RNA–Protein interactions for RNA: ENST00000466089.5

LINC00879-203, long intergenic non-protein coding RNA 879, humanhuman

TSL 3

Gene LINC00879, Length 631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-203ENST00000466089 NISCHQ9Y2I1 1504 aa30.05■■■□□ 2.4
LINC00879-203ENST00000466089 ABCC9O60706 1549 aa27.26■■□□□ 1.96
LINC00879-203ENST00000466089 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
LINC00879-203ENST00000466089 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
LINC00879-203ENST00000466089 DNAJC5BQ9UF47 199 aa25.7■■□□□ 1.7
LINC00879-203ENST00000466089 NACADO15069 1562 aa25.61■■□□□ 1.69
LINC00879-203ENST00000466089 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
LINC00879-203ENST00000466089 PABPN1Q86U42 306 aaKnown RBP eCLIP25.35■■□□□ 1.65
LINC00879-203ENST00000466089 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
LINC00879-203ENST00000466089 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
LINC00879-203ENST00000466089 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
LINC00879-203ENST00000466089 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
LINC00879-203ENST00000466089 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
LINC00879-203ENST00000466089 SHROOM4Q9ULL8 1493 aa24.74■■□□□ 1.55
LINC00879-203ENST00000466089 SCRIBQ14160 1630 aa24.66■■□□□ 1.54
LINC00879-203ENST00000466089 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
LINC00879-203ENST00000466089 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.52
LINC00879-203ENST00000466089 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
LINC00879-203ENST00000466089 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
LINC00879-203ENST00000466089 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
LINC00879-203ENST00000466089 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
LINC00879-203ENST00000466089 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
LINC00879-203ENST00000466089 CUX2O14529 1486 aa23.56■■□□□ 1.36
LINC00879-203ENST00000466089 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
LINC00879-203ENST00000466089 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
LINC00879-203ENST00000466089 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
LINC00879-203ENST00000466089 HMGXB3Q12766 1538 aa23.47■■□□□ 1.35
LINC00879-203ENST00000466089 NESP48681 1621 aa23.35■■□□□ 1.33
LINC00879-203ENST00000466089 BAZ1AQ9NRL2 1556 aaPredicted RBP23.35■■□□□ 1.33
LINC00879-203ENST00000466089 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
LINC00879-203ENST00000466089 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
LINC00879-203ENST00000466089 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
LINC00879-203ENST00000466089 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
LINC00879-203ENST00000466089 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.29
LINC00879-203ENST00000466089 PDS5BQ9NTI5 1447 aa23.04■■□□□ 1.28
LINC00879-203ENST00000466089 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
LINC00879-203ENST00000466089 CADPSQ9ULU8 1353 aa22.93■■□□□ 1.26
LINC00879-203ENST00000466089 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
LINC00879-203ENST00000466089 WIZO95785 1651 aa22.85■■□□□ 1.25
LINC00879-203ENST00000466089 WDR62O43379 1518 aa22.79■■□□□ 1.24
LINC00879-203ENST00000466089 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
LINC00879-203ENST00000466089 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
LINC00879-203ENST00000466089 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
LINC00879-203ENST00000466089 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
LINC00879-203ENST00000466089 CFTRP13569 1480 aa22.63■■□□□ 1.21
LINC00879-203ENST00000466089 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
LINC00879-203ENST00000466089 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
LINC00879-203ENST00000466089 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
LINC00879-203ENST00000466089 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
LINC00879-203ENST00000466089 PRDM2Q13029 1718 aa22.34■■□□□ 1.17
LINC00879-203ENST00000466089 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
LINC00879-203ENST00000466089 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
LINC00879-203ENST00000466089 ZNF608Q9ULD9 1512 aaPredicted RBP22.26■■□□□ 1.15
LINC00879-203ENST00000466089 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
LINC00879-203ENST00000466089 RIMBP3CA6NJZ7 1639 aa22.17■■□□□ 1.14
LINC00879-203ENST00000466089 RIMBP3BA6NNM3 1639 aa22.17■■□□□ 1.14
LINC00879-203ENST00000466089 RIMBP3Q9UFD9 1639 aa22.17■■□□□ 1.14
LINC00879-203ENST00000466089 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
LINC00879-203ENST00000466089 EIF4G3O43432 1585 aaKnown RBP22.12■■□□□ 1.13
LINC00879-203ENST00000466089 DNMBPQ6XZF7 1577 aa22.12■■□□□ 1.13
LINC00879-203ENST00000466089 ARHGEF11O15085 1522 aa22.1■■□□□ 1.13
LINC00879-203ENST00000466089 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
LINC00879-203ENST00000466089 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
LINC00879-203ENST00000466089 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
LINC00879-203ENST00000466089 CHD1O14646 1710 aa21.96■■□□□ 1.11
LINC00879-203ENST00000466089 FBLN2P98095 1184 aa21.95■■□□□ 1.1
LINC00879-203ENST00000466089 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
LINC00879-203ENST00000466089 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
LINC00879-203ENST00000466089 SOGA1O94964 1423 aa21.89■■□□□ 1.09
LINC00879-203ENST00000466089 TDRD9Q8NDG6 1382 aaKnown RBP21.88■■□□□ 1.09
LINC00879-203ENST00000466089 ARAP1Q96P48 1450 aa21.88■■□□□ 1.09
LINC00879-203ENST00000466089 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
LINC00879-203ENST00000466089 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
LINC00879-203ENST00000466089 WDR97A6NE52 1622 aa21.79■■□□□ 1.08
LINC00879-203ENST00000466089 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
LINC00879-203ENST00000466089 CUX1P39880 1505 aa21.78■■□□□ 1.08
LINC00879-203ENST00000466089 CHMP7Q8WUX9 453 aaPredicted RBP21.74■■□□□ 1.07
LINC00879-203ENST00000466089 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
LINC00879-203ENST00000466089 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
LINC00879-203ENST00000466089 GRIN2BQ13224 1484 aa21.72■■□□□ 1.07
LINC00879-203ENST00000466089 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
LINC00879-203ENST00000466089 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
LINC00879-203ENST00000466089 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
LINC00879-203ENST00000466089 PBRM1Q86U86 1689 aa21.59■■□□□ 1.05
LINC00879-203ENST00000466089 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
LINC00879-203ENST00000466089 ABCA5Q8WWZ7 1642 aa21.54■■□□□ 1.04
LINC00879-203ENST00000466089 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
LINC00879-203ENST00000466089 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
LINC00879-203ENST00000466089 GRIN2AQ12879 1464 aa21.45■■□□□ 1.02
LINC00879-203ENST00000466089 ADAMTS12P58397 1594 aa21.41■■□□□ 1.02
LINC00879-203ENST00000466089 NUP160Q12769 1436 aa21.38■■□□□ 1.01
LINC00879-203ENST00000466089 ERCC6L2Q5T890 1561 aa21.38■■□□□ 1.01
LINC00879-203ENST00000466089 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
LINC00879-203ENST00000466089 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
LINC00879-203ENST00000466089 BIVM-ERCC5R4GMW8 1640 aa21.35■■□□□ 1.01
LINC00879-203ENST00000466089 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
LINC00879-203ENST00000466089 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
LINC00879-203ENST00000466089 SHROOM2Q13796 1616 aa21.27■■□□□ 1
LINC00879-203ENST00000466089 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
LINC00879-203ENST00000466089 JPH4Q96JJ6 628 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms