RNA–Protein interactions for RNA: ENST00000466645.5

PMM1-204, Transcript of phosphomannomutase 1, humanhuman

TSL 4

Gene PMM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-204ENST00000466645 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
PMM1-204ENST00000466645 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
PMM1-204ENST00000466645 ABCC9O60706 1549 aa28.55■■■□□ 2.16
PMM1-204ENST00000466645 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
PMM1-204ENST00000466645 NACADO15069 1562 aa27.51■■□□□ 1.99
PMM1-204ENST00000466645 ZCCHC6Q5VYS8 1495 aaKnown RBP27.46■■□□□ 1.99
PMM1-204ENST00000466645 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
PMM1-204ENST00000466645 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
PMM1-204ENST00000466645 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
PMM1-204ENST00000466645 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
PMM1-204ENST00000466645 SCRIBQ14160 1630 aa26.74■■□□□ 1.87
PMM1-204ENST00000466645 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
PMM1-204ENST00000466645 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
PMM1-204ENST00000466645 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
PMM1-204ENST00000466645 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
PMM1-204ENST00000466645 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
PMM1-204ENST00000466645 CC2D2AQ9P2K1 1620 aa25.88■■□□□ 1.73
PMM1-204ENST00000466645 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
PMM1-204ENST00000466645 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
PMM1-204ENST00000466645 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
PMM1-204ENST00000466645 SMARCA2P51531 1590 aa25.38■■□□□ 1.65
PMM1-204ENST00000466645 MROH2BQ7Z745 1585 aa25.38■■□□□ 1.65
PMM1-204ENST00000466645 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
PMM1-204ENST00000466645 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
PMM1-204ENST00000466645 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
PMM1-204ENST00000466645 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
PMM1-204ENST00000466645 BAZ1BQ9UIG0 1483 aaKnown RBP25.18■■□□□ 1.62
PMM1-204ENST00000466645 WIZO95785 1651 aa25.16■■□□□ 1.62
PMM1-204ENST00000466645 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
PMM1-204ENST00000466645 TOP2AP11388 1531 aaKnown RBP24.87■■□□□ 1.57
PMM1-204ENST00000466645 NESP48681 1621 aa24.74■■□□□ 1.55
PMM1-204ENST00000466645 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
PMM1-204ENST00000466645 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
PMM1-204ENST00000466645 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
PMM1-204ENST00000466645 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
PMM1-204ENST00000466645 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
PMM1-204ENST00000466645 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
PMM1-204ENST00000466645 CFTRP13569 1480 aa24.48■■□□□ 1.51
PMM1-204ENST00000466645 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
PMM1-204ENST00000466645 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
PMM1-204ENST00000466645 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
PMM1-204ENST00000466645 CUX2O14529 1486 aa24.35■■□□□ 1.49
PMM1-204ENST00000466645 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
PMM1-204ENST00000466645 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
PMM1-204ENST00000466645 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
PMM1-204ENST00000466645 WDR62O43379 1518 aa24.21■■□□□ 1.47
PMM1-204ENST00000466645 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
PMM1-204ENST00000466645 DNMBPQ6XZF7 1577 aa23.97■■□□□ 1.43
PMM1-204ENST00000466645 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
PMM1-204ENST00000466645 ABCC8Q09428 1581 aa23.95■■□□□ 1.43
PMM1-204ENST00000466645 CUX1P39880 1505 aa23.81■■□□□ 1.4
PMM1-204ENST00000466645 IFT140Q96RY7 1462 aa23.79■■□□□ 1.4
PMM1-204ENST00000466645 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
PMM1-204ENST00000466645 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
PMM1-204ENST00000466645 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
PMM1-204ENST00000466645 BIVM-ERCC5R4GMW8 1640 aa23.68■■□□□ 1.38
PMM1-204ENST00000466645 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
PMM1-204ENST00000466645 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
PMM1-204ENST00000466645 TOP2BQ02880 1626 aa23.65■■□□□ 1.38
PMM1-204ENST00000466645 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.389e-6■■■■■ 50.1
PMM1-204ENST00000466645 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
PMM1-204ENST00000466645 RAD54L2Q9Y4B4 1467 aa23.64■■□□□ 1.38
PMM1-204ENST00000466645 SOGA1O94964 1423 aa23.62■■□□□ 1.37
PMM1-204ENST00000466645 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
PMM1-204ENST00000466645 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.361e-7■■■■■ 37.4
PMM1-204ENST00000466645 ABCA10Q8WWZ4 1543 aa23.49■■□□□ 1.35
PMM1-204ENST00000466645 TDRD9Q8NDG6 1382 aaKnown RBP23.48■■□□□ 1.35
PMM1-204ENST00000466645 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
PMM1-204ENST00000466645 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
PMM1-204ENST00000466645 ABCA5Q8WWZ7 1642 aa23.45■■□□□ 1.34
PMM1-204ENST00000466645 CHD1O14646 1710 aa23.39■■□□□ 1.34
PMM1-204ENST00000466645 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
PMM1-204ENST00000466645 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
PMM1-204ENST00000466645 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
PMM1-204ENST00000466645 MAGI1Q96QZ7 1491 aaPredicted RBP23.32■■□□□ 1.32
PMM1-204ENST00000466645 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
PMM1-204ENST00000466645 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
PMM1-204ENST00000466645 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
PMM1-204ENST00000466645 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
PMM1-204ENST00000466645 FBLN2P98095 1184 aa23.18■■□□□ 1.3
PMM1-204ENST00000466645 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
PMM1-204ENST00000466645 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
PMM1-204ENST00000466645 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
PMM1-204ENST00000466645 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
PMM1-204ENST00000466645 CLASP1Q7Z460 1538 aa23.08■■□□□ 1.28
PMM1-204ENST00000466645 CUL7Q14999 1698 aa23.07■■□□□ 1.28
PMM1-204ENST00000466645 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
PMM1-204ENST00000466645 IGF1RP08069 1367 aa23.01■■□□□ 1.27
PMM1-204ENST00000466645 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
PMM1-204ENST00000466645 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
PMM1-204ENST00000466645 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
PMM1-204ENST00000466645 CEP170Q5SW79 1584 aa23■■□□□ 1.27
PMM1-204ENST00000466645 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
PMM1-204ENST00000466645 NUP160Q12769 1436 aa22.98■■□□□ 1.27
PMM1-204ENST00000466645 RUSC2Q8N2Y8 1516 aa22.95■■□□□ 1.26
PMM1-204ENST00000466645 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
PMM1-204ENST00000466645 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
PMM1-204ENST00000466645 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
PMM1-204ENST00000466645 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
PMM1-204ENST00000466645 RAPGEF2Q9Y4G8 1499 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms