENST00000466708 TRIM26Q12899 539 aaPredicted RBP32.44■■■□□ 2.78
CCDC78-207ENST00000466708 CEP162Q5TB80 1403 aa32.4■■■□□ 2.78
CCDC78-207ENST00000466708 UBTFP17480 764 aaKnown RBP32.4■■■□□ 2.78
CCDC78-207ENST00000466708 FANCD2Q9BXW9 1451 aa32.38■■■□□ 2.77
CCDC78-207ENST00000466708 LAMC3Q9Y6N6 1575 aa32.34■■■□□ 2.77
CCDC78-207ENST00000466708 KIF27Q86VH2 1401 aa32.31■■■□□ 2.76
CCDC78-207ENST00000466708 NESP48681 1621 aa32.25■■■□□ 2.75
CCDC78-207ENST00000466708 ERICH3Q5RHP9 1530 aa32.22■■■□□ 2.75
CCDC78-207ENST00000466708 RAPGEF2Q9Y4G8 1499 aa32.22■■■□□ 2.75
CCDC78-207ENST00000466708 PRXQ9BXM0 1461 aa32.21■■■□□ 2.75
CCDC78-207ENST00000466708 FGD5Q6ZNL6 1462 aa32.19■■■□□ 2.74
CCDC78-207ENST00000466708 DNMBPQ6XZF7 1577 aa32.18■■■□□ 2.74
CCDC78-207ENST00000466708 PDS5BQ9NTI5 1447 aa32.09■■■□□ 2.73
CCDC78-207ENST00000466708 CUX2O14529 1486 aa32.08■■■□□ 2.73
CCDC78-207ENST00000466708 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
CCDC78-207ENST00000466708 DNAJC5BQ9UF47 199 aa32.07■■■□□ 2.73
CCDC78-207ENST00000466708 CLIP1P30622 1438 aa32.05■■■□□ 2.72
CCDC78-207ENST00000466708 HRCP23327 699 aa32.03■■■□□ 2.72
CCDC78-207ENST00000466708 POLA1P09884 1462 aaPredicted RBP31.96■■■□□ 2.71
CCDC78-207ENST00000466708 IGF1RP08069 1367 aa31.96■■■□□ 2.71
CCDC78-207ENST00000466708 ABCA10Q8WWZ4 1543 aa31.93■■■□□ 2.7
CCDC78-207ENST00000466708 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
CCDC78-207ENST00000466708 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
CCDC78-207ENST00000466708 RAD54L2Q9Y4B4 1467 aa31.85■■■□□ 2.69
CCDC78-207ENST00000466708 VPS8Q8N3P4 1428 aa31.85■■■□□ 2.69
CCDC78-207ENST00000466708 PPARGC1BQ86YN6 1023 aaKnown RBP31.84■■■□□ 2.69
CCDC78-207ENST00000466708 CARMIL1Q5VZK9 1371 aa31.82■■■□□ 2.68
CCDC78-207ENST00000466708 WDR97A6NE52 1622 aa31.75■■■□□ 2.67
CCDC78-207ENST00000466708 CUL7Q14999 1698 aa31.67■■■□□ 2.66
CCDC78-207ENST00000466708 RANGAP1P46060 587 aaPredicted RBP31.66■■■□□ 2.66
CCDC78-207ENST00000466708 ARAP1Q96P48 1450 aa31.64■■■□□ 2.66
CCDC78-207ENST00000466708 MRC2Q9UBG0 1479 aa31.63■■■□□ 2.65
CCDC78-207ENST00000466708 ABCA5Q8WWZ7 1642 aa31.61■■■□□ 2.65
CCDC78-207ENST00000466708 APLP2Q06481 763 aa31.59■■■□□ 2.65
CCDC78-207ENST00000466708 TARBP1Q13395 1621 aaKnown RBP31.56■■■□□ 2.64
CCDC78-207ENST00000466708 ARHGAP35Q9NRY4 1499 aa31.55■■■□□ 2.64
CCDC78-207ENST00000466708 GAPVD1Q14C86 1478 aa31.54■■■□□ 2.64
CCDC78-207ENST00000466708 TDRD9Q8NDG6 1382 aaKnown RBP31.51■■■□□ 2.63
CCDC78-207ENST00000466708 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
CCDC78-207ENST00000466708 ZEB1P37275 1124 aaPredicted RBP31.45■■■□□ 2.62
CCDC78-207ENST00000466708 WDR62O43379 1518 aa31.43■■■□□ 2.62
CCDC78-207ENST00000466708 CTTNBP2Q8WZ74 1663 aa31.38■■■□□ 2.61
CCDC78-207ENST00000466708 IFT140Q96RY7 1462 aa31.34■■■□□ 2.61
CCDC78-207ENST00000466708 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
CCDC78-207ENST00000466708 EFCAB5A4FU69 1503 aa31.31■■■□□ 2.6
CCDC78-207ENST00000466708 PBRM1Q86U86 1689 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms