RNA–Protein interactions for RNA: ENST00000466051.1

PRELID3B-204, Transcript of PRELI domain containing 3B, humanhuman

TSL 2

Gene PRELID3B, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRELID3B-204ENST00000466051 NISCHQ9Y2I1 1504 aa36.07■■■■□ 3.36
PRELID3B-204ENST00000466051 ABCC9O60706 1549 aa33.78■■■■□ 3
PRELID3B-204ENST00000466051 CCDC180Q9P1Z9 1646 aa32.79■■■□□ 2.84
PRELID3B-204ENST00000466051 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
PRELID3B-204ENST00000466051 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
PRELID3B-204ENST00000466051 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
PRELID3B-204ENST00000466051 NACADO15069 1562 aa31.22■■■□□ 2.59
PRELID3B-204ENST00000466051 UNC13AQ9UPW8 1703 aa30.97■■■□□ 2.55
PRELID3B-204ENST00000466051 DCAF8L2P0C7V8 631 aa30.96■■■□□ 2.55
PRELID3B-204ENST00000466051 BICRAQ9NZM4 1560 aa30.77■■■□□ 2.52
PRELID3B-204ENST00000466051 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
PRELID3B-204ENST00000466051 DNAJC5Q9H3Z4 198 aa30.51■■■□□ 2.47
PRELID3B-204ENST00000466051 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
PRELID3B-204ENST00000466051 MYO15BQ96JP2 1530 aa30.42■■■□□ 2.46
PRELID3B-204ENST00000466051 SHROOM4Q9ULL8 1493 aa30.25■■■□□ 2.43
PRELID3B-204ENST00000466051 EIF4G1Q04637 1599 aaKnown RBP30.13■■■□□ 2.41
PRELID3B-204ENST00000466051 SCRIBQ14160 1630 aa29.89■■■□□ 2.38
PRELID3B-204ENST00000466051 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
PRELID3B-204ENST00000466051 DCAF1Q9Y4B6 1507 aa29.69■■■□□ 2.34
PRELID3B-204ENST00000466051 CUX2O14529 1486 aa29.47■■■□□ 2.31
PRELID3B-204ENST00000466051 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
PRELID3B-204ENST00000466051 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
PRELID3B-204ENST00000466051 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
PRELID3B-204ENST00000466051 NESP48681 1621 aa28.73■■■□□ 2.19
PRELID3B-204ENST00000466051 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
PRELID3B-204ENST00000466051 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
PRELID3B-204ENST00000466051 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
PRELID3B-204ENST00000466051 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
PRELID3B-204ENST00000466051 SMARCA4P51532 1647 aa28.37■■■□□ 2.13
PRELID3B-204ENST00000466051 LAMC3Q9Y6N6 1575 aa28.35■■■□□ 2.13
PRELID3B-204ENST00000466051 KIF21AQ7Z4S6 1674 aa28.34■■■□□ 2.13
PRELID3B-204ENST00000466051 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
PRELID3B-204ENST00000466051 PDS5BQ9NTI5 1447 aa28.24■■■□□ 2.11
PRELID3B-204ENST00000466051 BAZ1AQ9NRL2 1556 aaPredicted RBP28.1■■■□□ 2.09
PRELID3B-204ENST00000466051 MRC2Q9UBG0 1479 aa28.07■■■□□ 2.08
PRELID3B-204ENST00000466051 PEG3Q9GZU2 1588 aa28.05■■■□□ 2.08
PRELID3B-204ENST00000466051 WDR62O43379 1518 aa28■■■□□ 2.07
PRELID3B-204ENST00000466051 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
PRELID3B-204ENST00000466051 CADPSQ9ULU8 1353 aa27.91■■■□□ 2.06
PRELID3B-204ENST00000466051 MROH2BQ7Z745 1585 aa27.8■■■□□ 2.04
PRELID3B-204ENST00000466051 CEP164Q9UPV0 1460 aa27.77■■■□□ 2.04
PRELID3B-204ENST00000466051 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
PRELID3B-204ENST00000466051 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
PRELID3B-204ENST00000466051 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
PRELID3B-204ENST00000466051 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
PRELID3B-204ENST00000466051 ARHGEF11O15085 1522 aa27.54■■■□□ 2
PRELID3B-204ENST00000466051 TRHP20396 242 aaPredicted RBP27.47■■□□□ 1.99
PRELID3B-204ENST00000466051 URB2Q14146 1524 aaKnown RBP27.46■■□□□ 1.99
PRELID3B-204ENST00000466051 WIZO95785 1651 aa27.44■■□□□ 1.98
PRELID3B-204ENST00000466051 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
PRELID3B-204ENST00000466051 CFTRP13569 1480 aa27.39■■□□□ 1.98
PRELID3B-204ENST00000466051 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.98
PRELID3B-204ENST00000466051 ZNF608Q9ULD9 1512 aaPredicted RBP27.29■■□□□ 1.96
PRELID3B-204ENST00000466051 IFT140Q96RY7 1462 aa27.23■■□□□ 1.95
PRELID3B-204ENST00000466051 ARAP1Q96P48 1450 aa27.2■■□□□ 1.95
PRELID3B-204ENST00000466051 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
PRELID3B-204ENST00000466051 CHD1O14646 1710 aa27.09■■□□□ 1.93
PRELID3B-204ENST00000466051 PRDM2Q13029 1718 aa27.07■■□□□ 1.92
PRELID3B-204ENST00000466051 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
PRELID3B-204ENST00000466051 TOP2AP11388 1531 aaKnown RBP27.01■■□□□ 1.91
PRELID3B-204ENST00000466051 FBLN2P98095 1184 aa27■■□□□ 1.91
PRELID3B-204ENST00000466051 TOPBP1Q92547 1522 aa27■■□□□ 1.91
PRELID3B-204ENST00000466051 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.92e-10■■■■■ 50.3
PRELID3B-204ENST00000466051 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
PRELID3B-204ENST00000466051 DNMBPQ6XZF7 1577 aa26.82■■□□□ 1.88
PRELID3B-204ENST00000466051 TARBP1Q13395 1621 aaKnown RBP26.81■■□□□ 1.88
PRELID3B-204ENST00000466051 CLASP1Q7Z460 1538 aa26.71■■□□□ 1.87
PRELID3B-204ENST00000466051 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
PRELID3B-204ENST00000466051 POLA1P09884 1462 aaPredicted RBP26.66■■□□□ 1.86
PRELID3B-204ENST00000466051 SYNJ1O43426 1573 aa26.65■■□□□ 1.86
PRELID3B-204ENST00000466051 SNAPC4Q5SXM2 1469 aa26.64■■□□□ 1.86
PRELID3B-204ENST00000466051 TDRD9Q8NDG6 1382 aaKnown RBP26.6■■□□□ 1.85
PRELID3B-204ENST00000466051 CHMP7Q8WUX9 453 aaPredicted RBP26.6■■□□□ 1.85
PRELID3B-204ENST00000466051 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
PRELID3B-204ENST00000466051 GAPVD1Q14C86 1478 aa26.53■■□□□ 1.84
PRELID3B-204ENST00000466051 SOGA1O94964 1423 aa26.52■■□□□ 1.84
PRELID3B-204ENST00000466051 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
PRELID3B-204ENST00000466051 WDR97A6NE52 1622 aa26.47■■□□□ 1.83
PRELID3B-204ENST00000466051 SYNJ2O15056 1496 aa26.43■■□□□ 1.82
PRELID3B-204ENST00000466051 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
PRELID3B-204ENST00000466051 FGD5Q6ZNL6 1462 aa26.37■■□□□ 1.81
PRELID3B-204ENST00000466051 ILDR1Q86SU0 546 aaPredicted RBP26.27■■□□□ 1.8
PRELID3B-204ENST00000466051 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
PRELID3B-204ENST00000466051 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
PRELID3B-204ENST00000466051 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
PRELID3B-204ENST00000466051 CUX1P39880 1505 aa26.18■■□□□ 1.78
PRELID3B-204ENST00000466051 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
PRELID3B-204ENST00000466051 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
PRELID3B-204ENST00000466051 ABCA5Q8WWZ7 1642 aa26.05■■□□□ 1.76
PRELID3B-204ENST00000466051 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
PRELID3B-204ENST00000466051 FAM69CQ0P6D2 419 aa25.99■■□□□ 1.75
PRELID3B-204ENST00000466051 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
PRELID3B-204ENST00000466051 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
PRELID3B-204ENST00000466051 NUP160Q12769 1436 aa25.98■■□□□ 1.75
PRELID3B-204ENST00000466051 ADAMTS12P58397 1594 aa25.95■■□□□ 1.74
PRELID3B-204ENST00000466051 ABCC10Q5T3U5 1492 aa25.92■■□□□ 1.74
PRELID3B-204ENST00000466051 KDM6BO15054 1643 aa25.92■■□□□ 1.74
PRELID3B-204ENST00000466051 PRG4Q92954 1404 aaPredicted RBP25.86■■□□□ 1.73
PRELID3B-204ENST00000466051 DIP2BQ9P265 1576 aa25.86■■□□□ 1.73
PRELID3B-204ENST00000466051 NPM1P06748 294 aaKnown RBP eCLIP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms